Protein–RNA interactions for Protein: Q5JTY5

CBWD3, COBW domain-containing protein 3, humanhuman

Predictions only

Length 395 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CBWD3Q5JTY5 PHB2-202ENST00000440277 996 ntTSL 5 BASIC20.07■□□□□ 0.8
CBWD3Q5JTY5 UNC5B-AS1-201ENST00000447119 647 ntTSL 2 BASIC20.07■□□□□ 0.8
CBWD3Q5JTY5 REPIN1-210ENST00000482680 1029 ntTSL 2 BASIC20.07■□□□□ 0.8
CBWD3Q5JTY5 AC128688.1-201ENST00000487626 519 ntBASIC20.07■□□□□ 0.8
CBWD3Q5JTY5 SMIM1-203ENST00000561886 491 ntTSL 2 BASIC20.07■□□□□ 0.8
CBWD3Q5JTY5 INO80E-207ENST00000563197 2103 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
CBWD3Q5JTY5 AC005606.2-201ENST00000564438 614 ntTSL 2 BASIC20.07■□□□□ 0.8
CBWD3Q5JTY5 PPHLN1-213ENST00000549190 1777 ntTSL 5 BASIC20.07■□□□□ 0.8
CBWD3Q5JTY5 CORO6-212ENST00000584969 1416 ntAPPRIS ALT1 TSL 5 BASIC20.07■□□□□ 0.8
CBWD3Q5JTY5 MAFG-202ENST00000392366 1743 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
CBWD3Q5JTY5 PDE9A-206ENST00000380328 1875 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
CBWD3Q5JTY5 PRSS23-209ENST00000533902 2043 ntTSL 4 BASIC20.07■□□□□ 0.8
CBWD3Q5JTY5 LINC01568-207ENST00000641790 1380 ntBASIC20.07■□□□□ 0.8
CBWD3Q5JTY5 EGFL7-204ENST00000406555 1529 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
CBWD3Q5JTY5 PNKP-224ENST00000631020 1545 ntTSL 5 BASIC20.07■□□□□ 0.8
CBWD3Q5JTY5 KRT6A-201ENST00000330722 2310 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
CBWD3Q5JTY5 SNX11-201ENST00000359238 2315 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
CBWD3Q5JTY5 KIF1BP-204ENST00000626493 2337 ntTSL 5 BASIC20.07■□□□□ 0.8
CBWD3Q5JTY5 CNOT11-201ENST00000289382 2599 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
CBWD3Q5JTY5 ENDOV-225ENST00000522751 1475 ntTSL 5 BASIC20.06■□□□□ 0.8
CBWD3Q5JTY5 PDE9A-209ENST00000398227 1606 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
CBWD3Q5JTY5 GSDMD-201ENST00000262580 1762 ntAPPRIS P2 TSL 1 (best) BASIC20.06■□□□□ 0.8
CBWD3Q5JTY5 GTF2IRD2-207ENST00000625377 1910 ntTSL 5 BASIC20.06■□□□□ 0.8
CBWD3Q5JTY5 FCER2-201ENST00000346664 1596 ntAPPRIS P2 TSL 1 (best) BASIC20.06■□□□□ 0.8
CBWD3Q5JTY5 SNAPIN-201ENST00000368685 1030 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
CBWD3Q5JTY5 ECE1-203ENST00000374893 2484 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
CBWD3Q5JTY5 TUBA3C-201ENST00000400113 1551 ntAPPRIS P1 TSL 5 BASIC20.06■□□□□ 0.8
CBWD3Q5JTY5 AL354751.1-201ENST00000412768 1863 ntBASIC20.06■□□□□ 0.8
CBWD3Q5JTY5 LINC01063-201ENST00000441644 348 ntTSL 3 BASIC20.06■□□□□ 0.8
CBWD3Q5JTY5 GXYLT1P3-201ENST00000453058 1193 ntBASIC20.06■□□□□ 0.8
CBWD3Q5JTY5 AL365295.1-202ENST00000456100 562 ntTSL 4 BASIC20.06■□□□□ 0.8
CBWD3Q5JTY5 RPL29-204ENST00000479017 670 ntAPPRIS P1 TSL 3 BASIC20.06■□□□□ 0.8
CBWD3Q5JTY5 DIO1-206ENST00000525202 558 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
CBWD3Q5JTY5 SLC25A11-202ENST00000544061 952 ntTSL 3 BASIC20.06■□□□□ 0.8
CBWD3Q5JTY5 FCER2-205ENST00000597921 1560 ntAPPRIS P2 TSL 1 (best) BASIC20.06■□□□□ 0.8
CBWD3Q5JTY5 ZNF114-206ENST00000600687 1742 ntAPPRIS P1 TSL 5 BASIC20.06■□□□□ 0.8
CBWD3Q5JTY5 FP565260.3-205ENST00000620481 816 ntTSL 5 BASIC20.06■□□□□ 0.8
CBWD3Q5JTY5 CIZ1-226ENST00000629610 2855 ntAPPRIS ALT2 TSL 2 BASIC20.06■□□□□ 0.8
CBWD3Q5JTY5 SCD5-201ENST00000273908 1995 ntTSL 2 BASIC20.06■□□□□ 0.8
CBWD3Q5JTY5 AC027097.1-202ENST00000592201 1954 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
CBWD3Q5JTY5 TRPM4-213ENST00000599628 1829 ntTSL 2 BASIC20.06■□□□□ 0.8
CBWD3Q5JTY5 CCDC43-201ENST00000315286 2082 ntAPPRIS P2 TSL 1 (best) BASIC20.06■□□□□ 0.8
CBWD3Q5JTY5 ADORA1-202ENST00000337894 2919 ntAPPRIS P1 TSL 2 BASIC20.06■□□□□ 0.8
CBWD3Q5JTY5 NFIX-202ENST00000360105 5459 ntTSL 5 BASIC20.06■□□□□ 0.8
CBWD3Q5JTY5 NR1H2-202ENST00000411902 1466 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
CBWD3Q5JTY5 AC011416.4-201ENST00000639283 2195 ntTSL 5 BASIC20.05■□□□□ 0.8
CBWD3Q5JTY5 WDR37-206ENST00000620998 1303 ntTSL 5 BASIC20.05■□□□□ 0.8
CBWD3Q5JTY5 GUCA1A-201ENST00000053469 1874 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
CBWD3Q5JTY5 CCDC88B-202ENST00000356786 4915 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
CBWD3Q5JTY5 ETV7-202ENST00000340181 1719 ntAPPRIS P3 TSL 1 (best) BASIC20.05■□□□□ 0.8
CBWD3Q5JTY5 TMEM177-204ENST00000424086 1738 ntAPPRIS P1 TSL 2 BASIC20.05■□□□□ 0.8
CBWD3Q5JTY5 HS3ST3A1-201ENST00000284110 2527 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
CBWD3Q5JTY5 LRRC27-201ENST00000344079 1809 ntAPPRIS ALT2 TSL 2 BASIC20.05■□□□□ 0.8
CBWD3Q5JTY5 DOK4-218ENST00000569548 1848 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
CBWD3Q5JTY5 FUOM-201ENST00000278025 709 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
CBWD3Q5JTY5 CDHR4-201ENST00000343366 1188 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
CBWD3Q5JTY5 ADCYAP1-202ENST00000450565 918 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
CBWD3Q5JTY5 AC004448.5-201ENST00000579897 567 ntTSL 5 BASIC20.05■□□□□ 0.8
CBWD3Q5JTY5 NAT14-202ENST00000587400 416 ntTSL 5 BASIC20.05■□□□□ 0.8
CBWD3Q5JTY5 ZNF134-203ENST00000600344 483 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
CBWD3Q5JTY5 SLC9A6-202ENST00000370698 4631 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
CBWD3Q5JTY5 GRB7-202ENST00000394204 1667 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
CBWD3Q5JTY5 LRP1-204ENST00000553277 1693 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
CBWD3Q5JTY5 BIRC8-201ENST00000426466 2026 ntAPPRIS P1 BASIC20.05■□□□□ 0.8
CBWD3Q5JTY5 SHKBP1-201ENST00000291842 2363 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
CBWD3Q5JTY5 EGFL6-201ENST00000361306 2398 ntAPPRIS P3 TSL 1 (best) BASIC20.05■□□□□ 0.8
CBWD3Q5JTY5 EHMT1-204ENST00000462484 2707 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
CBWD3Q5JTY5 SUDS3-204ENST00000543473 4897 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
CBWD3Q5JTY5 CYSTM1-201ENST00000261811 1336 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
CBWD3Q5JTY5 STYXL1-208ENST00000451157 1570 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
CBWD3Q5JTY5 HOXB1-202ENST00000577092 1414 ntBASIC20.04■□□□□ 0.8
CBWD3Q5JTY5 FBXW9-203ENST00000587955 1437 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
CBWD3Q5JTY5 ADGRL1-202ENST00000361434 5610 ntAPPRIS P3 TSL 1 (best) BASIC20.04■□□□□ 0.8
CBWD3Q5JTY5 AL390961.4-201ENST00000623958 2535 ntBASIC20.04■□□□□ 0.8
CBWD3Q5JTY5 COL15A1-201ENST00000375001 5496 ntAPPRIS P2 TSL 1 (best) BASIC20.04■□□□□ 0.8
CBWD3Q5JTY5 CYP51A1P1-201ENST00000492267 1507 ntBASIC20.04■□□□□ 0.8
CBWD3Q5JTY5 AC140125.2-201ENST00000502515 1517 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
CBWD3Q5JTY5 NADK-201ENST00000341426 3235 ntAPPRIS P3 TSL 2 BASIC20.04■□□□□ 0.8
CBWD3Q5JTY5 S100A16-203ENST00000368705 956 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
CBWD3Q5JTY5 AP000593.1-201ENST00000393668 712 ntBASIC20.04■□□□□ 0.8
CBWD3Q5JTY5 ELF3-AS1-202ENST00000419190 788 ntTSL 2 BASIC20.04■□□□□ 0.8
CBWD3Q5JTY5 KRT18P23-201ENST00000435622 1283 ntBASIC20.04■□□□□ 0.8
CBWD3Q5JTY5 HMGB3P22-201ENST00000442010 597 ntTSL 2 BASIC20.04■□□□□ 0.8
CBWD3Q5JTY5 CCNJL-205ENST00000519673 940 ntTSL 2 BASIC20.04■□□□□ 0.8
CBWD3Q5JTY5 IRF3-222ENST00000599144 1117 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
CBWD3Q5JTY5 AC006942.1-201ENST00000600669 520 ntTSL 2 BASIC20.04■□□□□ 0.8
CBWD3Q5JTY5 TRAPPC6A-201ENST00000006275 805 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
CBWD3Q5JTY5 AL590627.2-201ENST00000637510 144 ntTSL 5 BASIC20.04■□□□□ 0.8
CBWD3Q5JTY5 EWSR1-207ENST00000406548 2207 ntAPPRIS ALT2 TSL 1 (best) BASIC20.04■□□□□ 0.8
CBWD3Q5JTY5 KRT86-202ENST00000423955 2217 ntAPPRIS P1 TSL 2 BASIC20.04■□□□□ 0.8
CBWD3Q5JTY5 FGFR1-238ENST00000532791 5590 ntAPPRIS ALT1 TSL 5 BASIC20.04■□□□□ 0.8
CBWD3Q5JTY5 RPS6KA1-204ENST00000374168 3186 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
CBWD3Q5JTY5 ARPC4-201ENST00000397261 2582 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
CBWD3Q5JTY5 ARID4B-203ENST00000366603 5946 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
CBWD3Q5JTY5 RRP7BP-201ENST00000357802 2375 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
CBWD3Q5JTY5 AMDHD2-203ENST00000413459 2049 ntTSL 2 BASIC20.03■□□□□ 0.8
CBWD3Q5JTY5 SOD2-206ENST00000452684 2045 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
CBWD3Q5JTY5 UBTF-202ENST00000343638 4684 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
CBWD3Q5JTY5 CLEC10A-201ENST00000254868 1797 ntAPPRIS P3 TSL 1 (best) BASIC20.03■□□□□ 0.8
CBWD3Q5JTY5 JAM2-202ENST00000400532 1757 ntAPPRIS ALT2 TSL 1 (best) BASIC20.03■□□□□ 0.8
Retrieved 100 of 98,524 protein–RNA pairs in 41.2 ms