Protein–RNA interactions for Protein: P62068

USP46, Ubiquitin carboxyl-terminal hydrolase 46, humanhuman

Predictions only

Length 366 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP46P62068 FAM86B2-202ENST00000309608 806 ntTSL 3 BASIC19.54■□□□□ 0.72
USP46P62068 RPA2-201ENST00000313433 1237 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
USP46P62068 MRPL24-202ENST00000368211 883 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
USP46P62068 AC115618.1-201ENST00000376775 549 ntTSL 3 BASIC19.54■□□□□ 0.72
USP46P62068 NMRK1-202ENST00000376808 1121 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
USP46P62068 INSL3-202ENST00000379695 899 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
USP46P62068 CRELD2-204ENST00000407217 1230 ntAPPRIS ALT2 TSL 1 (best) BASIC19.54■□□□□ 0.72
USP46P62068 AC008825.1-201ENST00000504398 452 ntTSL 3 BASIC19.54■□□□□ 0.72
USP46P62068 HELT-202ENST00000505610 846 ntAPPRIS ALT1 TSL 1 (best) BASIC19.54■□□□□ 0.72
USP46P62068 AP000777.3-201ENST00000538705 491 ntTSL 3 BASIC19.54■□□□□ 0.72
USP46P62068 PRTN3-202ENST00000544537 1036 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
USP46P62068 AC140504.1-202ENST00000568222 652 ntTSL 5 BASIC19.54■□□□□ 0.72
USP46P62068 SPINK2-207ENST00000631082 392 ntTSL 5 BASIC19.54■□□□□ 0.72
USP46P62068 AC005906.2-206ENST00000638180 1029 ntTSL 5 BASIC19.54■□□□□ 0.72
USP46P62068 TULP1-208ENST00000614066 2084 ntAPPRIS ALT2 TSL 5 BASIC19.54■□□□□ 0.72
USP46P62068 AC034236.2-201ENST00000606662 1610 ntBASIC19.54■□□□□ 0.72
USP46P62068 STARD4-203ENST00000502322 1467 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
USP46P62068 TRIM7-205ENST00000422067 1954 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
USP46P62068 TUBA3FP-202ENST00000422086 1974 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
USP46P62068 OGFOD2-207ENST00000536150 1956 ntTSL 2 BASIC19.53■□□□□ 0.72
USP46P62068 SAMD11-211ENST00000616125 2230 ntAPPRIS ALT2 TSL 5 BASIC19.53■□□□□ 0.72
USP46P62068 ADGRD2-201ENST00000334810 3244 ntAPPRIS P1 TSL 5 BASIC19.53■□□□□ 0.72
USP46P62068 PSRC1-202ENST00000369904 1584 ntAPPRIS ALT2 TSL 1 (best) BASIC19.53■□□□□ 0.72
USP46P62068 HDAC11-221ENST00000522202 1559 ntAPPRIS ALT2 TSL 2 BASIC19.53■□□□□ 0.72
USP46P62068 CXXC4-201ENST00000394767 5565 ntAPPRIS P1 TSL 5 BASIC19.53■□□□□ 0.72
USP46P62068 AD000671.2-201ENST00000589807 1925 ntAPPRIS P1 TSL 2 BASIC19.53■□□□□ 0.72
USP46P62068 SSX2IP-210ENST00000605755 1933 ntTSL 2 BASIC19.53■□□□□ 0.72
USP46P62068 AIRE-201ENST00000291582 2257 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
USP46P62068 SCARB1-201ENST00000261693 2611 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
USP46P62068 CEP55-201ENST00000371485 2638 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
USP46P62068 FAM3A-204ENST00000369643 1521 ntAPPRIS P1 TSL 2 BASIC19.53■□□□□ 0.72
USP46P62068 TMEM171-201ENST00000287773 1247 ntAPPRIS ALT1 TSL 5 BASIC19.53■□□□□ 0.72
USP46P62068 NMU-205ENST00000511469 756 ntTSL 3 BASIC19.53■□□□□ 0.72
USP46P62068 AC104390.1-201ENST00000555663 520 ntBASIC19.53■□□□□ 0.72
USP46P62068 FXYD7-203ENST00000586063 456 ntAPPRIS ALT2 TSL 3 BASIC19.53■□□□□ 0.72
USP46P62068 NBPF14-202ENST00000593495 1082 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
USP46P62068 TMEM114-203ENST00000620492 945 ntAPPRIS P1 TSL 2 BASIC19.53■□□□□ 0.72
USP46P62068 PDZD3-203ENST00000525131 1882 ntTSL 2 BASIC19.53■□□□□ 0.72
USP46P62068 RNF113B-201ENST00000267291 1376 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
USP46P62068 CA7-202ENST00000394069 1713 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
USP46P62068 C7orf49-202ENST00000424142 1738 ntTSL 2 BASIC19.53■□□□□ 0.72
USP46P62068 PDCD10-201ENST00000392750 2067 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
USP46P62068 DDX59-201ENST00000331314 2289 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
USP46P62068 EDNRA-206ENST00000511804 1569 ntTSL 2 BASIC19.53■□□□□ 0.72
USP46P62068 PODN-203ENST00000395871 2744 ntTSL 5 BASIC19.53■□□□□ 0.72
USP46P62068 STARD10-213ENST00000538536 1678 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
USP46P62068 ATP6V0A2-201ENST00000330342 6542 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
USP46P62068 MMAB-204ENST00000537236 1342 ntTSL 3 BASIC19.52■□□□□ 0.72
USP46P62068 TCTA-201ENST00000273590 2146 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
USP46P62068 Z98044.1-201ENST00000632503 1764 ntBASIC19.52■□□□□ 0.72
USP46P62068 MARK1-203ENST00000402574 5273 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
USP46P62068 ERCC2-203ENST00000391944 2334 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
USP46P62068 PHKA1-204ENST00000373545 6173 ntTSL 5 BASIC19.52■□□□□ 0.72
USP46P62068 SHF-201ENST00000290894 2500 ntAPPRIS P3 TSL 2 BASIC19.52■□□□□ 0.72
USP46P62068 FGFR3-210ENST00000613647 4438 ntTSL 5 BASIC19.52■□□□□ 0.72
USP46P62068 ACBD5-201ENST00000375888 1747 ntAPPRIS ALT2 TSL 5 BASIC19.52■□□□□ 0.72
USP46P62068 FAM187B-201ENST00000324675 1184 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
USP46P62068 SURF4-206ENST00000485435 1206 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
USP46P62068 ZNF706-206ENST00000519744 785 ntTSL 3 BASIC19.52■□□□□ 0.72
USP46P62068 AC010240.3-201ENST00000607688 395 ntBASIC19.52■□□□□ 0.72
USP46P62068 CLN6-214ENST00000636314 442 ntTSL 3 BASIC19.52■□□□□ 0.72
USP46P62068 ARAP1-AS2-201ENST00000500163 1824 ntTSL 2 BASIC19.52■□□□□ 0.72
USP46P62068 C16orf59-210ENST00000569496 1911 ntAPPRIS ALT2 TSL 5 BASIC19.52■□□□□ 0.72
USP46P62068 AC018445.3-201ENST00000624177 1945 ntBASIC19.52■□□□□ 0.72
USP46P62068 BST1-201ENST00000265016 1480 ntAPPRIS P2 TSL 1 (best) BASIC19.52■□□□□ 0.72
USP46P62068 ACBD4-207ENST00000586346 1579 ntTSL 1 (best) BASIC19.52■□□□□ 0.71
USP46P62068 LEMD2-201ENST00000293760 2958 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.71
USP46P62068 MMP9-201ENST00000372330 2336 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.71
USP46P62068 CEP78-202ENST00000376597 2618 ntAPPRIS P4 TSL 1 (best) BASIC19.52■□□□□ 0.71
USP46P62068 NFKBIZ-201ENST00000326151 2058 ntTSL 2 BASIC19.52■□□□□ 0.71
USP46P62068 SRRM2-AS1-203ENST00000571305 1344 ntTSL 2 BASIC19.51■□□□□ 0.71
USP46P62068 MEPCE-202ENST00000414441 2261 ntTSL 2 BASIC19.51■□□□□ 0.71
USP46P62068 KRT8P7-201ENST00000533003 1432 ntBASIC19.51■□□□□ 0.71
USP46P62068 STEAP1B-201ENST00000404369 1515 ntAPPRIS ALT2 TSL 1 (best) BASIC19.51■□□□□ 0.71
USP46P62068 MTSS1-203ENST00000431961 1711 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
USP46P62068 GCOM1-202ENST00000380569 1846 ntAPPRIS P3 TSL 2 BASIC19.51■□□□□ 0.71
USP46P62068 CHRNA10-201ENST00000250699 1945 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
USP46P62068 USP39-202ENST00000409025 1946 ntTSL 5 BASIC19.51■□□□□ 0.71
USP46P62068 C11orf80-214ENST00000532565 1948 ntAPPRIS ALT2 TSL 5 BASIC19.51■□□□□ 0.71
USP46P62068 ASMTL-201ENST00000381317 2027 ntAPPRIS P3 TSL 1 (best) BASIC19.51■□□□□ 0.71
USP46P62068 SLC12A4-202ENST00000422611 4670 ntTSL 2 BASIC19.51■□□□□ 0.71
USP46P62068 TTC19-201ENST00000261647 3002 ntAPPRIS P2 TSL 1 (best) BASIC19.51■□□□□ 0.71
USP46P62068 NDUFA12-201ENST00000327772 635 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
USP46P62068 CD1E-211ENST00000368166 1271 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
USP46P62068 PDLIM7-205ENST00000393551 1226 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
USP46P62068 AK2-204ENST00000467905 880 ntAPPRIS ALT1 TSL 2 BASIC19.51■□□□□ 0.71
USP46P62068 MFGE8-203ENST00000542878 1172 ntTSL 2 BASIC19.51■□□□□ 0.71
USP46P62068 NAT14-202ENST00000587400 416 ntTSL 5 BASIC19.51■□□□□ 0.71
USP46P62068 ILKAP-212ENST00000622223 1088 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
USP46P62068 ANKRD36-207ENST00000639293 1168 ntAPPRIS ALT2 TSL 5 BASIC19.51■□□□□ 0.71
USP46P62068 C1QTNF1-209ENST00000581774 1368 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
USP46P62068 EEF1AKMT2-201ENST00000368836 1462 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
USP46P62068 SRP9-203ENST00000366839 1596 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
USP46P62068 AL512380.2-201ENST00000637901 1780 ntTSL 5 BASIC19.51■□□□□ 0.71
USP46P62068 SLC25A20-201ENST00000319017 1879 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
USP46P62068 STXBP2-202ENST00000414284 1859 ntAPPRIS ALT1 TSL 1 (best) BASIC19.51■□□□□ 0.71
USP46P62068 ADORA2A-215ENST00000618076 2630 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
USP46P62068 RNF135-201ENST00000324689 1905 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
USP46P62068 AL365232.1-201ENST00000423730 1636 ntAPPRIS P1 TSL 5 BASIC19.51■□□□□ 0.71
USP46P62068 THNSL2-205ENST00000449349 1616 ntTSL 5 BASIC19.51■□□□□ 0.71
Retrieved 100 of 98,524 protein–RNA pairs in 41.7 ms