Protein–RNA interactions for Protein: Q7Z7F7

MRPL55, 39S ribosomal protein L55, mitochondrial, humanhuman

Known RBP Predictions only

Length 128 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL55Q7Z7F7 RB1CC1-201ENST00000025008 6635 ntAPPRIS P3 TSL 1 (best) BASIC11.98□□□□□ -0.49
MRPL55Q7Z7F7 PDE6B-202ENST00000429163 2120 ntTSL 2 BASIC11.98□□□□□ -0.49
MRPL55Q7Z7F7 COPS7A-215ENST00000543155 2127 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
MRPL55Q7Z7F7 SARM1-208ENST00000585482 10309 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
MRPL55Q7Z7F7 FUCA1-201ENST00000374479 2047 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
MRPL55Q7Z7F7 RAPGEF1-202ENST00000372190 6045 ntAPPRIS P4 TSL 1 (best) BASIC11.98□□□□□ -0.49
MRPL55Q7Z7F7 DHRS12-201ENST00000218981 1970 ntTSL 2 BASIC11.98□□□□□ -0.49
MRPL55Q7Z7F7 CCDC177-201ENST00000599174 4131 ntAPPRIS P1 TSL 3 BASIC11.97□□□□□ -0.49
MRPL55Q7Z7F7 PRPF39-201ENST00000355765 2868 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
MRPL55Q7Z7F7 PRRT1-202ENST00000375150 1726 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
MRPL55Q7Z7F7 SH3BP4-202ENST00000392011 5194 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
MRPL55Q7Z7F7 DKK3-202ENST00000396505 2650 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
MRPL55Q7Z7F7 UBE2E3-209ENST00000602710 1556 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
MRPL55Q7Z7F7 TESMIN-201ENST00000255087 2579 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
MRPL55Q7Z7F7 ICA1-206ENST00000402384 2458 ntAPPRIS P3 TSL 2 BASIC11.97□□□□□ -0.49
MRPL55Q7Z7F7 BPIFB3-201ENST00000375494 1454 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
MRPL55Q7Z7F7 AC079598.2-202ENST00000546624 1451 ntBASIC11.97□□□□□ -0.49
MRPL55Q7Z7F7 GIT2-202ENST00000354574 5387 ntTSL 5 BASIC11.97□□□□□ -0.49
MRPL55Q7Z7F7 IGFBP4-201ENST00000269593 2200 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
MRPL55Q7Z7F7 ADK-206ENST00000541550 2222 ntTSL 2 BASIC11.97□□□□□ -0.49
MRPL55Q7Z7F7 KRTCAP3-201ENST00000288873 872 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
MRPL55Q7Z7F7 SERF1A-201ENST00000317633 963 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
MRPL55Q7Z7F7 ZNF213-202ENST00000416391 2996 ntAPPRIS P1 TSL 5 BASIC11.97□□□□□ -0.49
MRPL55Q7Z7F7 NIFKP9-201ENST00000419265 221 ntBASIC11.97□□□□□ -0.49
MRPL55Q7Z7F7 AL353807.1-201ENST00000427475 662 ntBASIC11.97□□□□□ -0.49
MRPL55Q7Z7F7 RTBDN-203ENST00000458671 1066 ntAPPRIS ALT2 TSL 1 (best) BASIC11.97□□□□□ -0.49
MRPL55Q7Z7F7 PEX5L-206ENST00000465751 2147 ntAPPRIS ALT2 TSL 2 BASIC11.97□□□□□ -0.49
MRPL55Q7Z7F7 MIR1302-2HG-202ENST00000473358 712 ntTSL 5 BASIC11.97□□□□□ -0.49
MRPL55Q7Z7F7 Z85996.1-201ENST00000494644 937 ntBASIC11.97□□□□□ -0.49
MRPL55Q7Z7F7 CPEB2-207ENST00000507071 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC11.97□□□□□ -0.49
MRPL55Q7Z7F7 THAP6-213ENST00000514480 1161 ntAPPRIS P3 TSL 1 (best) BASIC11.97□□□□□ -0.49
MRPL55Q7Z7F7 PRSS44-201ENST00000515154 1146 ntBASIC11.97□□□□□ -0.49
MRPL55Q7Z7F7 PLEKHA2-206ENST00000521746 2127 ntTSL 5 BASIC11.97□□□□□ -0.49
MRPL55Q7Z7F7 TMEM235-204ENST00000551068 1187 ntAPPRIS P1 TSL 5 BASIC11.97□□□□□ -0.49
MRPL55Q7Z7F7 AC140725.1-202ENST00000561145 712 ntTSL 5 BASIC11.97□□□□□ -0.49
MRPL55Q7Z7F7 AC140479.4-201ENST00000561715 463 ntTSL 4 BASIC11.97□□□□□ -0.49
MRPL55Q7Z7F7 RN7SL471P-201ENST00000580476 299 ntBASIC11.97□□□□□ -0.49
MRPL55Q7Z7F7 ASPSCR1-211ENST00000581647 720 ntTSL 2 BASIC11.97□□□□□ -0.49
MRPL55Q7Z7F7 FBXO17-202ENST00000595329 1299 ntAPPRIS P1 TSL 2 BASIC11.97□□□□□ -0.49
MRPL55Q7Z7F7 RPL23AP53-202ENST00000606507 370 ntTSL 3 BASIC11.97□□□□□ -0.49
MRPL55Q7Z7F7 KRTAP5-11-203ENST00000617152 558 ntAPPRIS ALT2 TSL 5 BASIC11.97□□□□□ -0.49
MRPL55Q7Z7F7 RGS9BP-201ENST00000334176 2894 ntAPPRIS P1 BASIC11.97□□□□□ -0.49
MRPL55Q7Z7F7 AL031282.2-201ENST00000598846 5079 ntTSL 2 BASIC11.97□□□□□ -0.49
MRPL55Q7Z7F7 LCORL-203ENST00000382226 5009 ntAPPRIS P2 TSL 5 BASIC11.97□□□□□ -0.49
MRPL55Q7Z7F7 RRAGD-202ENST00000369415 4900 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
MRPL55Q7Z7F7 PLA2G7-201ENST00000274793 1882 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
MRPL55Q7Z7F7 PSTPIP1-203ENST00000558012 1896 ntAPPRIS P2 TSL 1 (best) BASIC11.97□□□□□ -0.49
MRPL55Q7Z7F7 ARSA-203ENST00000395619 1824 ntAPPRIS P1 TSL 5 BASIC11.97□□□□□ -0.49
MRPL55Q7Z7F7 BRPF1-201ENST00000383829 4736 ntAPPRIS ALT1 TSL 1 (best) BASIC11.97□□□□□ -0.49
MRPL55Q7Z7F7 GAS7-205ENST00000542249 1799 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
MRPL55Q7Z7F7 KLC1-217ENST00000554280 2426 ntTSL 5 BASIC11.97□□□□□ -0.49
MRPL55Q7Z7F7 ISM2-207ENST00000493585 1739 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
MRPL55Q7Z7F7 AC020922.1-201ENST00000591954 3058 ntAPPRIS P1 TSL 5 BASIC11.97□□□□□ -0.49
MRPL55Q7Z7F7 PCGF3-208ENST00000470161 1652 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
MRPL55Q7Z7F7 FAM90A1-201ENST00000307435 2342 ntAPPRIS P1 TSL 2 BASIC11.97□□□□□ -0.49
MRPL55Q7Z7F7 LGALS12-203ENST00000394618 1618 ntAPPRIS P3 TSL 1 (best) BASIC11.97□□□□□ -0.49
MRPL55Q7Z7F7 AC005082.1-201ENST00000413042 2259 ntBASIC11.97□□□□□ -0.49
MRPL55Q7Z7F7 ENTPD8-202ENST00000371506 2222 ntAPPRIS P1 TSL 5 BASIC11.96□□□□□ -0.49
MRPL55Q7Z7F7 MFSD1-201ENST00000264266 1594 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
MRPL55Q7Z7F7 SERGEF-201ENST00000265965 1566 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
MRPL55Q7Z7F7 C15orf52-202ENST00000397536 4717 ntAPPRIS ALT2 TSL 1 (best) BASIC11.96□□□□□ -0.49
MRPL55Q7Z7F7 DNM1-206ENST00000475805 2710 ntAPPRIS ALT1 TSL 2 BASIC11.96□□□□□ -0.49
MRPL55Q7Z7F7 IFFO1-212ENST00000619571 2724 ntTSL 2 BASIC11.96□□□□□ -0.49
MRPL55Q7Z7F7 SCRIB-203ENST00000377533 5108 ntAPPRIS ALT2 TSL 1 (best) BASIC11.96□□□□□ -0.49
MRPL55Q7Z7F7 AMDHD2-201ENST00000293971 1459 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
MRPL55Q7Z7F7 KLHL17-201ENST00000338591 2560 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
MRPL55Q7Z7F7 PHKA1-205ENST00000541944 5944 ntAPPRIS ALT1 TSL 1 (best) BASIC11.96□□□□□ -0.49
MRPL55Q7Z7F7 KLHL40-201ENST00000287777 2517 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
MRPL55Q7Z7F7 ZBTB8A-201ENST00000316459 1943 ntTSL 1 (best) BASIC11.96□□□□□ -0.49
MRPL55Q7Z7F7 GTF3A-201ENST00000381140 1383 ntAPPRIS ALT2 TSL 1 (best) BASIC11.96□□□□□ -0.49
MRPL55Q7Z7F7 GPBAR1-202ENST00000519574 1382 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
MRPL55Q7Z7F7 AC009113.1-201ENST00000570267 2443 ntBASIC11.96□□□□□ -0.49
MRPL55Q7Z7F7 IL12RB2-201ENST00000262345 4040 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
MRPL55Q7Z7F7 WBP2-219ENST00000626827 1867 ntTSL 5 BASIC11.96□□□□□ -0.49
MRPL55Q7Z7F7 MARK2-201ENST00000350490 2903 ntAPPRIS ALT2 TSL 1 (best) BASIC11.96□□□□□ -0.49
MRPL55Q7Z7F7 P2RX3-204ENST00000616487 1346 ntTSL 5 BASIC11.96□□□□□ -0.49
MRPL55Q7Z7F7 EMX2-203ENST00000553456 2897 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
MRPL55Q7Z7F7 ATP6V1D-201ENST00000216442 1845 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
MRPL55Q7Z7F7 SH3BP2-202ENST00000435136 2318 ntAPPRIS P3 TSL 2 BASIC11.96□□□□□ -0.49
MRPL55Q7Z7F7 NDUFB10-201ENST00000268668 705 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
MRPL55Q7Z7F7 PMAIP1-201ENST00000269518 1262 ntTSL 1 (best) BASIC11.96□□□□□ -0.49
MRPL55Q7Z7F7 MTFP1-202ENST00000355143 891 ntTSL 2 BASIC11.96□□□□□ -0.49
MRPL55Q7Z7F7 NMRK1-201ENST00000361092 1185 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
MRPL55Q7Z7F7 TRA2B-203ENST00000382191 976 ntTSL 2 BASIC11.96□□□□□ -0.49
MRPL55Q7Z7F7 ASH1L-AS1-202ENST00000456633 911 ntTSL 2 BASIC11.96□□□□□ -0.49
MRPL55Q7Z7F7 LRRC75A-AS1-205ENST00000475953 1201 ntTSL 1 (best) BASIC11.96□□□□□ -0.49
MRPL55Q7Z7F7 NDUFA13-203ENST00000503283 825 ntTSL 2 BASIC11.96□□□□□ -0.49
MRPL55Q7Z7F7 PRELID2-204ENST00000505416 738 ntAPPRIS P2 TSL 3 BASIC11.96□□□□□ -0.49
MRPL55Q7Z7F7 ADM-205ENST00000528544 586 ntTSL 2 BASIC11.96□□□□□ -0.49
MRPL55Q7Z7F7 TESC-AS1-201ENST00000547006 1053 ntTSL 2 BASIC11.96□□□□□ -0.49
MRPL55Q7Z7F7 AC009090.2-201ENST00000565829 472 ntTSL 3 BASIC11.96□□□□□ -0.49
MRPL55Q7Z7F7 ZNF667-AS1-206ENST00000591797 535 ntTSL 5 BASIC11.96□□□□□ -0.49
MRPL55Q7Z7F7 CD24-208ENST00000622315 825 ntAPPRIS ALT2 TSL 2 BASIC11.96□□□□□ -0.49
MRPL55Q7Z7F7 ADD3-AS1-204ENST00000627565 388 ntTSL 3 BASIC11.96□□□□□ -0.49
MRPL55Q7Z7F7 AC073648.6-201ENST00000641589 218 ntBASIC11.96□□□□□ -0.49
MRPL55Q7Z7F7 PDLIM4-201ENST00000253754 2282 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
MRPL55Q7Z7F7 ANKS3-202ENST00000446014 2265 ntTSL 5 BASIC11.96□□□□□ -0.49
MRPL55Q7Z7F7 AK3-202ENST00000381809 2736 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
MRPL55Q7Z7F7 AC087457.1-201ENST00000503496 2727 ntTSL 2 BASIC11.96□□□□□ -0.49
MRPL55Q7Z7F7 RGS3-231ENST00000613049 1726 ntTSL 1 (best) BASIC11.96□□□□□ -0.49
Retrieved 100 of 98,524 protein–RNA pairs in 28.5 ms