Protein–RNA interactions for Protein: Q01804

OTUD4, OTU domain-containing protein 4, humanhuman

Known RBP Predictions only

Length 1,114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
OTUD4Q01804 KCNH2-203ENST00000430723 2648 ntTSL 5 BASIC19.22■□□□□ 0.67
OTUD4Q01804 QSOX2-201ENST00000358701 4530 ntAPPRIS P1 TSL 2 BASIC19.22■□□□□ 0.67
OTUD4Q01804 ALDOC-201ENST00000226253 1982 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
OTUD4Q01804 AC008878.3-201ENST00000617428 4964 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
OTUD4Q01804 NSMAF-202ENST00000427130 3371 ntTSL 2 BASIC19.22■□□□□ 0.67
OTUD4Q01804 LRRC25-201ENST00000339007 2415 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
OTUD4Q01804 SULF2-201ENST00000359930 4915 ntAPPRIS P4 TSL 1 (best) BASIC19.22■□□□□ 0.67
OTUD4Q01804 ARID1A-201ENST00000324856 8577 ntAPPRIS P3 TSL 1 (best) BASIC19.22■□□□□ 0.67
OTUD4Q01804 MRPL3-202ENST00000425847 1457 ntTSL 2 BASIC19.22■□□□□ 0.67
OTUD4Q01804 OGFOD2-222ENST00000545317 1481 ntTSL 2 BASIC19.22■□□□□ 0.67
OTUD4Q01804 RUBCN-206ENST00000449205 1603 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
OTUD4Q01804 CTNNBL1-201ENST00000361383 1925 ntAPPRIS P2 TSL 1 (best) BASIC19.21■□□□□ 0.67
OTUD4Q01804 IFFO1-202ENST00000356896 2680 ntTSL 5 BASIC19.21■□□□□ 0.67
OTUD4Q01804 PRMT1-201ENST00000391851 1393 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
OTUD4Q01804 PXK-206ENST00000463280 2825 ntTSL 2 BASIC19.21■□□□□ 0.67
OTUD4Q01804 GPAT2P1-201ENST00000444924 1672 ntBASIC19.21■□□□□ 0.67
OTUD4Q01804 C8orf58-207ENST00000615223 1848 ntAPPRIS ALT2 TSL 5 BASIC19.21■□□□□ 0.67
OTUD4Q01804 GPATCH3-201ENST00000361720 2123 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
OTUD4Q01804 C19orf25-207ENST00000588871 2128 ntTSL 5 BASIC19.21■□□□□ 0.67
OTUD4Q01804 DDX42-202ENST00000389924 3939 ntAPPRIS P1 TSL 5 BASIC19.21■□□□□ 0.67
OTUD4Q01804 WDR74-201ENST00000278856 1289 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
OTUD4Q01804 SEC61A2-201ENST00000298428 1893 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
OTUD4Q01804 AL023284.2-201ENST00000405850 579 ntBASIC19.21■□□□□ 0.67
OTUD4Q01804 CCDC74B-204ENST00000409234 871 ntAPPRIS ALT2 TSL 1 (best) BASIC19.21■□□□□ 0.67
OTUD4Q01804 DCST1-204ENST00000423025 2199 ntAPPRIS ALT2 TSL 2 BASIC19.21■□□□□ 0.67
OTUD4Q01804 GLYCTK-205ENST00000473032 935 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
OTUD4Q01804 AC097488.1-201ENST00000507834 756 ntBASIC19.21■□□□□ 0.67
OTUD4Q01804 PENK-204ENST00000518770 863 ntTSL 2 BASIC19.21■□□□□ 0.67
OTUD4Q01804 PRSS23-209ENST00000533902 2043 ntTSL 4 BASIC19.21■□□□□ 0.67
OTUD4Q01804 CHEK2P2-202ENST00000555186 864 ntTSL 2 BASIC19.21■□□□□ 0.67
OTUD4Q01804 CBLN3-202ENST00000555436 718 ntTSL 3 BASIC19.21■□□□□ 0.67
OTUD4Q01804 AC003005.1-201ENST00000601674 582 ntAPPRIS P5 TSL 2 BASIC19.21■□□□□ 0.67
OTUD4Q01804 REXO1L10P-201ENST00000615707 1290 ntBASIC19.21■□□□□ 0.67
OTUD4Q01804 REXO1L12P-201ENST00000622156 912 ntBASIC19.21■□□□□ 0.67
OTUD4Q01804 AL049637.2-201ENST00000641778 930 ntBASIC19.21■□□□□ 0.67
OTUD4Q01804 LHX8-201ENST00000294638 2373 ntAPPRIS P3 TSL 1 (best) BASIC19.21■□□□□ 0.67
OTUD4Q01804 NOP9-202ENST00000396802 1942 ntTSL 5 BASIC19.21■□□□□ 0.67
OTUD4Q01804 SYT15-205ENST00000503753 1331 ntAPPRIS ALT2 TSL 1 (best) BASIC19.21■□□□□ 0.67
OTUD4Q01804 TEX13A-202ENST00000609007 1349 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
OTUD4Q01804 TMC5-203ENST00000396229 4917 ntAPPRIS ALT2 TSL 5 BASIC19.21■□□□□ 0.67
OTUD4Q01804 DNAJA3-203ENST00000431375 2294 ntTSL 2 BASIC19.21■□□□□ 0.67
OTUD4Q01804 PCCA-202ENST00000376285 2494 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
OTUD4Q01804 RNFT2-209ENST00000622220 2176 ntTSL 5 BASIC19.2■□□□□ 0.66
OTUD4Q01804 SMN2-202ENST00000380742 1388 ntAPPRIS ALT2 TSL 5 BASIC19.2■□□□□ 0.66
OTUD4Q01804 MROH1-202ENST00000423230 1712 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
OTUD4Q01804 PPP2R2B-203ENST00000394411 2071 ntAPPRIS P1 TSL 2 BASIC19.2■□□□□ 0.66
OTUD4Q01804 PRRT2-212ENST00000636619 2065 ntTSL 5 BASIC19.2■□□□□ 0.66
OTUD4Q01804 ETS1-208ENST00000535549 4594 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
OTUD4Q01804 VIPR1-201ENST00000325123 2773 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
OTUD4Q01804 DTX2-211ENST00000446600 2281 ntTSL 2 BASIC19.2■□□□□ 0.66
OTUD4Q01804 CDK10-202ENST00000353379 1798 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
OTUD4Q01804 ZNRF2-201ENST00000323037 3460 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
OTUD4Q01804 BUB3-202ENST00000368859 667 ntTSL 3 BASIC19.2■□□□□ 0.66
OTUD4Q01804 TRPT1-203ENST00000394547 865 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
OTUD4Q01804 IAH1-202ENST00000470914 2137 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
OTUD4Q01804 REPIN1-210ENST00000482680 1029 ntTSL 2 BASIC19.2■□□□□ 0.66
OTUD4Q01804 CIRBP-217ENST00000588230 1013 ntTSL 5 BASIC19.2■□□□□ 0.66
OTUD4Q01804 PPM1G-201ENST00000344034 2311 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
OTUD4Q01804 SEMA6D-205ENST00000389425 2318 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
OTUD4Q01804 EVX2-201ENST00000308618 4203 ntAPPRIS P1 TSL 5 BASIC19.2■□□□□ 0.66
OTUD4Q01804 NUDT17-201ENST00000334513 1473 ntAPPRIS P1 TSL 5 BASIC19.2■□□□□ 0.66
OTUD4Q01804 NRBP1-203ENST00000379852 2163 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
OTUD4Q01804 RBP4-202ENST00000371467 1314 ntAPPRIS P1 TSL 5 BASIC19.2■□□□□ 0.66
OTUD4Q01804 PCDH1-201ENST00000287008 4793 ntAPPRIS P3 TSL 5 BASIC19.2■□□□□ 0.66
OTUD4Q01804 ADCY6-206ENST00000550422 5877 ntTSL 2 BASIC19.2■□□□□ 0.66
OTUD4Q01804 TNPO2-203ENST00000450764 4993 ntAPPRIS ALT1 TSL 1 (best) BASIC19.2■□□□□ 0.66
OTUD4Q01804 RXRB-202ENST00000374685 2846 ntAPPRIS ALT1 TSL 1 (best) BASIC19.2■□□□□ 0.66
OTUD4Q01804 AC135776.1-201ENST00000319817 2481 ntBASIC19.19■□□□□ 0.66
OTUD4Q01804 INO80E-207ENST00000563197 2103 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
OTUD4Q01804 MYLKP1-201ENST00000509077 1580 ntBASIC19.19■□□□□ 0.66
OTUD4Q01804 HNF1A-202ENST00000400024 2337 ntTSL 2 BASIC19.19■□□□□ 0.66
OTUD4Q01804 SOD2-206ENST00000452684 2045 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
OTUD4Q01804 GPM6B-204ENST00000398361 1033 ntTSL 2 BASIC19.19■□□□□ 0.66
OTUD4Q01804 WDR86-AS1-203ENST00000480632 704 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
OTUD4Q01804 AC092718.1-201ENST00000501068 1088 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
OTUD4Q01804 KRT18P41-201ENST00000518924 1277 ntBASIC19.19■□□□□ 0.66
OTUD4Q01804 LINC02167-201ENST00000562769 594 ntTSL 3 BASIC19.19■□□□□ 0.66
OTUD4Q01804 TGIF1-222ENST00000577543 729 ntTSL 3 BASIC19.19■□□□□ 0.66
OTUD4Q01804 AP001412.1-201ENST00000608405 714 ntBASIC19.19■□□□□ 0.66
OTUD4Q01804 BX649632.1-201ENST00000610187 819 ntTSL 3 BASIC19.19■□□□□ 0.66
OTUD4Q01804 MAPRE3-201ENST00000233121 1892 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
OTUD4Q01804 AC116565.2-201ENST00000637674 1854 ntTSL 2 BASIC19.19■□□□□ 0.66
OTUD4Q01804 DNLZ-202ENST00000371739 2934 ntTSL 5 BASIC19.19■□□□□ 0.66
OTUD4Q01804 SAMD11-212ENST00000617307 2314 ntAPPRIS ALT2 TSL 5 BASIC19.19■□□□□ 0.66
OTUD4Q01804 OSMR-202ENST00000502536 1740 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
OTUD4Q01804 DPYSL4-202ENST00000368627 1545 ntTSL 5 BASIC19.19■□□□□ 0.66
OTUD4Q01804 NFKB2-201ENST00000189444 3011 ntAPPRIS ALT1 TSL 1 (best) BASIC19.19■□□□□ 0.66
OTUD4Q01804 MBD1-206ENST00000382948 2434 ntAPPRIS P3 TSL 2 BASIC19.19■□□□□ 0.66
OTUD4Q01804 APBB1-210ENST00000530885 1626 ntTSL 2 BASIC19.18■□□□□ 0.66
OTUD4Q01804 SERPINH1-215ENST00000533603 2299 ntAPPRIS P1 TSL 2 BASIC19.18■□□□□ 0.66
OTUD4Q01804 HOXB6-201ENST00000225648 1660 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
OTUD4Q01804 COQ9-210ENST00000567072 1482 ntTSL 3 BASIC19.18■□□□□ 0.66
OTUD4Q01804 NDUFA12-201ENST00000327772 635 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
OTUD4Q01804 RAC1-202ENST00000356142 907 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
OTUD4Q01804 RAP1B-203ENST00000378985 1017 ntTSL 2 BASIC19.18■□□□□ 0.66
OTUD4Q01804 RAP1B-221ENST00000540209 1264 ntTSL 2 BASIC19.18■□□□□ 0.66
OTUD4Q01804 AL049780.2-201ENST00000556236 367 ntTSL 3 BASIC19.18■□□□□ 0.66
OTUD4Q01804 AC008649.1-201ENST00000589557 516 ntTSL 2 BASIC19.18■□□□□ 0.66
OTUD4Q01804 DECR2-212ENST00000627716 352 ntTSL 2 BASIC19.18■□□□□ 0.66
OTUD4Q01804 FAM46A-203ENST00000369756 5537 ntAPPRIS ALT2 TSL 1 (best) BASIC19.18■□□□□ 0.66
Retrieved 100 of 98,524 protein–RNA pairs in 11.8 ms