Protein–RNA interactions for Protein: P61619

SEC61A1, Protein transport protein Sec61 subunit alpha isoform 1, humanhuman

Known RBP Predictions only

Length 476 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SEC61A1P61619 GDAP1L1-202ENST00000372952 722 ntTSL 5 BASIC16.27■□□□□ 0.2
SEC61A1P61619 HDAC11-203ENST00000402271 1018 ntTSL 3 BASIC16.27■□□□□ 0.2
SEC61A1P61619 NIFKP9-201ENST00000419265 221 ntBASIC16.27■□□□□ 0.2
SEC61A1P61619 NCF1B-202ENST00000432102 930 ntTSL 2 BASIC16.27■□□□□ 0.2
SEC61A1P61619 BX322234.1-201ENST00000444188 980 ntTSL 3 BASIC16.27■□□□□ 0.2
SEC61A1P61619 BABAM1-202ENST00000447614 930 ntAPPRIS ALT2 TSL 5 BASIC16.27■□□□□ 0.2
SEC61A1P61619 LINC00636-201ENST00000494231 1264 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
SEC61A1P61619 KRT18P16-201ENST00000510337 1294 ntBASIC16.27■□□□□ 0.2
SEC61A1P61619 AP003071.4-201ENST00000562276 1284 ntBASIC16.27■□□□□ 0.2
SEC61A1P61619 UBL5-202ENST00000586895 432 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
SEC61A1P61619 AL353708.3-201ENST00000610272 989 ntBASIC16.27■□□□□ 0.2
SEC61A1P61619 CR392000.1-201ENST00000624770 1228 ntBASIC16.27■□□□□ 0.2
SEC61A1P61619 SMARCC2-201ENST00000267064 4076 ntAPPRIS P4 TSL 1 (best) BASIC16.27■□□□□ 0.2
SEC61A1P61619 WDR34-201ENST00000372715 1755 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
SEC61A1P61619 TRIM63-201ENST00000374272 1770 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
SEC61A1P61619 TEX264-204ENST00000415259 2290 ntAPPRIS P3 TSL 5 BASIC16.27■□□□□ 0.2
SEC61A1P61619 SEL1L3-202ENST00000399878 4520 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
SEC61A1P61619 CELF6-205ENST00000567083 1496 ntAPPRIS ALT2 TSL 2 BASIC16.27■□□□□ 0.19
SEC61A1P61619 PIGQ-204ENST00000409527 1915 ntAPPRIS P1 TSL 2 BASIC16.27■□□□□ 0.19
SEC61A1P61619 PPP1R12C-202ENST00000435544 2363 ntTSL 2 BASIC16.27■□□□□ 0.19
SEC61A1P61619 SNX11-203ENST00000452859 1601 ntTSL 2 BASIC16.27■□□□□ 0.19
SEC61A1P61619 IL15-201ENST00000296545 2472 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
SEC61A1P61619 SNX19-209ENST00000530356 1562 ntTSL 2 BASIC16.26■□□□□ 0.19
SEC61A1P61619 AL031598.1-201ENST00000561511 1773 ntBASIC16.26■□□□□ 0.19
SEC61A1P61619 PSKH2-201ENST00000276616 1322 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
SEC61A1P61619 RABL2B-205ENST00000395595 2428 ntAPPRIS ALT2 TSL 1 (best) BASIC16.26■□□□□ 0.19
SEC61A1P61619 PGAP1-204ENST00000409475 2443 ntTSL 2 BASIC16.26■□□□□ 0.19
SEC61A1P61619 P3H4-202ENST00000393928 2601 ntAPPRIS P2 TSL 1 (best) BASIC16.26■□□□□ 0.19
SEC61A1P61619 MAP7-203ENST00000438100 2633 ntAPPRIS ALT2 TSL 2 BASIC16.26■□□□□ 0.19
SEC61A1P61619 WDR90-215ENST00000549091 5589 ntAPPRIS ALT2 TSL 5 BASIC16.26■□□□□ 0.19
SEC61A1P61619 PANX1-201ENST00000227638 2769 ntAPPRIS P2 TSL 1 (best) BASIC16.26■□□□□ 0.19
SEC61A1P61619 ZFYVE1-202ENST00000394207 1183 ntTSL 2 BASIC16.26■□□□□ 0.19
SEC61A1P61619 COL11A2-204ENST00000395194 1194 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
SEC61A1P61619 CTNNBIP1-204ENST00000400904 1206 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
SEC61A1P61619 METTL21A-206ENST00000432416 869 ntTSL 3 BASIC16.26■□□□□ 0.19
SEC61A1P61619 CCK-203ENST00000434608 747 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
SEC61A1P61619 TUBB8P6-201ENST00000436895 1288 ntBASIC16.26■□□□□ 0.19
SEC61A1P61619 AL355355.2-201ENST00000442321 338 ntBASIC16.26■□□□□ 0.19
SEC61A1P61619 IRF3-222ENST00000599144 1117 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
SEC61A1P61619 MELTF-202ENST00000296351 1650 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
SEC61A1P61619 MTFR1L-202ENST00000374301 2099 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
SEC61A1P61619 KCNC2-203ENST00000393288 2485 ntAPPRIS ALT2 TSL 1 (best) BASIC16.26■□□□□ 0.19
SEC61A1P61619 TP73-AS1-203ENST00000423764 2875 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
SEC61A1P61619 PCDH7-206ENST00000543491 4457 ntAPPRIS ALT2 BASIC16.26■□□□□ 0.19
SEC61A1P61619 STK25-203ENST00000403346 2210 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
SEC61A1P61619 ZNF302-201ENST00000423823 2590 ntAPPRIS P3 TSL 1 (best) BASIC16.26■□□□□ 0.19
SEC61A1P61619 HYOU1-212ENST00000532519 2162 ntTSL 5 BASIC16.26■□□□□ 0.19
SEC61A1P61619 DHRS12-201ENST00000218981 1970 ntTSL 2 BASIC16.26■□□□□ 0.19
SEC61A1P61619 LIN28B-AS1-203ENST00000636682 1797 ntTSL 3 BASIC16.26■□□□□ 0.19
SEC61A1P61619 FEZF1-202ENST00000427185 1368 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
SEC61A1P61619 CEMP1-202ENST00000567119 1374 ntAPPRIS P2 BASIC16.26■□□□□ 0.19
SEC61A1P61619 CENPT-208ENST00000562787 2345 ntAPPRIS P2 TSL 2 BASIC16.25■□□□□ 0.19
SEC61A1P61619 CTBP2-214ENST00000531469 1918 ntAPPRIS P1 TSL 2 BASIC16.25■□□□□ 0.19
SEC61A1P61619 FAM213B-202ENST00000378425 2665 ntAPPRIS ALT2 TSL 2 BASIC16.25■□□□□ 0.19
SEC61A1P61619 DNAL4-201ENST00000216068 1504 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
SEC61A1P61619 B4GALT1-202ENST00000535206 1535 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
SEC61A1P61619 PCDHA8-202ENST00000531613 5260 ntAPPRIS P2 TSL 1 (best) BASIC16.25■□□□□ 0.19
SEC61A1P61619 MORF4L1-215ENST00000559345 1468 ntTSL 2 BASIC16.25■□□□□ 0.19
SEC61A1P61619 GMPPA-213ENST00000622191 1473 ntTSL 5 BASIC16.25■□□□□ 0.19
SEC61A1P61619 SAE1-201ENST00000270225 2049 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
SEC61A1P61619 PODNL1-203ENST00000538371 1826 ntAPPRIS ALT2 TSL 2 BASIC16.25■□□□□ 0.19
SEC61A1P61619 OR10H2-201ENST00000305899 1041 ntAPPRIS P1 BASIC16.25■□□□□ 0.19
SEC61A1P61619 FAM26F-202ENST00000368605 1117 ntAPPRIS P1 TSL 5 BASIC16.25■□□□□ 0.19
SEC61A1P61619 CCT7-202ENST00000398422 1234 ntTSL 2 BASIC16.25■□□□□ 0.19
SEC61A1P61619 COQ10B-203ENST00000409398 879 ntTSL 3 BASIC16.25■□□□□ 0.19
SEC61A1P61619 SMIM1-201ENST00000444870 546 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
SEC61A1P61619 GCFC2-207ENST00000470503 1066 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
SEC61A1P61619 ATP6V0E1-204ENST00000519911 718 ntTSL 2 BASIC16.25■□□□□ 0.19
SEC61A1P61619 SLC39A13-212ENST00000531974 856 ntTSL 2 BASIC16.25■□□□□ 0.19
SEC61A1P61619 BX088651.1-201ENST00000540551 451 ntBASIC16.25■□□□□ 0.19
SEC61A1P61619 AC117500.4-201ENST00000542797 617 ntTSL 3 BASIC16.25■□□□□ 0.19
SEC61A1P61619 AC134349.1-201ENST00000543969 385 ntTSL 3 BASIC16.25■□□□□ 0.19
SEC61A1P61619 AC003005.1-201ENST00000601674 582 ntAPPRIS P5 TSL 2 BASIC16.25■□□□□ 0.19
SEC61A1P61619 AC073912.3-201ENST00000624414 853 ntBASIC16.25■□□□□ 0.19
SEC61A1P61619 CRTC1-201ENST00000321949 2501 ntAPPRIS P3 TSL 1 (best) BASIC16.25■□□□□ 0.19
SEC61A1P61619 NOS3-210ENST00000484524 2537 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
SEC61A1P61619 ITGA8-201ENST00000378076 6755 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
SEC61A1P61619 WISP2-201ENST00000190983 1403 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
SEC61A1P61619 NOTCH3-201ENST00000263388 8666 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
SEC61A1P61619 SNAP91-201ENST00000195649 4434 ntAPPRIS ALT2 TSL 5 BASIC16.25■□□□□ 0.19
SEC61A1P61619 SNAP91-204ENST00000369694 4449 ntAPPRIS P2 TSL 5 BASIC16.25■□□□□ 0.19
SEC61A1P61619 TSPAN17-201ENST00000298564 2810 ntTSL 2 BASIC16.25■□□□□ 0.19
SEC61A1P61619 ADAM15-207ENST00000368413 1901 ntTSL 5 BASIC16.25■□□□□ 0.19
SEC61A1P61619 SETD7-202ENST00000404104 1590 ntTSL 2 BASIC16.25■□□□□ 0.19
SEC61A1P61619 ATPAF2-206ENST00000474627 1564 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
SEC61A1P61619 CSF1-203ENST00000369801 1364 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
SEC61A1P61619 NOMO3-201ENST00000263012 3911 ntAPPRIS ALT2 TSL 1 (best) BASIC16.25■□□□□ 0.19
SEC61A1P61619 KANSL1L-201ENST00000281772 4754 ntAPPRIS P1 TSL 5 BASIC16.25■□□□□ 0.19
SEC61A1P61619 PHKA1-201ENST00000339490 6121 ntAPPRIS ALT1 TSL 1 (best) BASIC16.25■□□□□ 0.19
SEC61A1P61619 GCOM1-201ENST00000380568 1516 ntAPPRIS ALT2 TSL 2 BASIC16.24■□□□□ 0.19
SEC61A1P61619 TRIM50-201ENST00000333149 2047 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
SEC61A1P61619 SIGLEC14-201ENST00000360844 2035 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
SEC61A1P61619 AUP1-201ENST00000377526 1695 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
SEC61A1P61619 SLC2A5-201ENST00000377414 2344 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
SEC61A1P61619 TMEM91-209ENST00000539627 1843 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
SEC61A1P61619 CENPH-206ENST00000515001 1305 ntTSL 2 BASIC16.24■□□□□ 0.19
SEC61A1P61619 CHRFAM7A-202ENST00000397827 2794 ntTSL 5 BASIC16.24■□□□□ 0.19
SEC61A1P61619 CYR61-201ENST00000451137 2290 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
SEC61A1P61619 ZNF500-202ENST00000545009 2440 ntTSL 2 BASIC16.24■□□□□ 0.19
SEC61A1P61619 CXADR-201ENST00000284878 6254 ntAPPRIS P3 TSL 1 (best) BASIC16.24■□□□□ 0.19
Retrieved 100 of 98,524 protein–RNA pairs in 35.5 ms