Protein–RNA interactions for Protein: Q8ND90

PNMA1, Paraneoplastic antigen Ma1, humanhuman

Predictions only

Length 353 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PNMA1Q8ND90 GCDH-216ENST00000591470 1867 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
PNMA1Q8ND90 RFTN1-201ENST00000334133 2982 ntAPPRIS P2 TSL 1 (best) BASIC21.58■■□□□ 1.05
PNMA1Q8ND90 COL15A1-205ENST00000610452 5422 ntAPPRIS ALT2 TSL 5 BASIC21.58■■□□□ 1.05
PNMA1Q8ND90 MYLKP1-201ENST00000509077 1580 ntBASIC21.58■■□□□ 1.05
PNMA1Q8ND90 MARK2-208ENST00000508192 2924 ntAPPRIS P3 TSL 5 BASIC21.58■■□□□ 1.05
PNMA1Q8ND90 RASSF1-210ENST00000616212 1842 ntTSL 2 BASIC21.58■■□□□ 1.05
PNMA1Q8ND90 CLN3-202ENST00000355477 1173 ntTSL 1 (best) BASIC21.58■■□□□ 1.05
PNMA1Q8ND90 DAP-202ENST00000432074 1048 ntTSL 2 BASIC21.58■■□□□ 1.05
PNMA1Q8ND90 FAM86EP-206ENST00000510506 987 ntBASIC21.58■■□□□ 1.05
PNMA1Q8ND90 CD320-202ENST00000537716 1119 ntTSL 2 BASIC21.58■■□□□ 1.05
PNMA1Q8ND90 C17orf49-208ENST00000552402 760 ntTSL 2 BASIC21.58■■□□□ 1.05
PNMA1Q8ND90 LINC02317-201ENST00000555413 426 ntTSL 3 BASIC21.58■■□□□ 1.05
PNMA1Q8ND90 USF2-205ENST00000594064 1179 ntTSL 2 BASIC21.58■■□□□ 1.05
PNMA1Q8ND90 IFNL4-202ENST00000616270 1132 ntAPPRIS ALT2 TSL 1 (best) BASIC21.58■■□□□ 1.05
PNMA1Q8ND90 CADM1-222ENST00000616271 1246 ntTSL 5 BASIC21.58■■□□□ 1.05
PNMA1Q8ND90 PTH2R-204ENST00000617735 2472 ntTSL 2 BASIC21.58■■□□□ 1.05
PNMA1Q8ND90 FAM160A2-201ENST00000265978 3481 ntAPPRIS P3 TSL 1 (best) BASIC21.58■■□□□ 1.04
PNMA1Q8ND90 MIR4300HG-201ENST00000500502 1397 ntTSL 1 (best) BASIC21.58■■□□□ 1.04
PNMA1Q8ND90 C1QTNF1-209ENST00000581774 1368 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.04
PNMA1Q8ND90 SH2B3-201ENST00000341259 5406 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.04
PNMA1Q8ND90 TAPT1-201ENST00000405303 4591 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.04
PNMA1Q8ND90 AC008393.1-201ENST00000499601 1454 ntTSL 1 (best) BASIC21.58■■□□□ 1.04
PNMA1Q8ND90 RGS3-231ENST00000613049 1726 ntTSL 1 (best) BASIC21.58■■□□□ 1.04
PNMA1Q8ND90 CCDC50-202ENST00000392456 2454 ntAPPRIS P4 TSL 1 (best) BASIC21.57■■□□□ 1.04
PNMA1Q8ND90 AGAP4-201ENST00000311652 2715 ntAPPRIS ALT2 TSL 1 (best) BASIC21.57■■□□□ 1.04
PNMA1Q8ND90 SLC27A3-204ENST00000368661 2410 ntAPPRIS P2 TSL 1 (best) BASIC21.57■■□□□ 1.04
PNMA1Q8ND90 PFDN6-206ENST00000463584 1915 ntTSL 3 BASIC21.57■■□□□ 1.04
PNMA1Q8ND90 ANXA3-201ENST00000264908 1657 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
PNMA1Q8ND90 C6orf203-202ENST00000405204 1420 ntAPPRIS P1 TSL 2 BASIC21.57■■□□□ 1.04
PNMA1Q8ND90 DPP10-203ENST00000393147 2758 ntAPPRIS ALT2 TSL 1 (best) BASIC21.57■■□□□ 1.04
PNMA1Q8ND90 HOXA11-201ENST00000006015 2295 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
PNMA1Q8ND90 GRM5-201ENST00000305432 4475 ntAPPRIS P3 TSL 1 (best) BASIC21.57■■□□□ 1.04
PNMA1Q8ND90 CRTC1-203ENST00000594658 2384 ntTSL 1 (best) BASIC21.57■■□□□ 1.04
PNMA1Q8ND90 AL391807.1-203ENST00000604392 2365 ntBASIC21.57■■□□□ 1.04
PNMA1Q8ND90 IGLL1-201ENST00000249053 716 ntTSL 1 (best) BASIC21.57■■□□□ 1.04
PNMA1Q8ND90 PTGDS-202ENST00000371625 807 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
PNMA1Q8ND90 SMYD3-204ENST00000403792 1209 ntTSL 1 (best) BASIC21.57■■□□□ 1.04
PNMA1Q8ND90 AC005091.1-201ENST00000441955 1190 ntTSL 3 BASIC21.57■■□□□ 1.04
PNMA1Q8ND90 LBX1-AS1-203ENST00000454527 740 ntTSL 5 BASIC21.57■■□□□ 1.04
PNMA1Q8ND90 AC087623.2-201ENST00000528407 534 ntTSL 4 BASIC21.57■■□□□ 1.04
PNMA1Q8ND90 AKTIP-212ENST00000570004 1162 ntAPPRIS P3 TSL 1 (best) BASIC21.57■■□□□ 1.04
PNMA1Q8ND90 AL136038.4-201ENST00000603606 1261 ntBASIC21.57■■□□□ 1.04
PNMA1Q8ND90 RNASET2-213ENST00000611959 1124 ntTSL 5 BASIC21.57■■□□□ 1.04
PNMA1Q8ND90 NECTIN3-206ENST00000485303 3664 ntAPPRIS P3 TSL 1 (best) BASIC21.57■■□□□ 1.04
PNMA1Q8ND90 WDR18-202ENST00000585809 1608 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
PNMA1Q8ND90 TMEM53-202ENST00000372237 2310 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
PNMA1Q8ND90 HOOK1-201ENST00000371208 5857 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
PNMA1Q8ND90 KLC1-217ENST00000554280 2426 ntTSL 5 BASIC21.57■■□□□ 1.04
PNMA1Q8ND90 CCDC27-201ENST00000294600 2176 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
PNMA1Q8ND90 AC099343.3-201ENST00000605834 2503 ntBASIC21.57■■□□□ 1.04
PNMA1Q8ND90 AC009041.2-204ENST00000568394 3343 ntTSL 1 (best) BASIC21.57■■□□□ 1.04
PNMA1Q8ND90 OGFOD3-202ENST00000329197 1652 ntTSL 1 (best) BASIC21.56■■□□□ 1.04
PNMA1Q8ND90 SPHK2-211ENST00000600537 2136 ntAPPRIS ALT2 TSL 2 BASIC21.56■■□□□ 1.04
PNMA1Q8ND90 ENTPD8-202ENST00000371506 2222 ntAPPRIS P1 TSL 5 BASIC21.56■■□□□ 1.04
PNMA1Q8ND90 SEC61A2-201ENST00000298428 1893 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
PNMA1Q8ND90 ARRB1-201ENST00000360025 1895 ntAPPRIS P3 TSL 1 (best) BASIC21.56■■□□□ 1.04
PNMA1Q8ND90 TBX20-201ENST00000408931 1871 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
PNMA1Q8ND90 MBD3-207ENST00000590550 2782 ntTSL 2 BASIC21.56■■□□□ 1.04
PNMA1Q8ND90 FBXL18-205ENST00000620087 2076 ntTSL 5 BASIC21.56■■□□□ 1.04
PNMA1Q8ND90 CEP55-201ENST00000371485 2638 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
PNMA1Q8ND90 KRT9-201ENST00000246662 2290 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
PNMA1Q8ND90 HLA-F-217ENST00000334668 1283 ntAPPRIS ALT2 BASIC21.56■■□□□ 1.04
PNMA1Q8ND90 HLA-F-220ENST00000434407 884 ntBASIC21.56■■□□□ 1.04
PNMA1Q8ND90 VENTXP5-201ENST00000523979 775 ntBASIC21.56■■□□□ 1.04
PNMA1Q8ND90 ADAMTS10-205ENST00000595838 2458 ntTSL 2 BASIC21.56■■□□□ 1.04
PNMA1Q8ND90 ADPGK-201ENST00000311669 2557 ntAPPRIS P1 TSL 2 BASIC21.56■■□□□ 1.04
PNMA1Q8ND90 TNXA-203ENST00000507684 2038 ntBASIC21.56■■□□□ 1.04
PNMA1Q8ND90 STARD4-203ENST00000502322 1467 ntTSL 1 (best) BASIC21.56■■□□□ 1.04
PNMA1Q8ND90 CCDC63-202ENST00000545036 1887 ntAPPRIS ALT2 TSL 2 BASIC21.56■■□□□ 1.04
PNMA1Q8ND90 RHOBTB2-201ENST00000251822 5451 ntAPPRIS P3 TSL 1 (best) BASIC21.56■■□□□ 1.04
PNMA1Q8ND90 SCARF2-202ENST00000622235 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC21.55■■□□□ 1.04
PNMA1Q8ND90 EIF3B-202ENST00000397011 2966 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
PNMA1Q8ND90 EIF2B4-210ENST00000493344 1949 ntTSL 5 BASIC21.55■■□□□ 1.04
PNMA1Q8ND90 ENOPH1-201ENST00000273920 2025 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
PNMA1Q8ND90 FGFR1-238ENST00000532791 5590 ntAPPRIS ALT1 TSL 5 BASIC21.55■■□□□ 1.04
PNMA1Q8ND90 HOPX-201ENST00000317745 1129 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
PNMA1Q8ND90 GPX4-201ENST00000354171 919 ntAPPRIS P2 TSL 1 (best) BASIC21.55■■□□□ 1.04
PNMA1Q8ND90 PBXIP1-201ENST00000368460 1175 ntAPPRIS ALT2 TSL 3 BASIC21.55■■□□□ 1.04
PNMA1Q8ND90 TSPY8-203ENST00000383005 435 ntTSL 5 BASIC21.55■■□□□ 1.04
PNMA1Q8ND90 PVRIG2P-201ENST00000435460 978 ntBASIC21.55■■□□□ 1.04
PNMA1Q8ND90 AP000777.3-201ENST00000538705 491 ntTSL 3 BASIC21.55■■□□□ 1.04
PNMA1Q8ND90 AL136038.3-201ENST00000561909 1096 ntBASIC21.55■■□□□ 1.04
PNMA1Q8ND90 AC009065.1-201ENST00000564055 1225 ntBASIC21.55■■□□□ 1.04
PNMA1Q8ND90 AL358472.4-201ENST00000633140 710 ntBASIC21.55■■□□□ 1.04
PNMA1Q8ND90 ZNF655-203ENST00000357864 1370 ntTSL 2 BASIC21.55■■□□□ 1.04
PNMA1Q8ND90 KCNS2-201ENST00000287042 5219 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
PNMA1Q8ND90 SAMD11-216ENST00000620200 1874 ntTSL 5 BASIC21.55■■□□□ 1.04
PNMA1Q8ND90 LINC01819-201ENST00000422351 2156 ntTSL 5 BASIC21.55■■□□□ 1.04
PNMA1Q8ND90 TEPSIN-201ENST00000300714 2287 ntAPPRIS P2 TSL 1 (best) BASIC21.55■■□□□ 1.04
PNMA1Q8ND90 PPP1R3F-202ENST00000376188 2443 ntTSL 2 BASIC21.55■■□□□ 1.04
PNMA1Q8ND90 TEAD2-202ENST00000377214 2440 ntAPPRIS ALT1 TSL 2 BASIC21.55■■□□□ 1.04
PNMA1Q8ND90 AGER-205ENST00000375069 1538 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
PNMA1Q8ND90 ERCC2-205ENST00000485403 1538 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
PNMA1Q8ND90 BAIAP2-203ENST00000416299 1442 ntTSL 2 BASIC21.55■■□□□ 1.04
PNMA1Q8ND90 AC005332.1-201ENST00000577698 1310 ntBASIC21.55■■□□□ 1.04
PNMA1Q8ND90 RIMBP3-201ENST00000619918 6105 ntAPPRIS P1 BASIC21.54■■□□□ 1.04
PNMA1Q8ND90 KLHL2-201ENST00000226725 3134 ntAPPRIS P3 TSL 1 (best) BASIC21.54■■□□□ 1.04
PNMA1Q8ND90 SMARCC2-201ENST00000267064 4076 ntAPPRIS P4 TSL 1 (best) BASIC21.54■■□□□ 1.04
PNMA1Q8ND90 ARFRP1-207ENST00000612157 1698 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
PNMA1Q8ND90 PBK-203ENST00000522944 1499 ntTSL 2 BASIC21.54■■□□□ 1.04
Retrieved 100 of 98,524 protein–RNA pairs in 38.4 ms