Protein–RNA interactions for Protein: Q15768

EFNB3, Ephrin-B3, humanhuman

Predictions only

Length 340 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EFNB3Q15768 PXMP4-201ENST00000217398 979 ntTSL 2 BASIC15.83■□□□□ 0.12
EFNB3Q15768 TMEM88-201ENST00000301599 875 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
EFNB3Q15768 ZFAND2A-201ENST00000316495 860 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
EFNB3Q15768 AP000593.1-201ENST00000393668 712 ntBASIC15.83■□□□□ 0.12
EFNB3Q15768 SCO2-202ENST00000395693 992 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
EFNB3Q15768 ZFAND2A-203ENST00000401903 968 ntTSL 3 BASIC15.83■□□□□ 0.12
EFNB3Q15768 BECN2-201ENST00000419583 1296 ntAPPRIS P1 BASIC15.83■□□□□ 0.12
EFNB3Q15768 TMEM243-203ENST00000433078 1273 ntAPPRIS P1 TSL 2 BASIC15.83■□□□□ 0.12
EFNB3Q15768 DMKN-212ENST00000443640 842 ntAPPRIS ALT2 TSL 5 BASIC15.83■□□□□ 0.12
EFNB3Q15768 CNP-204ENST00000472031 1019 ntTSL 2 BASIC15.83■□□□□ 0.12
EFNB3Q15768 LINC02317-201ENST00000555413 426 ntTSL 3 BASIC15.83■□□□□ 0.12
EFNB3Q15768 AC034238.1-212ENST00000596137 723 ntTSL 5 BASIC15.83■□□□□ 0.12
EFNB3Q15768 SPEG-225ENST00000617028 815 ntTSL 5 BASIC15.83■□□□□ 0.12
EFNB3Q15768 NOP14-AS1-202ENST00000505731 1999 ntTSL 2 BASIC15.83■□□□□ 0.12
EFNB3Q15768 NOTCH2NL-204ENST00000579793 1954 ntAPPRIS ALT2 TSL 2 BASIC15.83■□□□□ 0.12
EFNB3Q15768 PTRH1-204ENST00000419060 2692 ntAPPRIS P1 TSL 2 BASIC15.83■□□□□ 0.12
EFNB3Q15768 TNXA-203ENST00000507684 2038 ntBASIC15.83■□□□□ 0.12
EFNB3Q15768 IRF7-203ENST00000397566 2051 ntAPPRIS P4 TSL 1 (best) BASIC15.83■□□□□ 0.12
EFNB3Q15768 P3H4-201ENST00000355468 2791 ntAPPRIS P2 TSL 2 BASIC15.83■□□□□ 0.12
EFNB3Q15768 C6orf203-202ENST00000405204 1420 ntAPPRIS P1 TSL 2 BASIC15.83■□□□□ 0.12
EFNB3Q15768 TWIST2-202ENST00000612363 1404 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
EFNB3Q15768 ZFC3H1-211ENST00000552037 1484 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
EFNB3Q15768 RBM26-202ENST00000438724 5152 ntAPPRIS ALT1 TSL 1 (best) BASIC15.83■□□□□ 0.12
EFNB3Q15768 STMN4-202ENST00000350889 2288 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
EFNB3Q15768 MARK2-203ENST00000377810 4560 ntAPPRIS ALT2 TSL 5 BASIC15.83■□□□□ 0.12
EFNB3Q15768 ACSF3-202ENST00000378345 1541 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
EFNB3Q15768 GNB1-201ENST00000378609 3132 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
EFNB3Q15768 ATP6V1G2-205ENST00000303892 1588 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
EFNB3Q15768 FMN2-201ENST00000319653 6434 ntAPPRIS P1 TSL 5 BASIC15.83■□□□□ 0.12
EFNB3Q15768 AL357033.4-201ENST00000617703 1807 ntBASIC15.82■□□□□ 0.12
EFNB3Q15768 SSX2IP-210ENST00000605755 1933 ntTSL 2 BASIC15.82■□□□□ 0.12
EFNB3Q15768 CCT5-214ENST00000515676 1997 ntTSL 2 BASIC15.82■□□□□ 0.12
EFNB3Q15768 PODXL2-201ENST00000342480 2186 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
EFNB3Q15768 HMGA1-205ENST00000447654 2159 ntAPPRIS P4 TSL 1 (best) BASIC15.82■□□□□ 0.12
EFNB3Q15768 NOP14-202ENST00000398071 2535 ntAPPRIS ALT2 TSL 1 (best) BASIC15.82■□□□□ 0.12
EFNB3Q15768 MED30-201ENST00000297347 985 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
EFNB3Q15768 RPA2-201ENST00000313433 1237 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
EFNB3Q15768 AC093901.1-201ENST00000414886 778 ntTSL 5 BASIC15.82■□□□□ 0.12
EFNB3Q15768 PVRIG2P-201ENST00000435460 978 ntBASIC15.82■□□□□ 0.12
EFNB3Q15768 TRIM73-203ENST00000437796 1169 ntAPPRIS P2 TSL 1 (best) BASIC15.82■□□□□ 0.12
EFNB3Q15768 MYD88-206ENST00000443433 914 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
EFNB3Q15768 LINC01293-201ENST00000453951 1266 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
EFNB3Q15768 AC106791.1-202ENST00000508281 1148 ntTSL 2 BASIC15.82■□□□□ 0.12
EFNB3Q15768 NAT14-202ENST00000587400 416 ntTSL 5 BASIC15.82■□□□□ 0.12
EFNB3Q15768 AC016582.2-201ENST00000591908 446 ntTSL 3 BASIC15.82■□□□□ 0.12
EFNB3Q15768 SYNGR4-204ENST00000601610 859 ntTSL 3 BASIC15.82■□□□□ 0.12
EFNB3Q15768 CD177-202ENST00000607855 536 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
EFNB3Q15768 SPACA6-213ENST00000637797 1073 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
EFNB3Q15768 KCNA3-201ENST00000369769 2569 ntAPPRIS P1 BASIC15.82■□□□□ 0.12
EFNB3Q15768 NEK2-205ENST00000540251 1318 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
EFNB3Q15768 AGPAT2-205ENST00000538402 1357 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
EFNB3Q15768 RIMKLB-202ENST00000357529 5830 ntAPPRIS P1 TSL 5 BASIC15.82■□□□□ 0.12
EFNB3Q15768 EEF1AKMT2-201ENST00000368836 1462 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
EFNB3Q15768 MTMR9LP-203ENST00000426597 1545 ntBASIC15.82■□□□□ 0.12
EFNB3Q15768 EFEMP2-210ENST00000528176 1504 ntTSL 5 BASIC15.82■□□□□ 0.12
EFNB3Q15768 RND1-201ENST00000309739 1681 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
EFNB3Q15768 TMSB15B-201ENST00000419165 1666 ntAPPRIS P1 TSL 2 BASIC15.82■□□□□ 0.12
EFNB3Q15768 NFYC-AS1-201ENST00000606277 1687 ntBASIC15.82■□□□□ 0.12
EFNB3Q15768 ACBD5-201ENST00000375888 1747 ntAPPRIS ALT2 TSL 5 BASIC15.82■□□□□ 0.12
EFNB3Q15768 ZNF420-201ENST00000304239 1945 ntTSL 2 BASIC15.82■□□□□ 0.12
EFNB3Q15768 CLDND1-203ENST00000394181 2170 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
EFNB3Q15768 UMOD-203ENST00000396138 2399 ntAPPRIS ALT2 TSL 5 BASIC15.82■□□□□ 0.12
EFNB3Q15768 PIK3R1-201ENST00000320694 2625 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
EFNB3Q15768 TBX21-201ENST00000177694 2572 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
EFNB3Q15768 C1QTNF1-201ENST00000311661 2624 ntTSL 2 BASIC15.81■□□□□ 0.12
EFNB3Q15768 NPLOC4-201ENST00000331134 4415 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
EFNB3Q15768 MAP2K5-202ENST00000340972 1491 ntTSL 2 BASIC15.81■□□□□ 0.12
EFNB3Q15768 TM7SF3-201ENST00000343028 2709 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
EFNB3Q15768 APBB1IP-201ENST00000356785 1513 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
EFNB3Q15768 CYP2D7-201ENST00000358097 1655 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
EFNB3Q15768 MIR662-201ENST00000384847 95 ntBASIC15.81■□□□□ 0.12
EFNB3Q15768 PDLIM7-205ENST00000393551 1226 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
EFNB3Q15768 LDHAL6A-202ENST00000396213 1716 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
EFNB3Q15768 NFIB-208ENST00000397581 3318 ntTSL 5 BASIC15.81■□□□□ 0.12
EFNB3Q15768 TBC1D2B-202ENST00000409931 6086 ntAPPRIS P3 TSL 1 (best) BASIC15.81■□□□□ 0.12
EFNB3Q15768 EWSR1-208ENST00000414183 2189 ntAPPRIS P4 TSL 2 BASIC15.81■□□□□ 0.12
EFNB3Q15768 AL365232.1-201ENST00000423730 1636 ntAPPRIS P1 TSL 5 BASIC15.81■□□□□ 0.12
EFNB3Q15768 FAR2P2-204ENST00000424873 2070 ntTSL 2 BASIC15.81■□□□□ 0.12
EFNB3Q15768 FBXO24-202ENST00000427939 2087 ntTSL 2 BASIC15.81■□□□□ 0.12
EFNB3Q15768 VCX3B-203ENST00000444481 812 ntAPPRIS ALT2 TSL 5 BASIC15.81■□□□□ 0.12
EFNB3Q15768 THNSL2-205ENST00000449349 1616 ntTSL 5 BASIC15.81■□□□□ 0.12
EFNB3Q15768 AL691447.2-201ENST00000454869 2162 ntTSL 2 BASIC15.81■□□□□ 0.12
EFNB3Q15768 HOXB-AS3-203ENST00000465846 434 ntTSL 3 BASIC15.81■□□□□ 0.12
EFNB3Q15768 ERCC2-205ENST00000485403 1538 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
EFNB3Q15768 CSRP1-214ENST00000531916 890 ntTSL 5 BASIC15.81■□□□□ 0.12
EFNB3Q15768 C11orf80-214ENST00000532565 1948 ntAPPRIS ALT2 TSL 5 BASIC15.81■□□□□ 0.12
EFNB3Q15768 CCDC63-202ENST00000545036 1887 ntAPPRIS ALT2 TSL 2 BASIC15.81■□□□□ 0.12
EFNB3Q15768 AC010463.1-201ENST00000596542 1207 ntAPPRIS P1 TSL 2 BASIC15.81■□□□□ 0.12
EFNB3Q15768 VCX3A-203ENST00000612369 812 ntAPPRIS ALT2 TSL 5 BASIC15.81■□□□□ 0.12
EFNB3Q15768 SPAST-203ENST00000615843 5212 ntAPPRIS P4 TSL 1 (best) BASIC15.81■□□□□ 0.12
EFNB3Q15768 SLC16A3-221ENST00000617373 2048 ntAPPRIS P1 TSL 5 BASIC15.81■□□□□ 0.12
EFNB3Q15768 SLC16A3-222ENST00000619321 2015 ntAPPRIS P1 TSL 5 BASIC15.81■□□□□ 0.12
EFNB3Q15768 ADAMTS19-201ENST00000274487 5234 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
EFNB3Q15768 RNPEPL1-201ENST00000270357 5658 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
EFNB3Q15768 ZNF707-202ENST00000418203 2661 ntAPPRIS P1 TSL 5 BASIC15.81■□□□□ 0.12
EFNB3Q15768 C14orf79-202ENST00000547315 2370 ntAPPRIS P2 TSL 1 (best) BASIC15.8■□□□□ 0.12
EFNB3Q15768 KRT9-201ENST00000246662 2290 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
EFNB3Q15768 SLC47A1-202ENST00000395585 1998 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
EFNB3Q15768 NDRG2-227ENST00000554143 1980 ntAPPRIS ALT1 TSL 2 BASIC15.8■□□□□ 0.12
EFNB3Q15768 UTP18-201ENST00000225298 1894 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Retrieved 100 of 98,524 protein–RNA pairs in 56.7 ms