Protein–RNA interactions for Protein: Q8NHS1

CLDND2, Claudin domain-containing protein 2, humanhuman

Predictions only

Length 167 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDND2Q8NHS1 TMEM114-203ENST00000620492 945 ntAPPRIS P1 TSL 2 BASIC15.8■□□□□ 0.12
CLDND2Q8NHS1 RBL2-201ENST00000262133 4906 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
CLDND2Q8NHS1 ZNF346-201ENST00000358149 2314 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
CLDND2Q8NHS1 CCDC17-209ENST00000528266 2181 ntAPPRIS P3 TSL 2 BASIC15.8■□□□□ 0.12
CLDND2Q8NHS1 KMT5A-201ENST00000330479 3069 ntAPPRIS ALT2 TSL 1 (best) BASIC15.8■□□□□ 0.12
CLDND2Q8NHS1 ABCC5-204ENST00000392579 1848 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
CLDND2Q8NHS1 ZNF623-203ENST00000526926 2612 ntAPPRIS ALT2 TSL 2 BASIC15.8■□□□□ 0.12
CLDND2Q8NHS1 MRPL3-201ENST00000264995 1706 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
CLDND2Q8NHS1 KIF16B-206ENST00000636835 5109 ntAPPRIS ALT2 TSL 1 (best) BASIC15.8■□□□□ 0.12
CLDND2Q8NHS1 ADCY6-206ENST00000550422 5877 ntTSL 2 BASIC15.79■□□□□ 0.12
CLDND2Q8NHS1 PTAR1-205ENST00000472967 1689 ntTSL 2 BASIC15.79■□□□□ 0.12
CLDND2Q8NHS1 DGKI-202ENST00000424189 4163 ntAPPRIS ALT2 TSL 5 BASIC15.79■□□□□ 0.12
CLDND2Q8NHS1 JPT1-203ENST00000409753 1605 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
CLDND2Q8NHS1 RBPMS-210ENST00000520191 1613 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
CLDND2Q8NHS1 ZNF74-202ENST00000400451 3159 ntAPPRIS P2 TSL 1 (best) BASIC15.79■□□□□ 0.12
CLDND2Q8NHS1 SAMD3-202ENST00000368134 2377 ntAPPRIS P1 TSL 2 BASIC15.79■□□□□ 0.12
CLDND2Q8NHS1 MSANTD2-202ENST00000374979 2349 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
CLDND2Q8NHS1 SEPT8-216ENST00000620483 4335 ntTSL 5 BASIC15.79■□□□□ 0.12
CLDND2Q8NHS1 SPATA6L-207ENST00000475086 1444 ntAPPRIS P1 TSL 2 BASIC15.79■□□□□ 0.12
CLDND2Q8NHS1 DBNL-219ENST00000490734 2004 ntTSL 2 BASIC15.79■□□□□ 0.12
CLDND2Q8NHS1 CYSTM1-201ENST00000261811 1336 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
CLDND2Q8NHS1 ILDR2-203ENST00000469934 1950 ntAPPRIS ALT2 TSL 5 BASIC15.79■□□□□ 0.12
CLDND2Q8NHS1 PYDC1-201ENST00000302964 813 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
CLDND2Q8NHS1 LCE4A-202ENST00000368777 672 ntAPPRIS P1 TSL 2 BASIC15.79■□□□□ 0.12
CLDND2Q8NHS1 UPK3BP1-201ENST00000428678 509 ntBASIC15.79■□□□□ 0.12
CLDND2Q8NHS1 AC004540.1-201ENST00000439120 891 ntTSL 2 BASIC15.79■□□□□ 0.12
CLDND2Q8NHS1 RAP1B-229ENST00000543393 874 ntTSL 3 BASIC15.79■□□□□ 0.12
CLDND2Q8NHS1 NEK4P2-201ENST00000580004 1012 ntBASIC15.79■□□□□ 0.12
CLDND2Q8NHS1 ELAVL1-202ENST00000593807 856 ntTSL 3 BASIC15.79■□□□□ 0.12
CLDND2Q8NHS1 CENPS-CORT-205ENST00000602787 571 ntAPPRIS P1 TSL 3 BASIC15.79■□□□□ 0.12
CLDND2Q8NHS1 AC008622.2-201ENST00000617006 1229 ntBASIC15.79■□□□□ 0.12
CLDND2Q8NHS1 AC064853.5-201ENST00000641976 258 ntAPPRIS P1 BASIC15.79■□□□□ 0.12
CLDND2Q8NHS1 PKD2-201ENST00000237596 5056 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
CLDND2Q8NHS1 ANKRD10-201ENST00000267339 2495 ntAPPRIS P1 TSL 2 BASIC15.79■□□□□ 0.12
CLDND2Q8NHS1 AKT1S1-207ENST00000391835 3075 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
CLDND2Q8NHS1 HERPUD2-202ENST00000396081 3057 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
CLDND2Q8NHS1 KCNC4-204ENST00000438661 2953 ntAPPRIS ALT2 TSL 1 (best) BASIC15.79■□□□□ 0.12
CLDND2Q8NHS1 SHISA5-220ENST00000619810 2385 ntTSL 2 BASIC15.79■□□□□ 0.12
CLDND2Q8NHS1 PRSS23-201ENST00000280258 4015 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
CLDND2Q8NHS1 PKP3-201ENST00000331563 2809 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
CLDND2Q8NHS1 KRT18-207ENST00000550600 1696 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
CLDND2Q8NHS1 ITGB5-201ENST00000296181 4372 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
CLDND2Q8NHS1 SLC6A9-201ENST00000357730 2168 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
CLDND2Q8NHS1 GPR3-201ENST00000374024 2115 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
CLDND2Q8NHS1 ASMTL-201ENST00000381317 2027 ntAPPRIS P3 TSL 1 (best) BASIC15.78■□□□□ 0.12
CLDND2Q8NHS1 ASMTL-202ENST00000381333 2035 ntAPPRIS ALT2 TSL 2 BASIC15.78■□□□□ 0.12
CLDND2Q8NHS1 AL031658.1-201ENST00000449519 2013 ntTSL 2 BASIC15.78■□□□□ 0.12
CLDND2Q8NHS1 PLD4-204ENST00000540372 2007 ntAPPRIS ALT2 TSL 2 BASIC15.78■□□□□ 0.12
CLDND2Q8NHS1 SLC16A5-206ENST00000580123 2019 ntAPPRIS P2 TSL 2 BASIC15.78■□□□□ 0.12
CLDND2Q8NHS1 PSAP-205ENST00000610929 1969 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
CLDND2Q8NHS1 PFDN6-206ENST00000463584 1915 ntTSL 3 BASIC15.78■□□□□ 0.12
CLDND2Q8NHS1 CHTOP-201ENST00000368686 2250 ntTSL 2 BASIC15.78■□□□□ 0.12
CLDND2Q8NHS1 FKBP8-206ENST00000596558 1756 ntAPPRIS ALT1 TSL 2 BASIC15.78■□□□□ 0.12
CLDND2Q8NHS1 FAM86B2-202ENST00000309608 806 ntTSL 3 BASIC15.78■□□□□ 0.12
CLDND2Q8NHS1 YPEL3-201ENST00000398838 935 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
CLDND2Q8NHS1 MALL-203ENST00000427178 1070 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
CLDND2Q8NHS1 AL671277.2-201ENST00000458060 996 ntBASIC15.78■□□□□ 0.12
CLDND2Q8NHS1 AF250324.1-201ENST00000506276 703 ntTSL 3 BASIC15.78■□□□□ 0.12
CLDND2Q8NHS1 FOSL1-203ENST00000531493 1200 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
CLDND2Q8NHS1 CD320-202ENST00000537716 1119 ntTSL 2 BASIC15.78■□□□□ 0.12
CLDND2Q8NHS1 MTHFS-202ENST00000559722 948 ntTSL 2 BASIC15.78■□□□□ 0.12
CLDND2Q8NHS1 AC132938.3-201ENST00000579095 357 ntTSL 2 BASIC15.78■□□□□ 0.12
CLDND2Q8NHS1 mascRNA-menRNA.2-201ENST00000616984 58 ntBASIC15.78■□□□□ 0.12
CLDND2Q8NHS1 GPR31-201ENST00000366834 2059 ntAPPRIS P1 BASIC15.78■□□□□ 0.12
CLDND2Q8NHS1 POLR3E-209ENST00000564209 2464 ntTSL 2 BASIC15.78■□□□□ 0.12
CLDND2Q8NHS1 GPR139-202ENST00000570682 1613 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
CLDND2Q8NHS1 ZNF74-203ENST00000403682 2789 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
CLDND2Q8NHS1 NOP14-204ENST00000502735 2723 ntAPPRIS ALT2 TSL 5 BASIC15.78■□□□□ 0.12
CLDND2Q8NHS1 NR1H2-210ENST00000598168 1915 ntAPPRIS ALT2 TSL 5 BASIC15.78■□□□□ 0.12
CLDND2Q8NHS1 RDH13-203ENST00000415061 1871 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
CLDND2Q8NHS1 ZNF419-204ENST00000415379 2186 ntAPPRIS ALT2 TSL 2 BASIC15.77■□□□□ 0.12
CLDND2Q8NHS1 ZBTB10-205ENST00000610895 2833 ntAPPRIS ALT2 TSL 2 BASIC15.77■□□□□ 0.12
CLDND2Q8NHS1 CHMP4A-201ENST00000347519 1393 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
CLDND2Q8NHS1 CDHR1-201ENST00000332904 2694 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
CLDND2Q8NHS1 CARMIL2-201ENST00000334583 4687 ntAPPRIS P3 TSL 1 (best) BASIC15.77■□□□□ 0.12
CLDND2Q8NHS1 GGT1-205ENST00000403838 1033 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
CLDND2Q8NHS1 KRT18P38-201ENST00000449496 1282 ntBASIC15.77■□□□□ 0.12
CLDND2Q8NHS1 MAP3K13-213ENST00000454237 526 ntTSL 3 BASIC15.77■□□□□ 0.12
CLDND2Q8NHS1 AC019068.1-202ENST00000483218 768 ntTSL 3 BASIC15.77■□□□□ 0.12
CLDND2Q8NHS1 AC239803.1-201ENST00000594189 1278 ntTSL 5 BASIC15.77■□□□□ 0.12
CLDND2Q8NHS1 DBP-204ENST00000599385 709 ntTSL 3 BASIC15.77■□□□□ 0.12
CLDND2Q8NHS1 C1QTNF8-202ENST00000621771 897 ntTSL 5 BASIC15.77■□□□□ 0.12
CLDND2Q8NHS1 CR769767.2-201ENST00000622735 460 ntBASIC15.77■□□□□ 0.12
CLDND2Q8NHS1 AL121956.5-201ENST00000625261 221 ntBASIC15.77■□□□□ 0.12
CLDND2Q8NHS1 AL772307.1-201ENST00000639363 1066 ntTSL 2 BASIC15.77■□□□□ 0.12
CLDND2Q8NHS1 FAM213A-206ENST00000615554 2213 ntAPPRIS P1 TSL 5 BASIC15.77■□□□□ 0.12
CLDND2Q8NHS1 WWC3-201ENST00000380861 6647 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
CLDND2Q8NHS1 LMNB1-202ENST00000395354 1572 ntTSL 1 (best) BASIC15.77■□□□□ 0.11
CLDND2Q8NHS1 PHC1-212ENST00000543824 4292 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
CLDND2Q8NHS1 MAP3K11-210ENST00000532507 1812 ntTSL 2 BASIC15.77■□□□□ 0.11
CLDND2Q8NHS1 GRM5-201ENST00000305432 4475 ntAPPRIS P3 TSL 1 (best) BASIC15.77■□□□□ 0.11
CLDND2Q8NHS1 ANKS3-201ENST00000304283 2662 ntAPPRIS P1 TSL 2 BASIC15.77■□□□□ 0.11
CLDND2Q8NHS1 HBEGF-201ENST00000230990 2386 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
CLDND2Q8NHS1 SNAP47-201ENST00000315781 2367 ntAPPRIS P3 TSL 1 (best) BASIC15.77■□□□□ 0.11
CLDND2Q8NHS1 YBX3-201ENST00000228251 1796 ntAPPRIS P3 TSL 1 (best) BASIC15.77■□□□□ 0.11
CLDND2Q8NHS1 RIIAD1-201ENST00000326413 1772 ntTSL 2 BASIC15.77■□□□□ 0.11
CLDND2Q8NHS1 NCK2-205ENST00000451463 1795 ntTSL 2 BASIC15.77■□□□□ 0.11
CLDND2Q8NHS1 NRN1-204ENST00000622188 1795 ntTSL 2 BASIC15.77■□□□□ 0.11
CLDND2Q8NHS1 SLC35A3-224ENST00000640732 1777 ntTSL 5 BASIC15.77■□□□□ 0.11
CLDND2Q8NHS1 SPSB4-201ENST00000310546 2908 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
Retrieved 100 of 98,524 protein–RNA pairs in 39.2 ms