Protein–RNA interactions for Protein: P42898

MTHFR, Methylenetetrahydrofolate reductase, humanhuman

Predictions only

Length 656 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MTHFRP42898 PPTC7-201ENST00000354300 4996 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
MTHFRP42898 PDLIM2-206ENST00000409141 1463 ntTSL 2 BASIC19.42■□□□□ 0.7
MTHFRP42898 KATNBL1P6-202ENST00000562413 1466 ntBASIC19.42■□□□□ 0.7
MTHFRP42898 INSM2-201ENST00000307169 3013 ntAPPRIS P1 BASIC19.42■□□□□ 0.7
MTHFRP42898 AC112907.3-201ENST00000577781 2400 ntBASIC19.42■□□□□ 0.7
MTHFRP42898 KCNQ5-207ENST00000403813 6539 ntAPPRIS ALT2 TSL 5 BASIC19.42■□□□□ 0.7
MTHFRP42898 ACTL6A-201ENST00000392662 1899 ntTSL 2 BASIC19.42■□□□□ 0.7
MTHFRP42898 PCDH8-202ENST00000377942 5088 ntAPPRIS P4 TSL 1 (best) BASIC19.42■□□□□ 0.7
MTHFRP42898 RSPH14-201ENST00000216036 1291 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
MTHFRP42898 RNASEH2A-201ENST00000221486 1165 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
MTHFRP42898 RWDD3-202ENST00000370202 1235 ntAPPRIS P1 TSL 3 BASIC19.42■□□□□ 0.7
MTHFRP42898 ROMO1-204ENST00000374078 498 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
MTHFRP42898 MPIG6B-202ENST00000375805 668 ntAPPRIS ALT2 TSL 1 (best) BASIC19.42■□□□□ 0.7
MTHFRP42898 PMEPA1-204ENST00000395814 800 ntTSL 3 BASIC19.42■□□□□ 0.7
MTHFRP42898 SLC9A3R1-202ENST00000413388 1285 ntTSL 2 BASIC19.42■□□□□ 0.7
MTHFRP42898 ELP6-205ENST00000439305 880 ntTSL 2 BASIC19.42■□□□□ 0.7
MTHFRP42898 AC243965.1-201ENST00000557595 781 ntTSL 3 BASIC19.42■□□□□ 0.7
MTHFRP42898 CTDNEP1-207ENST00000572043 857 ntTSL 3 BASIC19.42■□□□□ 0.7
MTHFRP42898 FAM220A-205ENST00000578372 207 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
MTHFRP42898 MCRIP2-211ENST00000629534 341 ntTSL 2 BASIC19.42■□□□□ 0.7
MTHFRP42898 NGEF-202ENST00000373552 2286 ntAPPRIS P1 TSL 2 BASIC19.42■□□□□ 0.7
MTHFRP42898 AL365232.1-201ENST00000423730 1636 ntAPPRIS P1 TSL 5 BASIC19.42■□□□□ 0.7
MTHFRP42898 WDR18-202ENST00000585809 1608 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
MTHFRP42898 AC008556.1-201ENST00000610908 2040 ntBASIC19.42■□□□□ 0.7
MTHFRP42898 KCNK4-207ENST00000539216 1723 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
MTHFRP42898 TUBA4A-202ENST00000392088 2499 ntTSL 2 BASIC19.42■□□□□ 0.7
MTHFRP42898 SCRN2-202ENST00000407215 1779 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
MTHFRP42898 HCN1-202ENST00000634658 4738 ntTSL 3 BASIC19.42■□□□□ 0.7
MTHFRP42898 SET-201ENST00000322030 2915 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
MTHFRP42898 CXCL16-201ENST00000293778 2222 ntAPPRIS P2 TSL 1 (best) BASIC19.41■□□□□ 0.7
MTHFRP42898 PARP2-202ENST00000429687 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC19.41■□□□□ 0.7
MTHFRP42898 MFSD1-201ENST00000264266 1594 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
MTHFRP42898 SLC39A5-209ENST00000454355 1968 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
MTHFRP42898 HAUS4-218ENST00000555986 1626 ntTSL 5 BASIC19.41■□□□□ 0.7
MTHFRP42898 SOX11-201ENST00000322002 8719 ntAPPRIS P1 BASIC19.41■□□□□ 0.7
MTHFRP42898 NRXN1-226ENST00000626899 2543 ntTSL 2 BASIC19.41■□□□□ 0.7
MTHFRP42898 SNRPA1-201ENST00000254193 1055 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
MTHFRP42898 MIR202HG-201ENST00000300167 384 ntTSL 2 BASIC19.41■□□□□ 0.7
MTHFRP42898 STX8-201ENST00000306357 1246 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
MTHFRP42898 MIR564-202ENST00000385049 94 ntBASIC19.41■□□□□ 0.7
MTHFRP42898 BID-204ENST00000399767 2129 ntTSL 2 BASIC19.41■□□□□ 0.7
MTHFRP42898 NDUFB9-204ENST00000518008 789 ntTSL 2 BASIC19.41■□□□□ 0.7
MTHFRP42898 ATP5G2-204ENST00000549164 745 ntAPPRIS P1 TSL 3 BASIC19.41■□□□□ 0.7
MTHFRP42898 ANAPC11-204ENST00000571024 668 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
MTHFRP42898 AP001005.1-201ENST00000571755 1248 ntBASIC19.41■□□□□ 0.7
MTHFRP42898 ANAPC11-218ENST00000582222 523 ntTSL 2 BASIC19.41■□□□□ 0.7
MTHFRP42898 ATP5G2-209ENST00000602871 668 ntAPPRIS P1 TSL 2 BASIC19.41■□□□□ 0.7
MTHFRP42898 CCNC-219ENST00000627680 896 ntTSL 5 BASIC19.41■□□□□ 0.7
MTHFRP42898 FGFR1-238ENST00000532791 5590 ntAPPRIS ALT1 TSL 5 BASIC19.41■□□□□ 0.7
MTHFRP42898 HDHD5-201ENST00000155674 1735 ntAPPRIS P3 TSL 1 (best) BASIC19.41■□□□□ 0.7
MTHFRP42898 MFSD10-202ENST00000355443 1753 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
MTHFRP42898 TMEM189-201ENST00000371650 2222 ntAPPRIS ALT1 TSL 1 (best) BASIC19.41■□□□□ 0.7
MTHFRP42898 NOL3-201ENST00000268605 1394 ntAPPRIS P3 TSL 3 BASIC19.41■□□□□ 0.7
MTHFRP42898 NKX2-1-202ENST00000498187 2338 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
MTHFRP42898 KLHL11-201ENST00000319121 2383 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
MTHFRP42898 POMC-204ENST00000405623 1426 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
MTHFRP42898 SSX2IP-210ENST00000605755 1933 ntTSL 2 BASIC19.41■□□□□ 0.7
MTHFRP42898 TRMT2A-201ENST00000252136 2964 ntAPPRIS P3 TSL 1 (best) BASIC19.41■□□□□ 0.7
MTHFRP42898 SSH3-202ENST00000308298 2046 ntTSL 2 BASIC19.41■□□□□ 0.7
MTHFRP42898 PDLIM5-205ENST00000380180 2020 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
MTHFRP42898 AC008105.1-201ENST00000587534 2003 ntTSL 2 BASIC19.41■□□□□ 0.7
MTHFRP42898 NSUN5P1-202ENST00000421140 1535 ntBASIC19.41■□□□□ 0.7
MTHFRP42898 NSUN5P2-203ENST00000457352 1529 ntBASIC19.41■□□□□ 0.7
MTHFRP42898 C17orf58-204ENST00000580729 2065 ntTSL 5 BASIC19.4■□□□□ 0.7
MTHFRP42898 MTX1-202ENST00000368376 1632 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
MTHFRP42898 AP003356.1-202ENST00000517910 2770 ntTSL 2 BASIC19.4■□□□□ 0.7
MTHFRP42898 RTN4RL2-201ENST00000335099 2203 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
MTHFRP42898 CDK4-202ENST00000312990 1650 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
MTHFRP42898 ISLR2-204ENST00000453268 2812 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
MTHFRP42898 MSANTD1-203ENST00000507492 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC19.4■□□□□ 0.7
MTHFRP42898 FAM189B-201ENST00000350210 2379 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
MTHFRP42898 SSH1-209ENST00000551165 2354 ntAPPRIS ALT2 TSL 1 (best) BASIC19.4■□□□□ 0.7
MTHFRP42898 PRR16-201ENST00000379551 1826 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
MTHFRP42898 CRMP1-201ENST00000324989 3146 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
MTHFRP42898 SPIN2B-202ENST00000333933 1258 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
MTHFRP42898 PRSS38-201ENST00000366757 1267 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
MTHFRP42898 UBXN10-AS1-201ENST00000442226 510 ntTSL 2 BASIC19.4■□□□□ 0.7
MTHFRP42898 RN7SL606P-201ENST00000472779 293 ntBASIC19.4■□□□□ 0.7
MTHFRP42898 BET1L-206ENST00000486280 665 ntTSL 3 BASIC19.4■□□□□ 0.7
MTHFRP42898 AC034213.1-201ENST00000507681 806 ntTSL 3 BASIC19.4■□□□□ 0.7
MTHFRP42898 C12orf76-202ENST00000546627 461 ntTSL 4 BASIC19.4■□□□□ 0.7
MTHFRP42898 SYNGR4-204ENST00000601610 859 ntTSL 3 BASIC19.4■□□□□ 0.7
MTHFRP42898 AC024563.2-201ENST00000603282 481 ntBASIC19.4■□□□□ 0.7
MTHFRP42898 AC139530.3-201ENST00000620344 690 ntBASIC19.4■□□□□ 0.7
MTHFRP42898 NME4-212ENST00000621774 904 ntTSL 3 BASIC19.4■□□□□ 0.7
MTHFRP42898 SDF4-201ENST00000263741 2079 ntAPPRIS P3 TSL 1 (best) BASIC19.4■□□□□ 0.7
MTHFRP42898 RSRC1-211ENST00000480820 1410 ntAPPRIS P1 TSL 5 BASIC19.4■□□□□ 0.7
MTHFRP42898 TRIM13-206ENST00000457662 1489 ntAPPRIS P3 TSL 1 (best) BASIC19.4■□□□□ 0.7
MTHFRP42898 EDNRA-206ENST00000511804 1569 ntTSL 2 BASIC19.4■□□□□ 0.7
MTHFRP42898 TPD52-211ENST00000519303 1594 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
MTHFRP42898 RGS11-204ENST00000397770 2390 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
MTHFRP42898 NEIL3-201ENST00000264596 2408 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
MTHFRP42898 GTPBP3-222ENST00000600625 2493 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
MTHFRP42898 RBM26-207ENST00000622611 5230 ntTSL 2 BASIC19.39■□□□□ 0.7
MTHFRP42898 THTPA-202ENST00000404535 1779 ntAPPRIS P1 TSL 2 BASIC19.39■□□□□ 0.7
MTHFRP42898 MRM3-201ENST00000304478 1809 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.7
MTHFRP42898 NKD2-201ENST00000274150 1940 ntAPPRIS ALT2 TSL 1 (best) BASIC19.39■□□□□ 0.7
MTHFRP42898 BPTF-201ENST00000306378 9688 ntAPPRIS P2 TSL 1 (best) BASIC19.39■□□□□ 0.7
MTHFRP42898 C7orf43-206ENST00000456769 2046 ntTSL 2 BASIC19.39■□□□□ 0.69
MTHFRP42898 SEMA6B-202ENST00000586965 2034 ntAPPRIS ALT2 TSL 1 (best) BASIC19.39■□□□□ 0.69
Retrieved 100 of 98,524 protein–RNA pairs in 53.9 ms