Protein–RNA interactions for Protein: P49459

UBE2A, Ubiquitin-conjugating enzyme E2 A, humanhuman

Predictions only

Length 152 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2AP49459 ILKAP-201ENST00000254654 1490 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
UBE2AP49459 NXNL2-202ENST00000375855 1457 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
UBE2AP49459 TSPAN4-204ENST00000397404 1462 ntAPPRIS P1 TSL 5 BASIC11.8□□□□□ -0.52
UBE2AP49459 ACY1-201ENST00000404366 1473 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
UBE2AP49459 TMEM230-206ENST00000379283 1660 ntAPPRIS P1 TSL 3 BASIC11.8□□□□□ -0.52
UBE2AP49459 HNRNPLL-206ENST00000410076 1687 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
UBE2AP49459 CEBPG-201ENST00000284000 4109 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
UBE2AP49459 SCARF1-202ENST00000348987 2619 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
UBE2AP49459 ABCC6-209ENST00000640696 1893 ntTSL 5 BASIC11.8□□□□□ -0.52
UBE2AP49459 AL049812.1-201ENST00000432563 2267 ntBASIC11.8□□□□□ -0.52
UBE2AP49459 AL390860.1-201ENST00000449298 1541 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
UBE2AP49459 USP39-202ENST00000409025 1946 ntTSL 5 BASIC11.8□□□□□ -0.52
UBE2AP49459 C16orf59-210ENST00000569496 1911 ntAPPRIS ALT2 TSL 5 BASIC11.8□□□□□ -0.52
UBE2AP49459 GRIN3B-201ENST00000234389 3281 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
UBE2AP49459 TCTA-201ENST00000273590 2146 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
UBE2AP49459 IFRD2-202ENST00000417626 2109 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
UBE2AP49459 SEMA7A-203ENST00000543145 2304 ntTSL 2 BASIC11.8□□□□□ -0.52
UBE2AP49459 GPRC5C-205ENST00000481232 1592 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
UBE2AP49459 ZNF134-201ENST00000396161 4914 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
UBE2AP49459 AC020916.1-201ENST00000587762 1774 ntBASIC11.79□□□□□ -0.52
UBE2AP49459 FOXJ2-201ENST00000162391 5523 ntAPPRIS P2 TSL 1 (best) BASIC11.79□□□□□ -0.52
UBE2AP49459 ST3GAL3-206ENST00000351035 2377 ntTSL 5 BASIC11.79□□□□□ -0.52
UBE2AP49459 UNC5D-204ENST00000420357 2966 ntTSL 5 BASIC11.79□□□□□ -0.52
UBE2AP49459 MAPT-204ENST00000344290 6816 ntAPPRIS ALT2 TSL 1 (best) BASIC11.79□□□□□ -0.52
UBE2AP49459 ZIC5-201ENST00000267294 4639 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
UBE2AP49459 TDRKH-203ENST00000368824 2824 ntAPPRIS P2 TSL 1 (best) BASIC11.79□□□□□ -0.52
UBE2AP49459 ECHDC1-214ENST00000474289 2443 ntAPPRIS P3 TSL 5 BASIC11.79□□□□□ -0.52
UBE2AP49459 ANKMY1-209ENST00000405523 1827 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
UBE2AP49459 UBQLN4P1-201ENST00000461599 1801 ntBASIC11.79□□□□□ -0.52
UBE2AP49459 SIRT1-201ENST00000212015 4094 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
UBE2AP49459 NUDT16-203ENST00000537561 5943 ntTSL 5 BASIC11.79□□□□□ -0.52
UBE2AP49459 TC2N-201ENST00000340892 4708 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
UBE2AP49459 SPAG9-222ENST00000618113 8246 ntAPPRIS ALT1 TSL 5 BASIC11.79□□□□□ -0.52
UBE2AP49459 LAMP1-201ENST00000332556 2699 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
UBE2AP49459 KCNB1-203ENST00000635465 4114 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
UBE2AP49459 NBPF9-207ENST00000615421 5835 ntAPPRIS P2 TSL 5 BASIC11.79□□□□□ -0.52
UBE2AP49459 MLST8-232ENST00000569417 1870 ntAPPRIS P3 TSL 1 (best) BASIC11.79□□□□□ -0.52
UBE2AP49459 KMT2E-201ENST00000257745 6714 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
UBE2AP49459 IL6R-208ENST00000622330 1496 ntAPPRIS ALT2 TSL 1 (best) BASIC11.79□□□□□ -0.52
UBE2AP49459 PTPRO-202ENST00000348962 5061 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
UBE2AP49459 RFTN1-201ENST00000334133 2982 ntAPPRIS P2 TSL 1 (best) BASIC11.79□□□□□ -0.52
UBE2AP49459 Z98884.1-201ENST00000451646 830 ntTSL 3 BASIC11.79□□□□□ -0.52
UBE2AP49459 KCNMA1-220ENST00000481070 896 ntTSL 2 BASIC11.79□□□□□ -0.52
UBE2AP49459 CRIP2-202ENST00000483017 1176 ntTSL 2 BASIC11.79□□□□□ -0.52
UBE2AP49459 AC022167.3-201ENST00000564485 427 ntTSL 2 BASIC11.79□□□□□ -0.52
UBE2AP49459 LRRC75A-AS1-225ENST00000581913 1091 ntTSL 2 BASIC11.79□□□□□ -0.52
UBE2AP49459 AC131212.4-201ENST00000623606 975 ntBASIC11.79□□□□□ -0.52
UBE2AP49459 AC073648.6-201ENST00000641589 218 ntBASIC11.79□□□□□ -0.52
UBE2AP49459 WNK1-203ENST00000447667 1902 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
UBE2AP49459 RRS1-201ENST00000320270 1706 ntAPPRIS P1 BASIC11.79□□□□□ -0.52
UBE2AP49459 GABRD-205ENST00000638771 1707 ntAPPRIS ALT2 TSL 3 BASIC11.79□□□□□ -0.52
UBE2AP49459 VARS-215ENST00000375663 4312 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
UBE2AP49459 MPP6-201ENST00000222644 8452 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
UBE2AP49459 CCDC106-201ENST00000308964 1546 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
UBE2AP49459 NOP14-AS1-202ENST00000505731 1999 ntTSL 2 BASIC11.79□□□□□ -0.52
UBE2AP49459 SIX5-203ENST00000560168 1975 ntTSL 4 BASIC11.79□□□□□ -0.52
UBE2AP49459 NRN1-204ENST00000622188 1795 ntTSL 2 BASIC11.79□□□□□ -0.52
UBE2AP49459 PGAP3-206ENST00000579146 2220 ntTSL 2 BASIC11.79□□□□□ -0.52
UBE2AP49459 UBE3A-207ENST00000614096 8741 ntAPPRIS ALT1 TSL 1 (best) BASIC11.79□□□□□ -0.52
UBE2AP49459 HGFAC-204ENST00000511533 2016 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
UBE2AP49459 TMEM19-201ENST00000266673 5656 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
UBE2AP49459 KDM5C-205ENST00000404049 5677 ntAPPRIS ALT2 TSL 1 (best) BASIC11.79□□□□□ -0.52
UBE2AP49459 SOCS3-201ENST00000330871 2734 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
UBE2AP49459 SOX15-201ENST00000250055 1396 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
UBE2AP49459 SPEG-201ENST00000312358 10782 ntAPPRIS P1 TSL 5 BASIC11.79□□□□□ -0.52
UBE2AP49459 SNX11-203ENST00000452859 1601 ntTSL 2 BASIC11.78□□□□□ -0.52
UBE2AP49459 RPH3A-203ENST00000543106 2581 ntAPPRIS ALT2 TSL 2 BASIC11.78□□□□□ -0.52
UBE2AP49459 PCDH17-201ENST00000377918 8232 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
UBE2AP49459 TMEM250-201ENST00000418388 2823 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
UBE2AP49459 IQCJ-SCHIP1-207ENST00000638749 2633 ntAPPRIS P3 TSL 1 (best) BASIC11.78□□□□□ -0.52
UBE2AP49459 CTSH-201ENST00000220166 2190 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
UBE2AP49459 RNF168-201ENST00000318037 5347 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
UBE2AP49459 SLC27A3-204ENST00000368661 2410 ntAPPRIS P2 TSL 1 (best) BASIC11.78□□□□□ -0.52
UBE2AP49459 KRT8-217ENST00000619952 2437 ntTSL 2 BASIC11.78□□□□□ -0.52
UBE2AP49459 GRK6-201ENST00000355472 2939 ntAPPRIS P3 TSL 1 (best) BASIC11.78□□□□□ -0.52
UBE2AP49459 TSC22D4-202ENST00000393991 1469 ntTSL 2 BASIC11.78□□□□□ -0.52
UBE2AP49459 FEM1AP3-201ENST00000403722 1741 ntBASIC11.78□□□□□ -0.52
UBE2AP49459 SYBU-232ENST00000533171 2498 ntAPPRIS ALT2 TSL 2 BASIC11.78□□□□□ -0.52
UBE2AP49459 SPRED1-201ENST00000299084 7780 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
UBE2AP49459 LMAN1-201ENST00000251047 5521 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
UBE2AP49459 NBPF15-202ENST00000488031 4535 ntAPPRIS P1 TSL 5 BASIC11.78□□□□□ -0.52
UBE2AP49459 DUSP1-201ENST00000239223 2019 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
UBE2AP49459 TH-202ENST00000333684 1535 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
UBE2AP49459 MAL-201ENST00000309988 1112 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
UBE2AP49459 C15orf48-201ENST00000344300 875 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
UBE2AP49459 NDUFA8-201ENST00000373768 844 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
UBE2AP49459 ISG20-202ENST00000379224 540 ntTSL 3 BASIC11.78□□□□□ -0.52
UBE2AP49459 TRA2B-203ENST00000382191 976 ntTSL 2 BASIC11.78□□□□□ -0.52
UBE2AP49459 AC110769.1-201ENST00000420161 815 ntTSL 3 BASIC11.78□□□□□ -0.52
UBE2AP49459 AL353807.1-201ENST00000427475 662 ntBASIC11.78□□□□□ -0.52
UBE2AP49459 AMN1-211ENST00000541931 880 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
UBE2AP49459 AC009052.1-201ENST00000567090 298 ntTSL 3 BASIC11.78□□□□□ -0.52
UBE2AP49459 NDUFV2-AS1-201ENST00000582375 770 ntTSL 2 BASIC11.78□□□□□ -0.52
UBE2AP49459 AL158152.2-201ENST00000602703 235 ntTSL 3 BASIC11.78□□□□□ -0.52
UBE2AP49459 AC124016.1-201ENST00000609552 612 ntBASIC11.78□□□□□ -0.52
UBE2AP49459 JADE2-211ENST00000612830 1251 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
UBE2AP49459 AC018445.1-201ENST00000621571 568 ntTSL 4 BASIC11.78□□□□□ -0.52
UBE2AP49459 CD24-208ENST00000622315 825 ntAPPRIS ALT2 TSL 2 BASIC11.78□□□□□ -0.52
UBE2AP49459 SNN-201ENST00000329565 3312 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
UBE2AP49459 CARD9-202ENST00000371734 1814 ntTSL 5 BASIC11.78□□□□□ -0.52
Retrieved 100 of 98,524 protein–RNA pairs in 26 ms