Protein–RNA interactions for Protein: Q6ISU1

PTCRA, Pre T-cell antigen receptor alpha, humanhuman

Predicted RBP Predictions only

Length 281 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTCRAQ6ISU1 HIST2H3D-201ENST00000331491 411 ntAPPRIS P1 BASIC19.1■□□□□ 0.65
PTCRAQ6ISU1 SMOX-204ENST00000346595 982 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
PTCRAQ6ISU1 C6orf99-202ENST00000367073 769 ntTSL 5 BASIC19.1■□□□□ 0.65
PTCRAQ6ISU1 HIST2H3PS2-201ENST00000392948 411 ntAPPRIS P1 BASIC19.1■□□□□ 0.65
PTCRAQ6ISU1 FAM8A3P-201ENST00000427218 844 ntBASIC19.1■□□□□ 0.65
PTCRAQ6ISU1 BPHL-208ENST00000434640 1186 ntTSL 5 BASIC19.1■□□□□ 0.65
PTCRAQ6ISU1 AL121672.1-201ENST00000439423 1181 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
PTCRAQ6ISU1 AC063976.1-201ENST00000457890 381 ntTSL 2 BASIC19.1■□□□□ 0.65
PTCRAQ6ISU1 EEF1D-238ENST00000531621 840 ntTSL 3 BASIC19.1■□□□□ 0.65
PTCRAQ6ISU1 TPD52L1-211ENST00000532429 1022 ntTSL 2 BASIC19.1■□□□□ 0.65
PTCRAQ6ISU1 ELOF1-204ENST00000587806 1172 ntTSL 2 BASIC19.1■□□□□ 0.65
PTCRAQ6ISU1 ANKRD20A8P-203ENST00000641373 517 ntBASIC19.1■□□□□ 0.65
PTCRAQ6ISU1 NPR3-203ENST00000415167 1753 ntAPPRIS P3 TSL 1 (best) BASIC19.1■□□□□ 0.65
PTCRAQ6ISU1 C17orf62-204ENST00000437807 2242 ntAPPRIS P1 TSL 2 BASIC19.1■□□□□ 0.65
PTCRAQ6ISU1 CARD9-201ENST00000371732 2123 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
PTCRAQ6ISU1 OLIG2-202ENST00000382357 2578 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
PTCRAQ6ISU1 PCDHB12-202ENST00000622978 2093 ntTSL 2 BASIC19.1■□□□□ 0.65
PTCRAQ6ISU1 ETV7-204ENST00000373738 1570 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
PTCRAQ6ISU1 SLC29A1-207ENST00000393841 2485 ntAPPRIS P1 TSL 2 BASIC19.1■□□□□ 0.65
PTCRAQ6ISU1 WDR18-204ENST00000587001 1465 ntTSL 5 BASIC19.09■□□□□ 0.65
PTCRAQ6ISU1 CACNB3-205ENST00000547392 2237 ntTSL 5 BASIC19.09■□□□□ 0.65
PTCRAQ6ISU1 FAM3A-208ENST00000419205 1763 ntTSL 2 BASIC19.09■□□□□ 0.65
PTCRAQ6ISU1 AL162377.1-201ENST00000618844 1793 ntBASIC19.09■□□□□ 0.65
PTCRAQ6ISU1 SCAND1-203ENST00000615116 1371 ntAPPRIS P1 TSL 5 BASIC19.09■□□□□ 0.65
PTCRAQ6ISU1 ATP9A-202ENST00000338821 8106 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
PTCRAQ6ISU1 GRB7-202ENST00000394204 1667 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
PTCRAQ6ISU1 NDUFAF3-202ENST00000326925 2012 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
PTCRAQ6ISU1 PF4-201ENST00000296029 604 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
PTCRAQ6ISU1 PRORY-201ENST00000382764 878 ntAPPRIS P1 TSL 5 BASIC19.09■□□□□ 0.65
PTCRAQ6ISU1 TCF20-203ENST00000404876 1058 ntTSL 3 BASIC19.09■□□□□ 0.65
PTCRAQ6ISU1 UNC93B6-202ENST00000528242 690 ntBASIC19.09■□□□□ 0.65
PTCRAQ6ISU1 HOPX-214ENST00000556614 1138 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
PTCRAQ6ISU1 FBF1-204ENST00000586631 621 ntAPPRIS ALT2 TSL 2 BASIC19.09■□□□□ 0.65
PTCRAQ6ISU1 AC010624.2-201ENST00000600998 575 ntTSL 5 BASIC19.09■□□□□ 0.65
PTCRAQ6ISU1 EML2-AS1-203ENST00000623430 886 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
PTCRAQ6ISU1 AC008735.5-201ENST00000623544 497 ntBASIC19.09■□□□□ 0.65
PTCRAQ6ISU1 TRMU-201ENST00000290846 1940 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
PTCRAQ6ISU1 ACADVL-202ENST00000350303 2191 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
PTCRAQ6ISU1 TSPAN4-204ENST00000397404 1462 ntAPPRIS P1 TSL 5 BASIC19.09■□□□□ 0.65
PTCRAQ6ISU1 KLC2-207ENST00000421552 2721 ntTSL 5 BASIC19.09■□□□□ 0.65
PTCRAQ6ISU1 SGTA-201ENST00000221566 2330 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
PTCRAQ6ISU1 BAZ1A-202ENST00000360310 6010 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
PTCRAQ6ISU1 ACVRL1-202ENST00000419526 1356 ntTSL 2 BASIC19.08■□□□□ 0.65
PTCRAQ6ISU1 EGFR-202ENST00000342916 2239 ntTSL 1 (best) BASIC19.08■□□□□ 0.65
PTCRAQ6ISU1 UBXN6-201ENST00000301281 1943 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
PTCRAQ6ISU1 TSPAN32-201ENST00000182290 1318 ntAPPRIS P2 TSL 1 (best) BASIC19.08■□□□□ 0.65
PTCRAQ6ISU1 TSPAN32-217ENST00000612299 1301 ntTSL 5 BASIC19.08■□□□□ 0.65
PTCRAQ6ISU1 AL391422.3-201ENST00000603791 2761 ntBASIC19.08■□□□□ 0.65
PTCRAQ6ISU1 CBX2-201ENST00000269399 1061 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
PTCRAQ6ISU1 BEX3-201ENST00000361298 921 ntTSL 2 BASIC19.08■□□□□ 0.64
PTCRAQ6ISU1 MRPS16-201ENST00000372940 866 ntTSL 2 BASIC19.08■□□□□ 0.64
PTCRAQ6ISU1 SELENOM-201ENST00000400299 694 ntAPPRIS P2 TSL 1 (best) BASIC19.08■□□□□ 0.64
PTCRAQ6ISU1 TCTN1-208ENST00000471804 718 ntTSL 3 BASIC19.08■□□□□ 0.64
PTCRAQ6ISU1 AC025183.1-201ENST00000506335 425 ntTSL 4 BASIC19.08■□□□□ 0.64
PTCRAQ6ISU1 AC105202.1-202ENST00000522060 834 ntTSL 3 BASIC19.08■□□□□ 0.64
PTCRAQ6ISU1 AC009533.2-201ENST00000543664 586 ntBASIC19.08■□□□□ 0.64
PTCRAQ6ISU1 AL589182.1-202ENST00000548416 533 ntTSL 4 BASIC19.08■□□□□ 0.64
PTCRAQ6ISU1 HTD2-201ENST00000461393 1508 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
PTCRAQ6ISU1 KRT81-202ENST00000615839 1505 ntAPPRIS ALT2 TSL 5 BASIC19.08■□□□□ 0.64
PTCRAQ6ISU1 ME3-212ENST00000543262 2311 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
PTCRAQ6ISU1 SNRPN-207ENST00000554227 1763 ntTSL 5 BASIC19.08■□□□□ 0.64
PTCRAQ6ISU1 AL512408.1-201ENST00000569378 2000 ntBASIC19.08■□□□□ 0.64
PTCRAQ6ISU1 ZNF852-201ENST00000436261 1968 ntAPPRIS P1 TSL 2 BASIC19.08■□□□□ 0.64
PTCRAQ6ISU1 PRPSAP2-201ENST00000268835 1910 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
PTCRAQ6ISU1 UAP1-201ENST00000271469 2377 ntAPPRIS ALT1 TSL 5 BASIC19.07■□□□□ 0.64
PTCRAQ6ISU1 ACTL6A-201ENST00000392662 1899 ntTSL 2 BASIC19.07■□□□□ 0.64
PTCRAQ6ISU1 SSH1-209ENST00000551165 2354 ntAPPRIS ALT2 TSL 1 (best) BASIC19.07■□□□□ 0.64
PTCRAQ6ISU1 SLC16A3-201ENST00000392339 2074 ntAPPRIS P1 TSL 5 BASIC19.07■□□□□ 0.64
PTCRAQ6ISU1 SLC16A3-202ENST00000392341 2086 ntAPPRIS P1 TSL 5 BASIC19.07■□□□□ 0.64
PTCRAQ6ISU1 DMPK-205ENST00000458663 2548 ntTSL 5 BASIC19.07■□□□□ 0.64
PTCRAQ6ISU1 AKT2-234ENST00000579047 2029 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
PTCRAQ6ISU1 CGREF1-201ENST00000260595 1177 ntAPPRIS ALT2 TSL 5 BASIC19.07■□□□□ 0.64
PTCRAQ6ISU1 SUSD4-203ENST00000344029 1056 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
PTCRAQ6ISU1 CSNK2B-203ENST00000375882 948 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
PTCRAQ6ISU1 TRIM36-203ENST00000379618 693 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
PTCRAQ6ISU1 ROMO1-205ENST00000397416 288 ntAPPRIS P1 TSL 3 BASIC19.07■□□□□ 0.64
PTCRAQ6ISU1 MIR503HG-203ENST00000441492 649 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
PTCRAQ6ISU1 AC069287.3-201ENST00000527297 589 ntTSL 5 BASIC19.07■□□□□ 0.64
PTCRAQ6ISU1 AC135050.2-203ENST00000529564 725 ntAPPRIS P1 TSL 4 BASIC19.07■□□□□ 0.64
PTCRAQ6ISU1 SNHG9-202ENST00000564014 471 ntBASIC19.07■□□□□ 0.64
PTCRAQ6ISU1 CEMP1-201ENST00000565480 519 ntAPPRIS ALT2 TSL 3 BASIC19.07■□□□□ 0.64
PTCRAQ6ISU1 AC133919.2-201ENST00000565965 589 ntTSL 4 BASIC19.07■□□□□ 0.64
PTCRAQ6ISU1 AC239800.4-201ENST00000603712 296 ntBASIC19.07■□□□□ 0.64
PTCRAQ6ISU1 CR381653.1-203ENST00000625153 577 ntTSL 5 BASIC19.07■□□□□ 0.64
PTCRAQ6ISU1 RASGRP2-210ENST00000394430 2174 ntTSL 2 BASIC19.07■□□□□ 0.64
PTCRAQ6ISU1 INTS4P1-201ENST00000438455 1935 ntBASIC19.07■□□□□ 0.64
PTCRAQ6ISU1 AL356309.3-201ENST00000624132 1934 ntBASIC19.07■□□□□ 0.64
PTCRAQ6ISU1 MRM3-201ENST00000304478 1809 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
PTCRAQ6ISU1 AP5S1-203ENST00000379573 1848 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
PTCRAQ6ISU1 AP006284.1-201ENST00000527620 2210 ntTSL 2 BASIC19.06■□□□□ 0.64
PTCRAQ6ISU1 AMZ2-203ENST00000392720 1378 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
PTCRAQ6ISU1 SLC22A17-211ENST00000637426 1563 ntAPPRIS ALT2 TSL 1 (best) BASIC19.06■□□□□ 0.64
PTCRAQ6ISU1 OTOP2-201ENST00000331427 2147 ntAPPRIS P1 TSL 5 BASIC19.06■□□□□ 0.64
PTCRAQ6ISU1 LPAR2-202ENST00000542587 2546 ntAPPRIS P1 TSL 2 BASIC19.06■□□□□ 0.64
PTCRAQ6ISU1 HNRNPUL2-201ENST00000301785 5106 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
PTCRAQ6ISU1 TRIM3-201ENST00000345851 2879 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
PTCRAQ6ISU1 KRT8P32-201ENST00000512863 1461 ntBASIC19.06■□□□□ 0.64
PTCRAQ6ISU1 ZNF593-201ENST00000270812 698 ntTSL 2 BASIC19.06■□□□□ 0.64
PTCRAQ6ISU1 NUDT6-201ENST00000304430 1169 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
PTCRAQ6ISU1 CALY-203ENST00000368558 825 ntTSL 5 BASIC19.06■□□□□ 0.64
Retrieved 100 of 98,524 protein–RNA pairs in 19.7 ms