Protein–RNA interactions for Protein: Q8TD31

CCHCR1, Coiled-coil alpha-helical rod protein 1, humanhuman

Predictions only

Length 782 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCHCR1Q8TD31 CCM2-207ENST00000475551 2471 ntAPPRIS ALT2 TSL 2 BASIC19.38■□□□□ 0.69
CCHCR1Q8TD31 MRPL2-207ENST00000487429 905 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
CCHCR1Q8TD31 DOK7-203ENST00000507039 2551 ntTSL 2 BASIC19.38■□□□□ 0.69
CCHCR1Q8TD31 CXCL2-202ENST00000508487 1218 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
CCHCR1Q8TD31 BAALC-AS1-207ENST00000522856 594 ntTSL 3 BASIC19.38■□□□□ 0.69
CCHCR1Q8TD31 LONRF1-208ENST00000533751 3043 ntTSL 5 BASIC19.38■□□□□ 0.69
CCHCR1Q8TD31 DYNLL1-209ENST00000550845 1376 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
CCHCR1Q8TD31 TMEM235-204ENST00000551068 1187 ntAPPRIS P1 TSL 5 BASIC19.38■□□□□ 0.69
CCHCR1Q8TD31 AC126763.1-201ENST00000552015 2118 ntBASIC19.38■□□□□ 0.69
CCHCR1Q8TD31 CD177P1-201ENST00000606252 935 ntBASIC19.38■□□□□ 0.69
CCHCR1Q8TD31 RNFT2-209ENST00000622220 2176 ntTSL 5 BASIC19.38■□□□□ 0.69
CCHCR1Q8TD31 AC004816.2-201ENST00000622856 284 ntTSL 5 BASIC19.38■□□□□ 0.69
CCHCR1Q8TD31 ZNF865-201ENST00000568956 4005 ntAPPRIS P1 TSL 2 BASIC19.38■□□□□ 0.69
CCHCR1Q8TD31 DENND2A-201ENST00000275884 3735 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
CCHCR1Q8TD31 PIF1-205ENST00000559239 2677 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
CCHCR1Q8TD31 TBXAS1-204ENST00000416849 2505 ntTSL 5 BASIC19.38■□□□□ 0.69
CCHCR1Q8TD31 CAMKK2-207ENST00000404169 2116 ntAPPRIS P4 TSL 1 (best) BASIC19.37■□□□□ 0.69
CCHCR1Q8TD31 SALRNA1-201ENST00000555871 2086 ntTSL 4 BASIC19.37■□□□□ 0.69
CCHCR1Q8TD31 HOXC11-201ENST00000243082 2039 ntTSL 3 BASIC19.37■□□□□ 0.69
CCHCR1Q8TD31 CERS4-201ENST00000251363 1797 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
CCHCR1Q8TD31 UBE2E3-209ENST00000602710 1556 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
CCHCR1Q8TD31 FBXW11-202ENST00000296933 4539 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
CCHCR1Q8TD31 CARHSP1-219ENST00000618335 2972 ntAPPRIS P1 TSL 4 BASIC19.37■□□□□ 0.69
CCHCR1Q8TD31 DISP3-202ENST00000304391 1495 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
CCHCR1Q8TD31 PIGH-201ENST00000216452 1420 ntAPPRIS P2 TSL 1 (best) BASIC19.37■□□□□ 0.69
CCHCR1Q8TD31 GTF3A-201ENST00000381140 1383 ntAPPRIS ALT2 TSL 1 (best) BASIC19.37■□□□□ 0.69
CCHCR1Q8TD31 EDA-208ENST00000524573 1381 ntAPPRIS ALT1 TSL 1 (best) BASIC19.37■□□□□ 0.69
CCHCR1Q8TD31 TXNL1-211ENST00000590954 1339 ntAPPRIS P1 TSL 2 BASIC19.37■□□□□ 0.69
CCHCR1Q8TD31 CLDND2-201ENST00000291715 974 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
CCHCR1Q8TD31 IGHV3-73-201ENST00000390636 437 ntAPPRIS P1 BASIC19.37■□□□□ 0.69
CCHCR1Q8TD31 CDKN1B-202ENST00000396340 897 ntTSL 3 BASIC19.37■□□□□ 0.69
CCHCR1Q8TD31 HLX-AS1-201ENST00000552026 563 ntTSL 4 BASIC19.37■□□□□ 0.69
CCHCR1Q8TD31 LINC02167-201ENST00000562769 594 ntTSL 3 BASIC19.37■□□□□ 0.69
CCHCR1Q8TD31 AC097641.1-201ENST00000580671 588 ntTSL 4 BASIC19.37■□□□□ 0.69
CCHCR1Q8TD31 CROCCP4-202ENST00000633627 573 ntTSL 3 BASIC19.37■□□□□ 0.69
CCHCR1Q8TD31 ARHGEF28-203ENST00000426542 6118 ntAPPRIS ALT2 TSL 1 (best) BASIC19.37■□□□□ 0.69
CCHCR1Q8TD31 PKMYT1-203ENST00000431515 2308 ntTSL 2 BASIC19.37■□□□□ 0.69
CCHCR1Q8TD31 ADGRA3-202ENST00000334304 4566 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
CCHCR1Q8TD31 NSMAF-202ENST00000427130 3371 ntTSL 2 BASIC19.37■□□□□ 0.69
CCHCR1Q8TD31 NFATC1-210ENST00000587635 2195 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
CCHCR1Q8TD31 PTTG1IP-201ENST00000330938 2760 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
CCHCR1Q8TD31 MAP6-201ENST00000304771 3334 ntAPPRIS P3 TSL 1 (best) BASIC19.36■□□□□ 0.69
CCHCR1Q8TD31 CPAMD8-203ENST00000443236 5992 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
CCHCR1Q8TD31 SKOR1-203ENST00000554054 3620 ntAPPRIS ALT2 TSL 5 BASIC19.36■□□□□ 0.69
CCHCR1Q8TD31 SPNS3-201ENST00000355530 2133 ntAPPRIS P1 TSL 2 BASIC19.36■□□□□ 0.69
CCHCR1Q8TD31 SGSM2-201ENST00000268989 4863 ntAPPRIS P3 TSL 1 (best) BASIC19.36■□□□□ 0.69
CCHCR1Q8TD31 AC127496.1-202ENST00000573602 2091 ntTSL 2 BASIC19.36■□□□□ 0.69
CCHCR1Q8TD31 ITGA7-201ENST00000257879 4120 ntAPPRIS P3 TSL 1 (best) BASIC19.36■□□□□ 0.69
CCHCR1Q8TD31 CSF1-203ENST00000369801 1364 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
CCHCR1Q8TD31 CALML5-201ENST00000380332 859 ntAPPRIS P1 BASIC19.36■□□□□ 0.69
CCHCR1Q8TD31 FAM197Y1-201ENST00000421178 764 ntBASIC19.36■□□□□ 0.69
CCHCR1Q8TD31 NME6-209ENST00000442597 757 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
CCHCR1Q8TD31 PAIP2-208ENST00000511706 468 ntTSL 5 BASIC19.36■□□□□ 0.69
CCHCR1Q8TD31 AMN1-211ENST00000541931 880 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
CCHCR1Q8TD31 UBALD1-209ENST00000591897 1275 ntTSL 2 BASIC19.36■□□□□ 0.69
CCHCR1Q8TD31 AC113410.3-201ENST00000623366 203 ntBASIC19.36■□□□□ 0.69
CCHCR1Q8TD31 AC068587.9-201ENST00000641814 219 ntBASIC19.36■□□□□ 0.69
CCHCR1Q8TD31 AL031985.4-201ENST00000642138 673 ntBASIC19.36■□□□□ 0.69
CCHCR1Q8TD31 GTF2IP4-202ENST00000544802 3609 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
CCHCR1Q8TD31 ZNF200-202ENST00000396870 2373 ntAPPRIS ALT2 TSL 1 (best) BASIC19.36■□□□□ 0.69
CCHCR1Q8TD31 INTS10-201ENST00000397977 2804 ntAPPRIS P1 TSL 2 BASIC19.36■□□□□ 0.69
CCHCR1Q8TD31 LGALS12-203ENST00000394618 1618 ntAPPRIS P3 TSL 1 (best) BASIC19.36■□□□□ 0.69
CCHCR1Q8TD31 RALGAPA1-219ENST00000637992 8512 ntTSL 5 BASIC19.36■□□□□ 0.69
CCHCR1Q8TD31 ZNF274-203ENST00000424679 2539 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
CCHCR1Q8TD31 DACT2-201ENST00000366795 2942 ntAPPRIS P3 TSL 2 BASIC19.35■□□□□ 0.69
CCHCR1Q8TD31 TDRP-201ENST00000324079 3395 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
CCHCR1Q8TD31 EEPD1-201ENST00000242108 4765 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
CCHCR1Q8TD31 COL5A3-201ENST00000264828 6174 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
CCHCR1Q8TD31 FAM99A-201ENST00000382167 1432 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
CCHCR1Q8TD31 DDX51-202ENST00000397333 4718 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
CCHCR1Q8TD31 NUP153-202ENST00000537253 6030 ntAPPRIS ALT2 TSL 2 BASIC19.35■□□□□ 0.69
CCHCR1Q8TD31 EIF2AK3-201ENST00000303236 4646 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
CCHCR1Q8TD31 FBXO41-205ENST00000521871 7336 ntAPPRIS P1 TSL 5 BASIC19.35■□□□□ 0.69
CCHCR1Q8TD31 DDRGK1-201ENST00000354488 1306 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
CCHCR1Q8TD31 CLUH-201ENST00000435359 5224 ntAPPRIS P2 TSL 5 BASIC19.35■□□□□ 0.69
CCHCR1Q8TD31 TMEM223-201ENST00000307366 1288 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
CCHCR1Q8TD31 SPDYE2-201ENST00000341656 1219 ntAPPRIS ALT2 TSL 1 (best) BASIC19.35■□□□□ 0.69
CCHCR1Q8TD31 LCE2B-201ENST00000368780 612 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
CCHCR1Q8TD31 RHOG-202ENST00000396978 1066 ntAPPRIS P1 TSL 3 BASIC19.35■□□□□ 0.69
CCHCR1Q8TD31 RAMP1-204ENST00000409726 734 ntTSL 3 BASIC19.35■□□□□ 0.69
CCHCR1Q8TD31 SPDYE2B-202ENST00000455020 1219 ntAPPRIS ALT2 TSL 1 (best) BASIC19.35■□□□□ 0.69
CCHCR1Q8TD31 REXO2-216ENST00000544196 452 ntTSL 3 BASIC19.35■□□□□ 0.69
CCHCR1Q8TD31 CBLN3-202ENST00000555436 718 ntTSL 3 BASIC19.35■□□□□ 0.69
CCHCR1Q8TD31 TMEM131-201ENST00000186436 6640 ntAPPRIS P1 TSL 5 BASIC19.35■□□□□ 0.69
CCHCR1Q8TD31 ZYG11A-203ENST00000612017 3682 ntTSL 5 BASIC19.35■□□□□ 0.69
CCHCR1Q8TD31 HOXB1-201ENST00000239174 2020 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
CCHCR1Q8TD31 SLC39A5-201ENST00000266980 2031 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
CCHCR1Q8TD31 E2F2-201ENST00000361729 5191 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
CCHCR1Q8TD31 TRIM41-202ENST00000351937 2696 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
CCHCR1Q8TD31 ATP1B1-202ENST00000367816 2608 ntAPPRIS P1 TSL 5 BASIC19.35■□□□□ 0.69
CCHCR1Q8TD31 NECTIN3-211ENST00000493615 1876 ntAPPRIS ALT2 TSL 2 BASIC19.35■□□□□ 0.69
CCHCR1Q8TD31 RPRM-201ENST00000325926 1471 ntAPPRIS P1 BASIC19.35■□□□□ 0.69
CCHCR1Q8TD31 FARP1-242ENST00000627049 5103 ntTSL 5 BASIC19.35■□□□□ 0.69
CCHCR1Q8TD31 SCOC-208ENST00000510586 2193 ntAPPRIS ALT1 TSL 5 BASIC19.34■□□□□ 0.69
CCHCR1Q8TD31 PDLIM3-202ENST00000284770 1766 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
CCHCR1Q8TD31 CRKL-201ENST00000354336 5325 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
CCHCR1Q8TD31 CTNNBL1-204ENST00000405275 2076 ntTSL 5 BASIC19.34■□□□□ 0.69
CCHCR1Q8TD31 MYBL2-202ENST00000396863 2704 ntTSL 2 BASIC19.34■□□□□ 0.69
CCHCR1Q8TD31 EGFL6-201ENST00000361306 2398 ntAPPRIS P3 TSL 1 (best) BASIC19.34■□□□□ 0.69
CCHCR1Q8TD31 HNF1A-202ENST00000400024 2337 ntTSL 2 BASIC19.34■□□□□ 0.69
Retrieved 100 of 98,524 protein–RNA pairs in 49.6 ms