Protein–RNA interactions for Protein: Q6PIL6

KCNIP4, Kv channel-interacting protein 4, humanhuman

Predictions only

Length 250 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KCNIP4Q6PIL6 KLF1-201ENST00000264834 1592 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
KCNIP4Q6PIL6 HLA-G-205ENST00000428701 1578 ntAPPRIS P2 BASIC14.41□□□□□ -0.1
KCNIP4Q6PIL6 IRAK3-203ENST00000545837 1579 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
KCNIP4Q6PIL6 FBXO27-207ENST00000600828 1557 ntAPPRIS ALT1 TSL 5 BASIC14.41□□□□□ -0.1
KCNIP4Q6PIL6 ZNF589-203ENST00000427617 1677 ntTSL 2 BASIC14.41□□□□□ -0.1
KCNIP4Q6PIL6 KCNIP4-205ENST00000382152 1767 ntTSL 5 BASIC14.41□□□□□ -0.1
KCNIP4Q6PIL6 CCNA1-202ENST00000440264 1758 ntAPPRIS P1 TSL 2 BASIC14.41□□□□□ -0.1
KCNIP4Q6PIL6 ACSM2A-201ENST00000219054 1988 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
KCNIP4Q6PIL6 CCDC43-201ENST00000315286 2082 ntAPPRIS P2 TSL 1 (best) BASIC14.41□□□□□ -0.1
KCNIP4Q6PIL6 CYP2W1-202ENST00000340150 2361 ntTSL 2 BASIC14.41□□□□□ -0.1
KCNIP4Q6PIL6 CBFB-202ENST00000412916 2971 ntAPPRIS ALT1 TSL 1 (best) BASIC14.41□□□□□ -0.1
KCNIP4Q6PIL6 LRRFIP1-201ENST00000244815 4370 ntAPPRIS P3 TSL 1 (best) BASIC14.41□□□□□ -0.1
KCNIP4Q6PIL6 ZNF623-201ENST00000458270 2733 ntAPPRIS ALT2 TSL 1 (best) BASIC14.41□□□□□ -0.1
KCNIP4Q6PIL6 CCNI2-204ENST00000614847 2642 ntAPPRIS ALT2 TSL 1 (best) BASIC14.41□□□□□ -0.1
KCNIP4Q6PIL6 OTOP2-201ENST00000331427 2147 ntAPPRIS P1 TSL 5 BASIC14.41□□□□□ -0.1
KCNIP4Q6PIL6 SNX2-213ENST00000514949 2119 ntTSL 2 BASIC14.41□□□□□ -0.1
KCNIP4Q6PIL6 HIBCH-201ENST00000359678 1939 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
KCNIP4Q6PIL6 INTS11-209ENST00000450926 1839 ntTSL 5 BASIC14.41□□□□□ -0.1
KCNIP4Q6PIL6 TFCP2-205ENST00000549867 1727 ntTSL 5 BASIC14.41□□□□□ -0.1
KCNIP4Q6PIL6 CCDC88C-203ENST00000389856 1641 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
KCNIP4Q6PIL6 MSRB1-201ENST00000361871 1423 ntAPPRIS P2 TSL 1 (best) BASIC14.41□□□□□ -0.1
KCNIP4Q6PIL6 DMPK-201ENST00000291270 2787 ntAPPRIS P3 TSL 5 BASIC14.4□□□□□ -0.1
KCNIP4Q6PIL6 PDE4A-201ENST00000293683 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC14.4□□□□□ -0.1
KCNIP4Q6PIL6 SNAPC3-207ENST00000610884 2453 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
KCNIP4Q6PIL6 MYZAP-201ENST00000267853 2361 ntAPPRIS P3 TSL 1 (best) BASIC14.4□□□□□ -0.1
KCNIP4Q6PIL6 CAMKK2-206ENST00000402834 2051 ntAPPRIS P4 TSL 1 (best) BASIC14.4□□□□□ -0.1
KCNIP4Q6PIL6 PPP1R16B-202ENST00000373331 6106 ntTSL 5 BASIC14.4□□□□□ -0.1
KCNIP4Q6PIL6 MOCS2-202ENST00000396954 1785 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
KCNIP4Q6PIL6 LENG8-208ENST00000610347 5789 ntAPPRIS ALT2 TSL 5 BASIC14.4□□□□□ -0.1
KCNIP4Q6PIL6 TRAF4-205ENST00000444415 1456 ntTSL 5 BASIC14.4□□□□□ -0.1
KCNIP4Q6PIL6 APBA2-207ENST00000558402 4031 ntAPPRIS P1 TSL 5 BASIC14.4□□□□□ -0.1
KCNIP4Q6PIL6 ZSCAN10-207ENST00000575108 2247 ntTSL 2 BASIC14.4□□□□□ -0.1
KCNIP4Q6PIL6 SLC30A2-202ENST00000374278 3097 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
KCNIP4Q6PIL6 DNTTIP1-201ENST00000372622 1290 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
KCNIP4Q6PIL6 HLA-G-202ENST00000376815 851 ntBASIC14.4□□□□□ -0.1
KCNIP4Q6PIL6 HLA-G-203ENST00000376818 1127 ntBASIC14.4□□□□□ -0.1
KCNIP4Q6PIL6 TSPY4-201ENST00000383008 1143 ntAPPRIS ALT2 TSL 5 BASIC14.4□□□□□ -0.1
KCNIP4Q6PIL6 SAPCD2P1-201ENST00000395413 1184 ntBASIC14.4□□□□□ -0.1
KCNIP4Q6PIL6 IFT74-203ENST00000433700 2119 ntAPPRIS P1 TSL 5 BASIC14.4□□□□□ -0.1
KCNIP4Q6PIL6 PPM1N-207ENST00000451287 1293 ntAPPRIS P1 TSL 5 BASIC14.4□□□□□ -0.1
KCNIP4Q6PIL6 AC106738.1-201ENST00000560487 359 ntTSL 3 BASIC14.4□□□□□ -0.1
KCNIP4Q6PIL6 LRRC37A17P-202ENST00000570478 572 ntTSL 4 BASIC14.4□□□□□ -0.1
KCNIP4Q6PIL6 FAM120AOS-201ENST00000375412 2771 ntAPPRIS P3 TSL 1 (best) BASIC14.4□□□□□ -0.1
KCNIP4Q6PIL6 CACNA1G-205ENST00000360761 7497 ntAPPRIS ALT2 TSL 1 (best) BASIC14.4□□□□□ -0.1
KCNIP4Q6PIL6 LINC00957-202ENST00000441052 2590 ntTSL 2 BASIC14.4□□□□□ -0.1
KCNIP4Q6PIL6 CNGB1-201ENST00000251102 5641 ntAPPRIS P3 TSL 1 (best) BASIC14.4□□□□□ -0.1
KCNIP4Q6PIL6 NUS1-201ENST00000368494 4676 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
KCNIP4Q6PIL6 PODNL1-202ENST00000339560 2165 ntAPPRIS P3 TSL 1 (best) BASIC14.4□□□□□ -0.1
KCNIP4Q6PIL6 NLGN4X-203ENST00000381093 5865 ntAPPRIS P2 TSL 2 BASIC14.4□□□□□ -0.1
KCNIP4Q6PIL6 SHROOM2-201ENST00000380913 7447 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
KCNIP4Q6PIL6 LUC7L-202ENST00000337351 2097 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
KCNIP4Q6PIL6 HLA-G-201ENST00000360323 1427 ntAPPRIS P2 BASIC14.4□□□□□ -0.1
KCNIP4Q6PIL6 MVB12B-201ENST00000361171 4819 ntAPPRIS P1 TSL 2 BASIC14.4□□□□□ -0.1
KCNIP4Q6PIL6 SCAF1-201ENST00000360565 4306 ntAPPRIS P2 TSL 2 BASIC14.4□□□□□ -0.11
KCNIP4Q6PIL6 FLCN-203ENST00000389169 1692 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
KCNIP4Q6PIL6 AC090206.1-201ENST00000615734 1678 ntTSL 5 BASIC14.39□□□□□ -0.11
KCNIP4Q6PIL6 UNG-202ENST00000336865 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
KCNIP4Q6PIL6 UBE3A-207ENST00000614096 8741 ntAPPRIS ALT1 TSL 1 (best) BASIC14.39□□□□□ -0.11
KCNIP4Q6PIL6 AC011474.1-201ENST00000582581 2582 ntTSL 2 BASIC14.39□□□□□ -0.11
KCNIP4Q6PIL6 CLIP4-201ENST00000320081 4293 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
KCNIP4Q6PIL6 PARD3-206ENST00000374776 3389 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
KCNIP4Q6PIL6 PDLIM2-205ENST00000397761 1491 ntAPPRIS P1 TSL 5 BASIC14.39□□□□□ -0.11
KCNIP4Q6PIL6 TBXA2R-202ENST00000411851 1494 ntTSL 2 BASIC14.39□□□□□ -0.11
KCNIP4Q6PIL6 NEO1-206ENST00000558964 4441 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
KCNIP4Q6PIL6 MELTF-201ENST00000296350 3963 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
KCNIP4Q6PIL6 F11R-206ENST00000621309 4770 ntTSL 5 BASIC14.39□□□□□ -0.11
KCNIP4Q6PIL6 GPS1-201ENST00000306823 1842 ntAPPRIS P3 TSL 1 (best) BASIC14.39□□□□□ -0.11
KCNIP4Q6PIL6 RFT1-202ENST00000394738 1800 ntTSL 5 BASIC14.39□□□□□ -0.11
KCNIP4Q6PIL6 MBD1-208ENST00000398493 1845 ntTSL 5 BASIC14.39□□□□□ -0.11
KCNIP4Q6PIL6 UBQLN4P1-201ENST00000461599 1801 ntBASIC14.39□□□□□ -0.11
KCNIP4Q6PIL6 AC108860.2-201ENST00000562760 2183 ntBASIC14.39□□□□□ -0.11
KCNIP4Q6PIL6 TOM1L1-221ENST00000575882 2507 ntAPPRIS P2 TSL 1 (best) BASIC14.39□□□□□ -0.11
KCNIP4Q6PIL6 MTSS1-203ENST00000431961 1711 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
KCNIP4Q6PIL6 RASL10B-201ENST00000603017 3205 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
KCNIP4Q6PIL6 SLX1B-SULT1A4-201ENST00000344620 2424 ntTSL 2 BASIC14.39□□□□□ -0.11
KCNIP4Q6PIL6 DTYMK-201ENST00000305784 1232 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
KCNIP4Q6PIL6 PPCS-202ENST00000372560 793 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
KCNIP4Q6PIL6 LINC01167-201ENST00000423232 604 ntTSL 3 BASIC14.39□□□□□ -0.11
KCNIP4Q6PIL6 ALG5-202ENST00000443765 1119 ntTSL 2 BASIC14.39□□□□□ -0.11
KCNIP4Q6PIL6 SFTPC-205ENST00000521315 1046 ntAPPRIS ALT1 TSL 1 (best) BASIC14.39□□□□□ -0.11
KCNIP4Q6PIL6 SLC39A3-203ENST00000545664 1219 ntTSL 2 BASIC14.39□□□□□ -0.11
KCNIP4Q6PIL6 AP003071.3-201ENST00000562506 366 ntTSL 3 BASIC14.39□□□□□ -0.11
KCNIP4Q6PIL6 MYRIP-202ENST00000396217 4877 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
KCNIP4Q6PIL6 TRIM41-202ENST00000351937 2696 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
KCNIP4Q6PIL6 EN2-201ENST00000297375 3395 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
KCNIP4Q6PIL6 PRR29-AS1-202ENST00000580942 2926 ntTSL 2 BASIC14.39□□□□□ -0.11
KCNIP4Q6PIL6 ARHGAP22-206ENST00000435790 2595 ntAPPRIS ALT2 TSL 2 BASIC14.39□□□□□ -0.11
KCNIP4Q6PIL6 NKILA-202ENST00000614771 2598 ntBASIC14.39□□□□□ -0.11
KCNIP4Q6PIL6 DMD-208ENST00000378680 1858 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
KCNIP4Q6PIL6 EGR2-203ENST00000439032 2844 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
KCNIP4Q6PIL6 AUNIP-201ENST00000374298 2116 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
KCNIP4Q6PIL6 RABL6-203ENST00000371663 3078 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
KCNIP4Q6PIL6 PAK4-202ENST00000358301 2739 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
KCNIP4Q6PIL6 AC087633.2-202ENST00000565166 1439 ntBASIC14.39□□□□□ -0.11
KCNIP4Q6PIL6 NEU1-206ENST00000375631 2045 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
KCNIP4Q6PIL6 PPP1CB-202ENST00000358506 4771 ntAPPRIS P1 TSL 5 BASIC14.39□□□□□ -0.11
KCNIP4Q6PIL6 CD55-203ENST00000367063 1691 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
KCNIP4Q6PIL6 SERPINH1-215ENST00000533603 2299 ntAPPRIS P1 TSL 2 BASIC14.39□□□□□ -0.11
KCNIP4Q6PIL6 RHOT1-201ENST00000333942 3133 ntAPPRIS ALT1 TSL 1 (best) BASIC14.39□□□□□ -0.11
KCNIP4Q6PIL6 EIF4H-202ENST00000353999 2503 ntAPPRIS ALT1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Retrieved 100 of 98,524 protein–RNA pairs in 36.8 ms