Protein–RNA interactions for Protein: Q494W8

CHRFAM7A, CHRNA7-FAM7A fusion protein, humanhuman

Predictions only

Length 412 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHRFAM7AQ494W8 BEND4-202ENST00000504360 8692 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
CHRFAM7AQ494W8 CLASRP-201ENST00000221455 2234 ntAPPRIS P2 TSL 1 (best) BASIC16.27■□□□□ 0.2
CHRFAM7AQ494W8 CCDC27-201ENST00000294600 2176 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
CHRFAM7AQ494W8 MCCC1-214ENST00000610757 2410 ntTSL 5 BASIC16.27■□□□□ 0.2
CHRFAM7AQ494W8 PIK3R2-201ENST00000222254 4033 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
CHRFAM7AQ494W8 MGARP-201ENST00000398955 1339 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
CHRFAM7AQ494W8 AC004982.2-201ENST00000609497 1578 ntTSL 2 BASIC16.27■□□□□ 0.2
CHRFAM7AQ494W8 PLA2G12A-201ENST00000243501 5226 ntAPPRIS P2 TSL 1 (best) BASIC16.27■□□□□ 0.2
CHRFAM7AQ494W8 TRIM24-201ENST00000343526 8410 ntAPPRIS P3 TSL 1 (best) BASIC16.27■□□□□ 0.2
CHRFAM7AQ494W8 METTL21A-201ENST00000272839 1210 ntTSL 5 BASIC16.27■□□□□ 0.2
CHRFAM7AQ494W8 AC073343.2-203ENST00000366167 564 ntTSL 4 BASIC16.27■□□□□ 0.2
CHRFAM7AQ494W8 MCF2L-207ENST00000397024 490 ntTSL 5 BASIC16.27■□□□□ 0.2
CHRFAM7AQ494W8 CYB561D2-204ENST00000424512 1212 ntAPPRIS P1 TSL 5 BASIC16.27■□□□□ 0.2
CHRFAM7AQ494W8 MCRIP1-201ENST00000455127 1209 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
CHRFAM7AQ494W8 AC004803.1-203ENST00000539259 501 ntTSL 2 BASIC16.27■□□□□ 0.2
CHRFAM7AQ494W8 AC010203.1-204ENST00000548782 407 ntBASIC16.27■□□□□ 0.2
CHRFAM7AQ494W8 ISOC2-201ENST00000085068 1122 ntTSL 2 BASIC16.27■□□□□ 0.2
CHRFAM7AQ494W8 RAPH1-201ENST00000308091 2768 ntAPPRIS ALT2 TSL 1 (best) BASIC16.27■□□□□ 0.2
CHRFAM7AQ494W8 BMPER-201ENST00000297161 5031 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
CHRFAM7AQ494W8 DUSP4-201ENST00000240100 5537 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
CHRFAM7AQ494W8 GABBR1-202ENST00000376977 1739 ntTSL 1 (best) BASIC16.27■□□□□ 0.19
CHRFAM7AQ494W8 PDLIM2-205ENST00000397761 1491 ntAPPRIS P1 TSL 5 BASIC16.27■□□□□ 0.19
CHRFAM7AQ494W8 GOLGA4-208ENST00000444882 1451 ntTSL 1 (best) BASIC16.27■□□□□ 0.19
CHRFAM7AQ494W8 ITSN2-201ENST00000355123 6300 ntAPPRIS P4 TSL 1 (best) BASIC16.27■□□□□ 0.19
CHRFAM7AQ494W8 MSLN-207ENST00000566549 2418 ntAPPRIS ALT2 TSL 1 (best) BASIC16.27■□□□□ 0.19
CHRFAM7AQ494W8 EVI5L-201ENST00000270530 3855 ntTSL 1 (best) BASIC16.27■□□□□ 0.19
CHRFAM7AQ494W8 PSMD3-201ENST00000264639 2158 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
CHRFAM7AQ494W8 CTBP2-214ENST00000531469 1918 ntAPPRIS P1 TSL 2 BASIC16.27■□□□□ 0.19
CHRFAM7AQ494W8 VBP1-201ENST00000286428 1686 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
CHRFAM7AQ494W8 CD247-202ENST00000392122 1678 ntAPPRIS ALT1 TSL 1 (best) BASIC16.27■□□□□ 0.19
CHRFAM7AQ494W8 PPP1R12C-202ENST00000435544 2363 ntTSL 2 BASIC16.27■□□□□ 0.19
CHRFAM7AQ494W8 CHRND-201ENST00000258385 2112 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
CHRFAM7AQ494W8 CACNA1I-201ENST00000401624 6740 ntAPPRIS ALT2 TSL 1 (best) BASIC16.27■□□□□ 0.19
CHRFAM7AQ494W8 NUDT15-201ENST00000258662 2098 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
CHRFAM7AQ494W8 ANKRD2-201ENST00000298808 1350 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
CHRFAM7AQ494W8 FAM228B-210ENST00000615575 1357 ntAPPRIS P3 TSL 5 BASIC16.26■□□□□ 0.19
CHRFAM7AQ494W8 COMP-202ENST00000425807 2292 ntTSL 2 BASIC16.26■□□□□ 0.19
CHRFAM7AQ494W8 ANKS3-202ENST00000446014 2265 ntTSL 5 BASIC16.26■□□□□ 0.19
CHRFAM7AQ494W8 AEBP2-201ENST00000266508 3620 ntAPPRIS ALT2 TSL 1 (best) BASIC16.26■□□□□ 0.19
CHRFAM7AQ494W8 GCSH-201ENST00000315467 1597 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
CHRFAM7AQ494W8 CDCP1-201ENST00000296129 6006 ntAPPRIS P3 TSL 1 (best) BASIC16.26■□□□□ 0.19
CHRFAM7AQ494W8 NDUFB9-206ENST00000522532 1319 ntTSL 2 BASIC16.26■□□□□ 0.19
CHRFAM7AQ494W8 ZNF768-202ENST00000562803 1999 ntAPPRIS ALT2 TSL 3 BASIC16.26■□□□□ 0.19
CHRFAM7AQ494W8 SYNDIG1L-201ENST00000331628 2607 ntAPPRIS P1 TSL 5 BASIC16.26■□□□□ 0.19
CHRFAM7AQ494W8 SEC14L2-215ENST00000617837 2632 ntTSL 2 BASIC16.26■□□□□ 0.19
CHRFAM7AQ494W8 TFEB-203ENST00000358871 2188 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
CHRFAM7AQ494W8 KDELR3-201ENST00000216014 1728 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
CHRFAM7AQ494W8 ST3GAL4-203ENST00000392669 1724 ntAPPRIS ALT1 TSL 1 (best) BASIC16.26■□□□□ 0.19
CHRFAM7AQ494W8 OPRK1-205ENST00000612786 5196 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
CHRFAM7AQ494W8 LSM4-203ENST00000593829 1908 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
CHRFAM7AQ494W8 DNAJC4-201ENST00000321460 1015 ntAPPRIS ALT2 TSL 1 (best) BASIC16.26■□□□□ 0.19
CHRFAM7AQ494W8 CALM3-202ENST00000391918 702 ntTSL 2 BASIC16.26■□□□□ 0.19
CHRFAM7AQ494W8 LINC01786-202ENST00000453732 389 ntTSL 2 BASIC16.26■□□□□ 0.19
CHRFAM7AQ494W8 RPH3AL-203ENST00000536489 1235 ntTSL 2 BASIC16.26■□□□□ 0.19
CHRFAM7AQ494W8 AL133352.1-203ENST00000557395 1234 ntAPPRIS P5 TSL 2 BASIC16.26■□□□□ 0.19
CHRFAM7AQ494W8 METRN-205ENST00000568415 612 ntAPPRIS ALT2 TSL 3 BASIC16.26■□□□□ 0.19
CHRFAM7AQ494W8 METTL23-204ENST00000586752 904 ntTSL 2 BASIC16.26■□□□□ 0.19
CHRFAM7AQ494W8 AC090164.3-201ENST00000610780 2143 ntBASIC16.26■□□□□ 0.19
CHRFAM7AQ494W8 TRABD-201ENST00000303434 2329 ntAPPRIS P3 TSL 1 (best) BASIC16.26■□□□□ 0.19
CHRFAM7AQ494W8 MLST8-232ENST00000569417 1870 ntAPPRIS P3 TSL 1 (best) BASIC16.26■□□□□ 0.19
CHRFAM7AQ494W8 EPHX4-201ENST00000370383 1437 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
CHRFAM7AQ494W8 AC012414.5-201ENST00000564214 1602 ntTSL 5 BASIC16.26■□□□□ 0.19
CHRFAM7AQ494W8 MB21D2-201ENST00000392452 3368 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
CHRFAM7AQ494W8 RAB4A-201ENST00000366690 2966 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
CHRFAM7AQ494W8 PDE6B-202ENST00000429163 2120 ntTSL 2 BASIC16.25■□□□□ 0.19
CHRFAM7AQ494W8 KRT8-216ENST00000552551 2126 ntAPPRIS P1 TSL 2 BASIC16.25■□□□□ 0.19
CHRFAM7AQ494W8 APOLD1-202ENST00000356591 4646 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
CHRFAM7AQ494W8 USP39-202ENST00000409025 1946 ntTSL 5 BASIC16.25■□□□□ 0.19
CHRFAM7AQ494W8 ALDH7A1-215ENST00000553117 1935 ntTSL 2 BASIC16.25■□□□□ 0.19
CHRFAM7AQ494W8 C16orf59-210ENST00000569496 1911 ntAPPRIS ALT2 TSL 5 BASIC16.25■□□□□ 0.19
CHRFAM7AQ494W8 ZNF865-201ENST00000568956 4005 ntAPPRIS P1 TSL 2 BASIC16.25■□□□□ 0.19
CHRFAM7AQ494W8 GPR20-201ENST00000377741 1515 ntAPPRIS P1 TSL 3 BASIC16.25■□□□□ 0.19
CHRFAM7AQ494W8 ALKBH6-213ENST00000486389 1525 ntTSL 3 BASIC16.25■□□□□ 0.19
CHRFAM7AQ494W8 POLR3E-209ENST00000564209 2464 ntTSL 2 BASIC16.25■□□□□ 0.19
CHRFAM7AQ494W8 WIZP1-201ENST00000531444 2299 ntBASIC16.25■□□□□ 0.19
CHRFAM7AQ494W8 TJP1-212ENST00000614355 6977 ntAPPRIS ALT2 TSL 5 BASIC16.25■□□□□ 0.19
CHRFAM7AQ494W8 ZNF302-206ENST00000505242 2849 ntAPPRIS P3 TSL 1 (best) BASIC16.25■□□□□ 0.19
CHRFAM7AQ494W8 CABIN1-202ENST00000337989 2422 ntAPPRIS ALT2 TSL 1 (best) BASIC16.25■□□□□ 0.19
CHRFAM7AQ494W8 CD7-206ENST00000583376 1659 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
CHRFAM7AQ494W8 BACE1-201ENST00000313005 6326 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
CHRFAM7AQ494W8 MED25-212ENST00000618715 1467 ntTSL 5 BASIC16.25■□□□□ 0.19
CHRFAM7AQ494W8 ENOPH1-201ENST00000273920 2025 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
CHRFAM7AQ494W8 BAG3-201ENST00000369085 2571 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
CHRFAM7AQ494W8 ANKMY1-209ENST00000405523 1827 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
CHRFAM7AQ494W8 GPR6-201ENST00000275169 1089 ntAPPRIS P1 BASIC16.25■□□□□ 0.19
CHRFAM7AQ494W8 TSPY8-201ENST00000287721 1161 ntAPPRIS P5 TSL 1 (best) BASIC16.25■□□□□ 0.19
CHRFAM7AQ494W8 ST8SIA1-202ENST00000381424 1036 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
CHRFAM7AQ494W8 TSPY8-202ENST00000383000 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC16.25■□□□□ 0.19
CHRFAM7AQ494W8 TSPY2-202ENST00000383042 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC16.25■□□□□ 0.19
CHRFAM7AQ494W8 PRICKLE4-202ENST00000394260 1035 ntAPPRIS ALT2 TSL 2 BASIC16.25■□□□□ 0.19
CHRFAM7AQ494W8 PRICKLE4-203ENST00000394263 1155 ntAPPRIS P2 TSL 5 BASIC16.25■□□□□ 0.19
CHRFAM7AQ494W8 SLC25A48-202ENST00000412661 1148 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
CHRFAM7AQ494W8 AK4P3-201ENST00000418260 669 ntBASIC16.25■□□□□ 0.19
CHRFAM7AQ494W8 TSPY1-201ENST00000423647 1171 ntAPPRIS ALT2 TSL 1 (best) BASIC16.25■□□□□ 0.19
CHRFAM7AQ494W8 TSPY3-201ENST00000424594 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC16.25■□□□□ 0.19
CHRFAM7AQ494W8 TSPY10-201ENST00000428845 1161 ntAPPRIS P5 TSL 1 (best) BASIC16.25■□□□□ 0.19
CHRFAM7AQ494W8 SLC25A48-204ENST00000433282 1111 ntAPPRIS P1 TSL 5 BASIC16.25■□□□□ 0.19
CHRFAM7AQ494W8 TPM4P1-201ENST00000436100 807 ntBASIC16.25■□□□□ 0.19
CHRFAM7AQ494W8 TSPY10-202ENST00000444056 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC16.25■□□□□ 0.19
CHRFAM7AQ494W8 TSPY3-203ENST00000457222 1161 ntAPPRIS P5 TSL 1 (best) BASIC16.25■□□□□ 0.19
Retrieved 100 of 98,524 protein–RNA pairs in 21.8 ms