Protein–RNA interactions for Protein: P61221

ABCE1, ATP-binding cassette sub-family E member 1, humanhuman

Known RBP Predictions only

Length 599 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ABCE1P61221 TXNL4A-203ENST00000585474 1185 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
ABCE1P61221 CCDC124-203ENST00000597436 1055 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
ABCE1P61221 TIMM50-213ENST00000599794 786 ntTSL 2 BASIC18.32■□□□□ 0.52
ABCE1P61221 AC013268.1-201ENST00000639717 1208 ntTSL 5 BASIC18.32■□□□□ 0.52
ABCE1P61221 CRTC1-201ENST00000321949 2501 ntAPPRIS P3 TSL 1 (best) BASIC18.32■□□□□ 0.52
ABCE1P61221 ZBTB16-201ENST00000335953 2523 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
ABCE1P61221 FLYWCH1P1-201ENST00000460917 1874 ntBASIC18.32■□□□□ 0.52
ABCE1P61221 ASXL1-202ENST00000375687 7031 ntAPPRIS P2 TSL 5 BASIC18.32■□□□□ 0.52
ABCE1P61221 LINC00896-202ENST00000609602 2128 ntBASIC18.32■□□□□ 0.52
ABCE1P61221 DDX31-201ENST00000310532 2408 ntTSL 2 BASIC18.32■□□□□ 0.52
ABCE1P61221 DVL2-201ENST00000005340 3018 ntAPPRIS P2 TSL 1 (best) BASIC18.32■□□□□ 0.52
ABCE1P61221 SPAST-202ENST00000345662 5116 ntAPPRIS ALT1 TSL 1 (best) BASIC18.32■□□□□ 0.52
ABCE1P61221 PRODH-205ENST00000420436 2034 ntAPPRIS ALT2 TSL 2 BASIC18.32■□□□□ 0.52
ABCE1P61221 ZNF22-201ENST00000298299 2551 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
ABCE1P61221 KRT8P11-201ENST00000409686 1436 ntBASIC18.32■□□□□ 0.52
ABCE1P61221 FARP1-242ENST00000627049 5103 ntTSL 5 BASIC18.32■□□□□ 0.52
ABCE1P61221 FNBP1-201ENST00000355681 1977 ntTSL 2 BASIC18.31■□□□□ 0.52
ABCE1P61221 FAM53A-207ENST00000489363 2776 ntTSL 2 BASIC18.31■□□□□ 0.52
ABCE1P61221 DIAPH2-205ENST00000373061 4983 ntAPPRIS ALT2 TSL 5 BASIC18.31■□□□□ 0.52
ABCE1P61221 USP39-201ENST00000323701 2177 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
ABCE1P61221 FHL1-205ENST00000370690 2441 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
ABCE1P61221 USP18-201ENST00000215794 2129 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
ABCE1P61221 PRAF2-202ENST00000553851 1334 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
ABCE1P61221 AL355987.4-201ENST00000415992 4244 ntTSL 2 BASIC18.31■□□□□ 0.52
ABCE1P61221 ACAA1-209ENST00000450296 1570 ntTSL 5 BASIC18.31■□□□□ 0.52
ABCE1P61221 AC138028.4-201ENST00000564984 1845 ntBASIC18.31■□□□□ 0.52
ABCE1P61221 SMPD3-211ENST00000568373 2073 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
ABCE1P61221 CFC1-201ENST00000259216 1046 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
ABCE1P61221 CFC1B-201ENST00000281882 1071 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
ABCE1P61221 XBP1-202ENST00000344347 1131 ntTSL 5 BASIC18.31■□□□□ 0.52
ABCE1P61221 CD47-202ENST00000361309 1285 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
ABCE1P61221 RTL8A-201ENST00000370775 1244 ntAPPRIS P1 BASIC18.31■□□□□ 0.52
ABCE1P61221 GPSM1-203ENST00000392944 1111 ntTSL 3 BASIC18.31■□□□□ 0.52
ABCE1P61221 SLC25A6P5-201ENST00000435663 894 ntBASIC18.31■□□□□ 0.52
ABCE1P61221 GLI3-203ENST00000437480 451 ntTSL 2 BASIC18.31■□□□□ 0.52
ABCE1P61221 PACRGL-206ENST00000502374 1034 ntTSL 2 BASIC18.31■□□□□ 0.52
ABCE1P61221 INO80E-214ENST00000620599 515 ntTSL 2 BASIC18.31■□□□□ 0.52
ABCE1P61221 KRT81-202ENST00000615839 1505 ntAPPRIS ALT2 TSL 5 BASIC18.31■□□□□ 0.52
ABCE1P61221 IL6R-202ENST00000368485 5914 ntAPPRIS P4 TSL 1 (best) BASIC18.31■□□□□ 0.52
ABCE1P61221 WDR25-202ENST00000402312 1969 ntAPPRIS P1 TSL 2 BASIC18.31■□□□□ 0.52
ABCE1P61221 ATPAF1-214ENST00000576409 4158 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
ABCE1P61221 C9orf66-201ENST00000382387 2918 ntAPPRIS P1 BASIC18.31■□□□□ 0.52
ABCE1P61221 MOAP1-201ENST00000298894 2441 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
ABCE1P61221 PABPC1L-217ENST00000537323 1910 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
ABCE1P61221 SCYL1-202ENST00000279270 1659 ntTSL 5 BASIC18.31■□□□□ 0.52
ABCE1P61221 SLC2A14-214ENST00000542505 1650 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
ABCE1P61221 KRT8P3-201ENST00000519669 1449 ntBASIC18.31■□□□□ 0.52
ABCE1P61221 ZNF280D-205ENST00000559000 4726 ntAPPRIS ALT2 TSL 2 BASIC18.31■□□□□ 0.52
ABCE1P61221 RUVBL1-202ENST00000464873 2126 ntTSL 2 BASIC18.31■□□□□ 0.52
ABCE1P61221 ISG20-201ENST00000306072 1856 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
ABCE1P61221 ZNF416-201ENST00000196489 2561 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
ABCE1P61221 GPSM2-201ENST00000264126 3032 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
ABCE1P61221 CNOT6-202ENST00000393356 6303 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
ABCE1P61221 MSANTD1-201ENST00000438480 2922 ntAPPRIS P3 TSL 5 BASIC18.3■□□□□ 0.52
ABCE1P61221 PIK3R2-201ENST00000222254 4033 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
ABCE1P61221 SKOR1-204ENST00000554240 3597 ntAPPRIS ALT2 TSL 5 BASIC18.3■□□□□ 0.52
ABCE1P61221 SPPL2C-201ENST00000329196 2238 ntAPPRIS P1 BASIC18.3■□□□□ 0.52
ABCE1P61221 ZNF133-211ENST00000538547 2245 ntTSL 2 BASIC18.3■□□□□ 0.52
ABCE1P61221 HEXIM2-201ENST00000307275 1528 ntAPPRIS P1 TSL 2 BASIC18.3■□□□□ 0.52
ABCE1P61221 MUS81-215ENST00000533035 2180 ntTSL 5 BASIC18.3■□□□□ 0.52
ABCE1P61221 AHRR-209ENST00000512529 1912 ntTSL 5 BASIC18.3■□□□□ 0.52
ABCE1P61221 TMC6-202ENST00000322914 2786 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
ABCE1P61221 PMF1-BGLAP-202ENST00000368276 852 ntTSL 3 BASIC18.3■□□□□ 0.52
ABCE1P61221 DGCR6L-202ENST00000405465 962 ntTSL 3 BASIC18.3■□□□□ 0.52
ABCE1P61221 TRA2A-211ENST00000538367 2142 ntAPPRIS ALT2 TSL 2 BASIC18.3■□□□□ 0.52
ABCE1P61221 AL138781.1-201ENST00000566567 1274 ntBASIC18.3■□□□□ 0.52
ABCE1P61221 CAPNS1-205ENST00000588780 1035 ntAPPRIS ALT2 TSL 5 BASIC18.3■□□□□ 0.52
ABCE1P61221 LINC00654-202ENST00000589201 579 ntTSL 3 BASIC18.3■□□□□ 0.52
ABCE1P61221 AL158152.2-201ENST00000602703 235 ntTSL 3 BASIC18.3■□□□□ 0.52
ABCE1P61221 TRAPPC3-208ENST00000616074 1114 ntTSL 5 BASIC18.3■□□□□ 0.52
ABCE1P61221 AL160396.2-202ENST00000636692 566 ntAPPRIS ALT2 TSL 5 BASIC18.3■□□□□ 0.52
ABCE1P61221 UBAP1-203ENST00000379186 2524 ntTSL 5 BASIC18.3■□□□□ 0.52
ABCE1P61221 PIGZ-202ENST00000412723 2701 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
ABCE1P61221 FAM131A-204ENST00000418281 1664 ntTSL 5 BASIC18.3■□□□□ 0.52
ABCE1P61221 PHF12-205ENST00000577226 7679 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
ABCE1P61221 TM2D2-201ENST00000397070 1631 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
ABCE1P61221 TMEM91-210ENST00000542945 1610 ntTSL 2 BASIC18.3■□□□□ 0.52
ABCE1P61221 F11R-202ENST00000368026 4835 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
ABCE1P61221 CSAD-209ENST00000453446 1774 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
ABCE1P61221 ISM2-207ENST00000493585 1739 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
ABCE1P61221 SCARB2-201ENST00000264896 4792 ntAPPRIS P2 TSL 1 (best) BASIC18.29■□□□□ 0.52
ABCE1P61221 HSD11B1L-221ENST00000583928 1319 ntTSL 5 BASIC18.29■□□□□ 0.52
ABCE1P61221 SCFD2-204ENST00000611795 1320 ntTSL 5 BASIC18.29■□□□□ 0.52
ABCE1P61221 THEG-201ENST00000342640 1877 ntAPPRIS P4 TSL 1 (best) BASIC18.29■□□□□ 0.52
ABCE1P61221 CACNA1A-201ENST00000360228 8627 ntAPPRIS P4 TSL 1 (best) BASIC18.29■□□□□ 0.52
ABCE1P61221 RGS20-203ENST00000344277 1667 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
ABCE1P61221 MXRA8-202ENST00000342753 2231 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
ABCE1P61221 CCDC92-201ENST00000238156 2787 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
ABCE1P61221 CCT7-215ENST00000539919 2031 ntTSL 2 BASIC18.29■□□□□ 0.52
ABCE1P61221 HEG1-201ENST00000311127 9156 ntAPPRIS P1 TSL 5 BASIC18.29■□□□□ 0.52
ABCE1P61221 NIPAL2-201ENST00000341166 4581 ntTSL 2 BASIC18.29■□□□□ 0.52
ABCE1P61221 HOXB8-201ENST00000239144 1823 ntAPPRIS P2 TSL 2 BASIC18.29■□□□□ 0.52
ABCE1P61221 PHYHD1-207ENST00000421063 1182 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
ABCE1P61221 MAP2K4P1-201ENST00000438453 1195 ntBASIC18.29■□□□□ 0.52
ABCE1P61221 STPG4-207ENST00000445927 891 ntAPPRIS P1 TSL 5 BASIC18.29■□□□□ 0.52
ABCE1P61221 AC108693.2-201ENST00000492981 303 ntTSL 3 BASIC18.29■□□□□ 0.52
ABCE1P61221 UNC93B6-201ENST00000525262 1143 ntTSL 5 BASIC18.29■□□□□ 0.52
ABCE1P61221 ELAC1-203ENST00000588577 694 ntTSL 2 BASIC18.29■□□□□ 0.52
ABCE1P61221 DEDD2-205ENST00000596251 1183 ntAPPRIS P3 TSL 1 (best) BASIC18.29■□□□□ 0.52
ABCE1P61221 PTPDC1-202ENST00000375360 4517 ntAPPRIS ALT2 TSL 1 (best) BASIC18.29■□□□□ 0.52
Retrieved 100 of 98,524 protein–RNA pairs in 42.7 ms