Protein–RNA interactions for Protein: Q8NCS4

TMEM35B, Transmembrane protein 35B, humanhuman

Predictions only

Length 154 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM35BQ8NCS4 FA2H-201ENST00000219368 2424 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
TMEM35BQ8NCS4 OGFOD2-205ENST00000454694 1488 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
TMEM35BQ8NCS4 MLX-201ENST00000246912 2586 ntAPPRIS P3 TSL 1 (best) BASIC19.67■□□□□ 0.74
TMEM35BQ8NCS4 CHPF-203ENST00000535926 2634 ntTSL 2 BASIC19.67■□□□□ 0.74
TMEM35BQ8NCS4 CARHSP1-219ENST00000618335 2972 ntAPPRIS P1 TSL 4 BASIC19.67■□□□□ 0.74
TMEM35BQ8NCS4 DNAJC28-201ENST00000314399 1625 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
TMEM35BQ8NCS4 LINC01534-202ENST00000433232 554 ntTSL 3 BASIC19.67■□□□□ 0.74
TMEM35BQ8NCS4 AL929554.1-201ENST00000568665 460 ntAPPRIS P1 TSL 3 BASIC19.67■□□□□ 0.74
TMEM35BQ8NCS4 PPP2R2C-206ENST00000507294 1667 ntTSL 2 BASIC19.67■□□□□ 0.74
TMEM35BQ8NCS4 MROH1-202ENST00000423230 1712 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
TMEM35BQ8NCS4 DOC2A-208ENST00000564944 1782 ntAPPRIS P1 TSL 5 BASIC19.67■□□□□ 0.74
TMEM35BQ8NCS4 SYTL1-208ENST00000543823 2229 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
TMEM35BQ8NCS4 FAM3A-201ENST00000322269 1815 ntTSL 5 BASIC19.67■□□□□ 0.74
TMEM35BQ8NCS4 CORO6-212ENST00000584969 1416 ntAPPRIS ALT1 TSL 5 BASIC19.67■□□□□ 0.74
TMEM35BQ8NCS4 CDCA7L-203ENST00000406877 3066 ntAPPRIS P3 TSL 1 (best) BASIC19.67■□□□□ 0.74
TMEM35BQ8NCS4 FAM90A1-201ENST00000307435 2342 ntAPPRIS P1 TSL 2 BASIC19.67■□□□□ 0.74
TMEM35BQ8NCS4 UBP1-202ENST00000283629 4148 ntAPPRIS P3 TSL 1 (best) BASIC19.66■□□□□ 0.74
TMEM35BQ8NCS4 SNHG10-201ENST00000500370 1531 ntTSL 2 BASIC19.66■□□□□ 0.74
TMEM35BQ8NCS4 CHRAC1-201ENST00000220913 2488 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
TMEM35BQ8NCS4 HSCB-201ENST00000216027 1114 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
TMEM35BQ8NCS4 ILF2-202ENST00000368681 726 ntTSL 2 BASIC19.66■□□□□ 0.74
TMEM35BQ8NCS4 UQCRQ-201ENST00000378665 586 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
TMEM35BQ8NCS4 AC015712.4-203ENST00000559673 630 ntTSL 3 BASIC19.66■□□□□ 0.74
TMEM35BQ8NCS4 C17orf62-230ENST00000583617 866 ntTSL 5 BASIC19.66■□□□□ 0.74
TMEM35BQ8NCS4 C1orf198-201ENST00000366663 3858 ntAPPRIS P3 TSL 1 (best) BASIC19.66■□□□□ 0.74
TMEM35BQ8NCS4 C6orf118-201ENST00000230301 1812 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
TMEM35BQ8NCS4 LINC01568-207ENST00000641790 1380 ntBASIC19.66■□□□□ 0.74
TMEM35BQ8NCS4 GORASP1-206ENST00000422110 2523 ntTSL 2 BASIC19.66■□□□□ 0.74
TMEM35BQ8NCS4 SYT8-202ENST00000381968 1424 ntAPPRIS P2 TSL 5 BASIC19.66■□□□□ 0.74
TMEM35BQ8NCS4 KRT8P7-201ENST00000533003 1432 ntBASIC19.66■□□□□ 0.74
TMEM35BQ8NCS4 HOXB1-202ENST00000577092 1414 ntBASIC19.66■□□□□ 0.74
TMEM35BQ8NCS4 HCLS1-201ENST00000314583 2000 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
TMEM35BQ8NCS4 RASSF7-205ENST00000454668 1450 ntAPPRIS ALT2 TSL 1 (best) BASIC19.66■□□□□ 0.74
TMEM35BQ8NCS4 ENDOV-225ENST00000522751 1475 ntTSL 5 BASIC19.66■□□□□ 0.74
TMEM35BQ8NCS4 SALRNA1-201ENST00000555871 2086 ntTSL 4 BASIC19.66■□□□□ 0.74
TMEM35BQ8NCS4 AGAP2-AS1-201ENST00000542466 1500 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
TMEM35BQ8NCS4 COL4A3BP-201ENST00000261415 2262 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
TMEM35BQ8NCS4 PCED1A-201ENST00000356872 1706 ntTSL 2 BASIC19.65■□□□□ 0.74
TMEM35BQ8NCS4 MAFG-202ENST00000392366 1743 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
TMEM35BQ8NCS4 OSMR-202ENST00000502536 1740 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
TMEM35BQ8NCS4 EFS-201ENST00000216733 3118 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
TMEM35BQ8NCS4 PTTG1IP-204ENST00000445724 2497 ntTSL 2 BASIC19.65■□□□□ 0.74
TMEM35BQ8NCS4 PPHLN1-213ENST00000549190 1777 ntTSL 5 BASIC19.65■□□□□ 0.74
TMEM35BQ8NCS4 AC138932.1-201ENST00000534164 6830 ntBASIC19.65■□□□□ 0.74
TMEM35BQ8NCS4 EDC3-214ENST00000568176 1825 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
TMEM35BQ8NCS4 NDN-201ENST00000331837 1931 ntAPPRIS P1 BASIC19.65■□□□□ 0.74
TMEM35BQ8NCS4 ZNF74-203ENST00000403682 2789 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
TMEM35BQ8NCS4 TDRKH-203ENST00000368824 2824 ntAPPRIS P2 TSL 1 (best) BASIC19.65■□□□□ 0.74
TMEM35BQ8NCS4 HOXC11-201ENST00000243082 2039 ntTSL 3 BASIC19.65■□□□□ 0.74
TMEM35BQ8NCS4 FAM49B-214ENST00000519540 2021 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
TMEM35BQ8NCS4 HCK-202ENST00000375852 2082 ntAPPRIS ALT2 TSL 1 (best) BASIC19.65■□□□□ 0.74
TMEM35BQ8NCS4 SLC5A10-203ENST00000395645 2069 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
TMEM35BQ8NCS4 KRTAP5-3-201ENST00000399685 899 ntAPPRIS P1 BASIC19.65■□□□□ 0.74
TMEM35BQ8NCS4 ECEL1P2-202ENST00000465689 757 ntBASIC19.65■□□□□ 0.74
TMEM35BQ8NCS4 REPIN1-210ENST00000482680 1029 ntTSL 2 BASIC19.65■□□□□ 0.74
TMEM35BQ8NCS4 XYLT2-203ENST00000507602 2107 ntTSL 2 BASIC19.65■□□□□ 0.74
TMEM35BQ8NCS4 TXNRD3-203ENST00000524230 2950 ntAPPRIS ALT2 TSL 1 (best) BASIC19.65■□□□□ 0.74
TMEM35BQ8NCS4 SDR39U1-202ENST00000538105 1041 ntTSL 2 BASIC19.65■□□□□ 0.74
TMEM35BQ8NCS4 AC027796.4-201ENST00000575741 874 ntTSL 5 BASIC19.65■□□□□ 0.74
TMEM35BQ8NCS4 ATP5D-207ENST00000591660 637 ntAPPRIS P1 TSL 3 BASIC19.65■□□□□ 0.74
TMEM35BQ8NCS4 FP565260.3-205ENST00000620481 816 ntTSL 5 BASIC19.65■□□□□ 0.74
TMEM35BQ8NCS4 EBLN3P-205ENST00000629870 958 ntTSL 3 BASIC19.65■□□□□ 0.74
TMEM35BQ8NCS4 CDK13-207ENST00000613626 3099 ntTSL 5 BASIC19.65■□□□□ 0.74
TMEM35BQ8NCS4 HACE1-202ENST00000369125 3102 ntTSL 2 BASIC19.65■□□□□ 0.74
TMEM35BQ8NCS4 GSTZ1-204ENST00000393734 1424 ntTSL 5 BASIC19.65■□□□□ 0.74
TMEM35BQ8NCS4 KRT8P50-201ENST00000562022 1438 ntBASIC19.65■□□□□ 0.74
TMEM35BQ8NCS4 MAP3K6-207ENST00000493901 4309 ntAPPRIS P1 TSL 5 BASIC19.65■□□□□ 0.74
TMEM35BQ8NCS4 HS3ST3A1-201ENST00000284110 2527 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
TMEM35BQ8NCS4 PPP1R7-207ENST00000407025 1592 ntAPPRIS P1 TSL 5 BASIC19.65■□□□□ 0.74
TMEM35BQ8NCS4 RGS9BP-201ENST00000334176 2894 ntAPPRIS P1 BASIC19.65■□□□□ 0.74
TMEM35BQ8NCS4 MCUR1-201ENST00000379170 5471 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
TMEM35BQ8NCS4 P2RX2-208ENST00000542301 1881 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
TMEM35BQ8NCS4 SLC26A11-212ENST00000572725 1862 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
TMEM35BQ8NCS4 ACTG1-201ENST00000331925 1994 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.74
TMEM35BQ8NCS4 AP003774.1-201ENST00000316124 2340 ntTSL 2 BASIC19.64■□□□□ 0.74
TMEM35BQ8NCS4 MAFF-207ENST00000538999 2365 ntTSL 2 BASIC19.64■□□□□ 0.74
TMEM35BQ8NCS4 MAFF-206ENST00000538320 2458 ntAPPRIS P1 TSL 4 BASIC19.64■□□□□ 0.74
TMEM35BQ8NCS4 KLHL17-201ENST00000338591 2560 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
TMEM35BQ8NCS4 ACSS3-201ENST00000261206 2666 ntAPPRIS ALT1 TSL 1 (best) BASIC19.64■□□□□ 0.73
TMEM35BQ8NCS4 POMT2-201ENST00000261534 4876 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
TMEM35BQ8NCS4 RAB11FIP2-201ENST00000355624 6061 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
TMEM35BQ8NCS4 MPG-201ENST00000219431 1193 ntAPPRIS P4 TSL 3 BASIC19.64■□□□□ 0.73
TMEM35BQ8NCS4 FUOM-201ENST00000278025 709 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
TMEM35BQ8NCS4 CHCHD6-201ENST00000290913 1006 ntAPPRIS P2 TSL 1 (best) BASIC19.64■□□□□ 0.73
TMEM35BQ8NCS4 WNT1-201ENST00000293549 1185 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
TMEM35BQ8NCS4 NME1-202ENST00000336097 986 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
TMEM35BQ8NCS4 NME1-203ENST00000393196 940 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
TMEM35BQ8NCS4 HMGA1P5-201ENST00000412453 271 ntBASIC19.64■□□□□ 0.73
TMEM35BQ8NCS4 AC087499.1-201ENST00000418141 1075 ntBASIC19.64■□□□□ 0.73
TMEM35BQ8NCS4 LTB-210ENST00000429299 897 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
TMEM35BQ8NCS4 ADCYAP1-202ENST00000450565 918 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
TMEM35BQ8NCS4 RPL29-204ENST00000479017 670 ntAPPRIS P1 TSL 3 BASIC19.64■□□□□ 0.73
TMEM35BQ8NCS4 AC005606.2-201ENST00000564438 614 ntTSL 2 BASIC19.64■□□□□ 0.73
TMEM35BQ8NCS4 YPEL3-207ENST00000566134 761 ntTSL 5 BASIC19.64■□□□□ 0.73
TMEM35BQ8NCS4 AL512604.3-201ENST00000569583 964 ntBASIC19.64■□□□□ 0.73
TMEM35BQ8NCS4 FAM87A-204ENST00000613235 858 ntBASIC19.64■□□□□ 0.73
TMEM35BQ8NCS4 OR13J1-201ENST00000377981 1339 ntAPPRIS P1 BASIC19.64■□□□□ 0.73
TMEM35BQ8NCS4 DYNLL1-209ENST00000550845 1376 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
TMEM35BQ8NCS4 NR1H2-202ENST00000411902 1466 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
TMEM35BQ8NCS4 MAPK9-207ENST00000452135 4815 ntAPPRIS P5 TSL 5 BASIC19.64■□□□□ 0.73
Retrieved 100 of 98,524 protein–RNA pairs in 21.4 ms