Protein–RNA interactions for Protein: Q8TBE1

CNIH3, Protein cornichon homolog 3, humanhuman

Predictions only

Length 160 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNIH3Q8TBE1 SLC23A3-203ENST00000409878 2010 ntAPPRIS P1 TSL 2 BASIC16.99■□□□□ 0.31
CNIH3Q8TBE1 MYO19-225ENST00000621344 1640 ntTSL 2 BASIC16.99■□□□□ 0.31
CNIH3Q8TBE1 RAB43-201ENST00000315150 4467 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
CNIH3Q8TBE1 ZBTB11-202ENST00000461821 2115 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
CNIH3Q8TBE1 GALNT17-201ENST00000333538 3884 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
CNIH3Q8TBE1 RPN2-201ENST00000237530 2515 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
CNIH3Q8TBE1 KCNA2-206ENST00000638477 1524 ntTSL 5 BASIC16.98■□□□□ 0.31
CNIH3Q8TBE1 FOXE1-201ENST00000375123 3462 ntAPPRIS P1 BASIC16.98■□□□□ 0.31
CNIH3Q8TBE1 AC099681.3-201ENST00000421500 939 ntTSL 4 BASIC16.98■□□□□ 0.31
CNIH3Q8TBE1 PYCR3-203ENST00000433751 1000 ntAPPRIS ALT2 TSL 2 BASIC16.98■□□□□ 0.31
CNIH3Q8TBE1 ZNF148-203ENST00000468369 1025 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
CNIH3Q8TBE1 SDHA-213ENST00000510361 2148 ntTSL 2 BASIC16.98■□□□□ 0.31
CNIH3Q8TBE1 AC092143.4-201ENST00000570217 559 ntTSL 4 BASIC16.98■□□□□ 0.31
CNIH3Q8TBE1 AC068587.9-201ENST00000641814 219 ntBASIC16.98■□□□□ 0.31
CNIH3Q8TBE1 PLCG1-201ENST00000244007 5285 ntAPPRIS P4 TSL 5 BASIC16.98■□□□□ 0.31
CNIH3Q8TBE1 OR6D1P-202ENST00000641007 5290 ntBASIC16.98■□□□□ 0.31
CNIH3Q8TBE1 CCNYL1-201ENST00000295414 3767 ntTSL 5 BASIC16.98■□□□□ 0.31
CNIH3Q8TBE1 ORAI3-204ENST00000566237 1393 ntTSL 5 BASIC16.98■□□□□ 0.31
CNIH3Q8TBE1 NLRP6-203ENST00000534750 2936 ntAPPRIS ALT2 TSL 2 BASIC16.98■□□□□ 0.31
CNIH3Q8TBE1 ENTPD2-202ENST00000355097 2095 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
CNIH3Q8TBE1 CD99P1-204ENST00000435581 2788 ntTSL 2 BASIC16.98■□□□□ 0.31
CNIH3Q8TBE1 AL162311.3-201ENST00000555918 2867 ntTSL 2 BASIC16.98■□□□□ 0.31
CNIH3Q8TBE1 FBLIM1-202ENST00000375766 3695 ntAPPRIS P1 TSL 2 BASIC16.98■□□□□ 0.31
CNIH3Q8TBE1 DTNB-209ENST00000407038 2294 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
CNIH3Q8TBE1 MFSD10-205ENST00000507555 1573 ntTSL 5 BASIC16.98■□□□□ 0.31
CNIH3Q8TBE1 PRR18-201ENST00000322583 3084 ntAPPRIS P2 BASIC16.98■□□□□ 0.31
CNIH3Q8TBE1 HNRNPK-202ENST00000360384 2038 ntAPPRIS ALT1 TSL 1 (best) BASIC16.97■□□□□ 0.31
CNIH3Q8TBE1 SPTBN4-204ENST00000392025 8671 ntAPPRIS ALT1 TSL 5 BASIC16.97■□□□□ 0.31
CNIH3Q8TBE1 JMJD4-201ENST00000366758 2595 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
CNIH3Q8TBE1 PARD3-206ENST00000374776 3389 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
CNIH3Q8TBE1 WT1-201ENST00000332351 3122 ntAPPRIS ALT2 TSL 1 (best) BASIC16.97■□□□□ 0.31
CNIH3Q8TBE1 SLCO6A1-202ENST00000389019 2340 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
CNIH3Q8TBE1 SENP2-201ENST00000296257 5717 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
CNIH3Q8TBE1 PHB2-203ENST00000535923 1515 ntAPPRIS P2 TSL 5 BASIC16.97■□□□□ 0.31
CNIH3Q8TBE1 DMRTA1-201ENST00000325870 5569 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
CNIH3Q8TBE1 SPAG1-201ENST00000251809 3748 ntAPPRIS P1 TSL 5 BASIC16.97■□□□□ 0.31
CNIH3Q8TBE1 DPP6-202ENST00000377770 3710 ntAPPRIS P4 TSL 1 (best) BASIC16.97■□□□□ 0.31
CNIH3Q8TBE1 AD000864.1-201ENST00000624076 2295 ntBASIC16.97■□□□□ 0.31
CNIH3Q8TBE1 H2AFV-201ENST00000222690 3804 ntAPPRIS ALT1 TSL 2 BASIC16.97■□□□□ 0.31
CNIH3Q8TBE1 CNIH4-203ENST00000366858 702 ntTSL 3 BASIC16.97■□□□□ 0.31
CNIH3Q8TBE1 KHDC3L-201ENST00000370367 1018 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
CNIH3Q8TBE1 N4BP2L1-203ENST00000380133 903 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
CNIH3Q8TBE1 MIR1302-2HG-202ENST00000473358 712 ntTSL 5 BASIC16.97■□□□□ 0.31
CNIH3Q8TBE1 PNN-205ENST00000556530 601 ntTSL 2 BASIC16.97■□□□□ 0.31
CNIH3Q8TBE1 AC140725.1-202ENST00000561145 712 ntTSL 5 BASIC16.97■□□□□ 0.31
CNIH3Q8TBE1 LIMD2-202ENST00000578061 756 ntAPPRIS P1 TSL 2 BASIC16.97■□□□□ 0.31
CNIH3Q8TBE1 VIM-AS1-202ENST00000605833 918 ntTSL 3 BASIC16.97■□□□□ 0.31
CNIH3Q8TBE1 MAZ-216ENST00000616501 991 ntTSL 5 BASIC16.97■□□□□ 0.31
CNIH3Q8TBE1 LRRC27-201ENST00000344079 1809 ntAPPRIS ALT2 TSL 2 BASIC16.97■□□□□ 0.31
CNIH3Q8TBE1 CYP2W1-202ENST00000340150 2361 ntTSL 2 BASIC16.97■□□□□ 0.31
CNIH3Q8TBE1 PFKL-201ENST00000349048 2912 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
CNIH3Q8TBE1 ZZZ3-201ENST00000370798 2468 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
CNIH3Q8TBE1 PPRC1-201ENST00000278070 5330 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
CNIH3Q8TBE1 CERCAM-201ENST00000372838 2685 ntAPPRIS P3 TSL 1 (best) BASIC16.97■□□□□ 0.31
CNIH3Q8TBE1 PTPRA-205ENST00000399903 3337 ntTSL 5 BASIC16.97■□□□□ 0.31
CNIH3Q8TBE1 RALGAPA1-219ENST00000637992 8512 ntTSL 5 BASIC16.97■□□□□ 0.31
CNIH3Q8TBE1 VSIG10L2-202ENST00000638636 2304 ntAPPRIS P1 TSL 5 BASIC16.97■□□□□ 0.31
CNIH3Q8TBE1 RUNX1-207ENST00000437180 5967 ntAPPRIS P3 TSL 5 BASIC16.97■□□□□ 0.31
CNIH3Q8TBE1 HDAC10-202ENST00000349505 1950 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
CNIH3Q8TBE1 KDELC1-201ENST00000376004 2060 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
CNIH3Q8TBE1 TULP1-208ENST00000614066 2084 ntAPPRIS ALT2 TSL 5 BASIC16.97■□□□□ 0.31
CNIH3Q8TBE1 RARA-206ENST00000425707 3041 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
CNIH3Q8TBE1 SNAPC2-201ENST00000221573 1542 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
CNIH3Q8TBE1 ISM1-201ENST00000262487 2593 ntAPPRIS P1 TSL 5 BASIC16.96■□□□□ 0.31
CNIH3Q8TBE1 SYTL3-203ENST00000367081 2692 ntAPPRIS P3 TSL 5 BASIC16.96■□□□□ 0.31
CNIH3Q8TBE1 HASPIN-201ENST00000325418 2797 ntAPPRIS P1 BASIC16.96■□□□□ 0.31
CNIH3Q8TBE1 RAB28-201ENST00000288723 1810 ntAPPRIS P3 TSL 1 (best) BASIC16.96■□□□□ 0.31
CNIH3Q8TBE1 ALDH16A1-201ENST00000293350 3153 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
CNIH3Q8TBE1 RNH1-205ENST00000397615 2014 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
CNIH3Q8TBE1 VASN-201ENST00000304735 2806 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
CNIH3Q8TBE1 PCDHA13-201ENST00000289272 5260 ntAPPRIS P2 TSL 1 (best) BASIC16.96■□□□□ 0.31
CNIH3Q8TBE1 AC026271.2-201ENST00000428091 497 ntBASIC16.96■□□□□ 0.31
CNIH3Q8TBE1 AC073111.3-201ENST00000478789 635 ntAPPRIS P1 TSL 3 BASIC16.96■□□□□ 0.31
CNIH3Q8TBE1 REPIN1-210ENST00000482680 1029 ntTSL 2 BASIC16.96■□□□□ 0.31
CNIH3Q8TBE1 LINC01976-201ENST00000565120 434 ntTSL 2 BASIC16.96■□□□□ 0.31
CNIH3Q8TBE1 RAP2CP1-201ENST00000605103 478 ntBASIC16.96■□□□□ 0.31
CNIH3Q8TBE1 KATNBL1P6-202ENST00000562413 1466 ntBASIC16.96■□□□□ 0.31
CNIH3Q8TBE1 PSMD8-207ENST00000592035 1581 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
CNIH3Q8TBE1 AC141586.5-201ENST00000624546 2050 ntBASIC16.96■□□□□ 0.31
CNIH3Q8TBE1 STOX1-201ENST00000298596 3377 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
CNIH3Q8TBE1 FICD-204ENST00000552695 3347 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
CNIH3Q8TBE1 PCK2-205ENST00000558096 2433 ntTSL 2 BASIC16.96■□□□□ 0.3
CNIH3Q8TBE1 JKAMP-215ENST00000616435 2338 ntTSL 5 BASIC16.96■□□□□ 0.3
CNIH3Q8TBE1 BANP-227ENST00000626016 2144 ntTSL 2 BASIC16.96■□□□□ 0.3
CNIH3Q8TBE1 POLR3D-201ENST00000306433 1931 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.3
CNIH3Q8TBE1 BIN1-208ENST00000376113 1832 ntTSL 1 (best) BASIC16.96■□□□□ 0.3
CNIH3Q8TBE1 PLA2R1-202ENST00000392771 5160 ntAPPRIS ALT2 TSL 1 (best) BASIC16.96■□□□□ 0.3
CNIH3Q8TBE1 PER3-203ENST00000377541 1524 ntTSL 1 (best) BASIC16.96■□□□□ 0.3
CNIH3Q8TBE1 TLE4-206ENST00000376552 3695 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
CNIH3Q8TBE1 COL9A1-201ENST00000320755 3059 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
CNIH3Q8TBE1 LINC00472-203ENST00000426635 2958 ntTSL 2 BASIC16.95■□□□□ 0.3
CNIH3Q8TBE1 ADAMTSL5-201ENST00000330475 2857 ntAPPRIS P1 TSL 2 BASIC16.95■□□□□ 0.3
CNIH3Q8TBE1 PARP6-220ENST00000569795 2855 ntAPPRIS P1 TSL 5 BASIC16.95■□□□□ 0.3
CNIH3Q8TBE1 DHCR7-201ENST00000355527 2666 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
CNIH3Q8TBE1 CEBPG-201ENST00000284000 4109 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
CNIH3Q8TBE1 ZNF584-209ENST00000599238 2288 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
CNIH3Q8TBE1 AC027097.1-202ENST00000592201 1954 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
CNIH3Q8TBE1 TAPBP-233ENST00000426633 1888 ntAPPRIS P4 TSL 1 (best) BASIC16.95■□□□□ 0.3
CNIH3Q8TBE1 PCCB-208ENST00000468777 1877 ntAPPRIS ALT2 TSL 3 BASIC16.95■□□□□ 0.3
CNIH3Q8TBE1 ENOPH1-203ENST00000509635 1874 ntTSL 3 BASIC16.95■□□□□ 0.3
Retrieved 100 of 98,524 protein–RNA pairs in 35.3 ms