Protein–RNA interactions for Protein: P35716

SOX11, Transcription factor SOX-11, humanhuman

Predictions only

Length 441 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SOX11P35716 PTP4A3-202ENST00000349124 2710 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
SOX11P35716 FAM219B-204ENST00000563119 2721 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
SOX11P35716 APP-202ENST00000348990 3355 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
SOX11P35716 KIAA1522-202ENST00000373480 5294 ntAPPRIS ALT2 TSL 1 (best) BASIC18.17■□□□□ 0.5
SOX11P35716 KIAA1522-203ENST00000373481 5293 ntAPPRIS ALT2 TSL 2 BASIC18.17■□□□□ 0.5
SOX11P35716 LIN28B-AS1-203ENST00000636682 1797 ntTSL 3 BASIC18.17■□□□□ 0.5
SOX11P35716 C21orf91-203ENST00000400559 1593 ntAPPRIS ALT1 TSL 5 BASIC18.17■□□□□ 0.5
SOX11P35716 WDR41-208ENST00000507029 1553 ntTSL 2 BASIC18.17■□□□□ 0.5
SOX11P35716 TUBGCP3-202ENST00000375669 2723 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
SOX11P35716 PAOX-201ENST00000278060 1858 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
SOX11P35716 CHRFAM7A-202ENST00000397827 2794 ntTSL 5 BASIC18.16■□□□□ 0.5
SOX11P35716 ST6GALNAC4-201ENST00000335791 1691 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
SOX11P35716 CD248-201ENST00000311330 2558 ntAPPRIS P1 BASIC18.16■□□□□ 0.5
SOX11P35716 DAG1-201ENST00000308775 5522 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
SOX11P35716 NUMBL-202ENST00000540131 1931 ntAPPRIS ALT2 TSL 2 BASIC18.16■□□□□ 0.5
SOX11P35716 AC079598.2-202ENST00000546624 1451 ntBASIC18.16■□□□□ 0.5
SOX11P35716 PARD3-201ENST00000340077 3518 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
SOX11P35716 WBP2-213ENST00000590221 1745 ntAPPRIS ALT1 TSL 3 BASIC18.16■□□□□ 0.5
SOX11P35716 SLX1A-201ENST00000251303 1091 ntAPPRIS P4 TSL 1 (best) BASIC18.16■□□□□ 0.5
SOX11P35716 SLX1B-201ENST00000330181 1165 ntAPPRIS P4 TSL 1 (best) BASIC18.16■□□□□ 0.5
SOX11P35716 KCNIP3-205ENST00000468529 985 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
SOX11P35716 MFSD4A-206ENST00000489709 1136 ntTSL 5 BASIC18.16■□□□□ 0.5
SOX11P35716 ATP5L2-201ENST00000505920 799 ntAPPRIS P1 BASIC18.16■□□□□ 0.5
SOX11P35716 FAM181A-203ENST00000556222 1162 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
SOX11P35716 SMAD7-207ENST00000589634 1278 ntAPPRIS ALT1 TSL 4 BASIC18.16■□□□□ 0.5
SOX11P35716 AC004816.2-201ENST00000622856 284 ntTSL 5 BASIC18.16■□□□□ 0.5
SOX11P35716 AL512353.2-201ENST00000448759 1962 ntBASIC18.16■□□□□ 0.5
SOX11P35716 ROCK2-209ENST00000616279 6401 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
SOX11P35716 THOC3-208ENST00000513482 1796 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
SOX11P35716 FOXD4L6-201ENST00000622588 2034 ntAPPRIS P1 BASIC18.16■□□□□ 0.5
SOX11P35716 AGAP2-201ENST00000257897 5388 ntAPPRIS P3 TSL 1 (best) BASIC18.16■□□□□ 0.5
SOX11P35716 VKORC1L1-201ENST00000360768 5899 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
SOX11P35716 PSKH2-201ENST00000276616 1322 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
SOX11P35716 TBC1D20-201ENST00000354200 4466 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
SOX11P35716 IRX1P1-201ENST00000438849 1838 ntBASIC18.16■□□□□ 0.5
SOX11P35716 DENND6B-201ENST00000413817 4939 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
SOX11P35716 PTPA-206ENST00000358994 2664 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
SOX11P35716 PARP15-202ENST00000464300 2156 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
SOX11P35716 GTF3C5-201ENST00000342018 1905 ntTSL 5 BASIC18.15■□□□□ 0.5
SOX11P35716 OR6D1P-202ENST00000641007 5290 ntBASIC18.15■□□□□ 0.5
SOX11P35716 STARD3-209ENST00000544210 1666 ntTSL 2 BASIC18.15■□□□□ 0.5
SOX11P35716 PLK3-201ENST00000372201 2492 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
SOX11P35716 ECE1-203ENST00000374893 2484 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
SOX11P35716 L2HGDH-203ENST00000421284 1958 ntAPPRIS P1 TSL 2 BASIC18.15■□□□□ 0.5
SOX11P35716 PHRF1-205ENST00000533464 5218 ntAPPRIS ALT2 TSL 1 (best) BASIC18.15■□□□□ 0.5
SOX11P35716 RXRB-202ENST00000374685 2846 ntAPPRIS ALT1 TSL 1 (best) BASIC18.15■□□□□ 0.5
SOX11P35716 PDZD7-201ENST00000370215 2032 ntTSL 2 BASIC18.15■□□□□ 0.5
SOX11P35716 PAK4-201ENST00000321944 2555 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
SOX11P35716 TRABD-201ENST00000303434 2329 ntAPPRIS P3 TSL 1 (best) BASIC18.15■□□□□ 0.5
SOX11P35716 MEN1-203ENST00000337652 3162 ntAPPRIS P3 TSL 5 BASIC18.15■□□□□ 0.5
SOX11P35716 WNK2-201ENST00000297954 7138 ntAPPRIS P2 TSL 1 (best) BASIC18.15■□□□□ 0.5
SOX11P35716 LINC01586-201ENST00000506090 1840 ntTSL 2 BASIC18.15■□□□□ 0.5
SOX11P35716 GHDC-212ENST00000593209 1827 ntTSL 5 BASIC18.15■□□□□ 0.5
SOX11P35716 CPEB3-203ENST00000614585 5789 ntAPPRIS P3 TSL 5 BASIC18.15■□□□□ 0.5
SOX11P35716 MPC2-201ENST00000271373 798 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
SOX11P35716 RAMP1-204ENST00000409726 734 ntTSL 3 BASIC18.15■□□□□ 0.5
SOX11P35716 KRT18P16-201ENST00000510337 1294 ntBASIC18.15■□□□□ 0.5
SOX11P35716 BAALC-AS1-207ENST00000522856 594 ntTSL 3 BASIC18.15■□□□□ 0.5
SOX11P35716 AC117500.4-201ENST00000542797 617 ntTSL 3 BASIC18.15■□□□□ 0.5
SOX11P35716 AC022509.3-202ENST00000545819 566 ntTSL 3 BASIC18.15■□□□□ 0.5
SOX11P35716 AIPL1-209ENST00000575265 2111 ntAPPRIS ALT2 TSL 1 (best) BASIC18.15■□□□□ 0.5
SOX11P35716 AC011445.1-201ENST00000601911 877 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
SOX11P35716 AC016737.2-201ENST00000609273 358 ntTSL 3 BASIC18.15■□□□□ 0.5
SOX11P35716 PTK6-201ENST00000217185 2401 ntTSL 2 BASIC18.15■□□□□ 0.5
SOX11P35716 BANP-202ENST00000355022 2164 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
SOX11P35716 TRAF3-203ENST00000392745 2459 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
SOX11P35716 FAM69C-201ENST00000343998 3671 ntAPPRIS P1 TSL 5 BASIC18.15■□□□□ 0.5
SOX11P35716 RBPJL-203ENST00000372743 1623 ntAPPRIS ALT1 TSL 1 (best) BASIC18.15■□□□□ 0.5
SOX11P35716 NDRG2-227ENST00000554143 1980 ntAPPRIS ALT1 TSL 2 BASIC18.15■□□□□ 0.5
SOX11P35716 AL031658.1-201ENST00000449519 2013 ntTSL 2 BASIC18.15■□□□□ 0.5
SOX11P35716 GRAMD2B-218ENST00000542322 2977 ntTSL 2 BASIC18.15■□□□□ 0.5
SOX11P35716 WNT6-201ENST00000233948 1703 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
SOX11P35716 ING5-201ENST00000313552 5196 ntAPPRIS P3 TSL 1 (best) BASIC18.15■□□□□ 0.5
SOX11P35716 HLA-G-201ENST00000360323 1427 ntAPPRIS P2 BASIC18.15■□□□□ 0.5
SOX11P35716 AC104417.2-201ENST00000562989 1793 ntBASIC18.14■□□□□ 0.5
SOX11P35716 TFRC-202ENST00000392396 5032 ntAPPRIS P3 TSL 1 (best) BASIC18.14■□□□□ 0.5
SOX11P35716 ART5-203ENST00000397068 1504 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
SOX11P35716 GNA13-201ENST00000439174 4922 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
SOX11P35716 EGFR-202ENST00000342916 2239 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
SOX11P35716 DNAJC28-204ENST00000617313 2237 ntAPPRIS P1 TSL 5 BASIC18.14■□□□□ 0.49
SOX11P35716 GNE-201ENST00000377902 2565 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
SOX11P35716 SLC25A15-201ENST00000338625 1586 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
SOX11P35716 ATPAF2-206ENST00000474627 1564 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
SOX11P35716 SAAL1-202ENST00000524803 1582 ntAPPRIS P2 TSL 1 (best) BASIC18.14■□□□□ 0.49
SOX11P35716 NOL3-204ENST00000564053 1592 ntAPPRIS ALT2 TSL 2 BASIC18.14■□□□□ 0.49
SOX11P35716 NAA60-235ENST00000576916 1567 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
SOX11P35716 HNF1A-202ENST00000400024 2337 ntTSL 2 BASIC18.14■□□□□ 0.49
SOX11P35716 UNC93B2-201ENST00000285383 730 ntBASIC18.14■□□□□ 0.49
SOX11P35716 TMEM223-201ENST00000307366 1288 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
SOX11P35716 NCF1B-202ENST00000432102 930 ntTSL 2 BASIC18.14■□□□□ 0.49
SOX11P35716 KDM2B-217ENST00000543852 1188 ntTSL 5 BASIC18.14■□□□□ 0.49
SOX11P35716 AC090970.2-201ENST00000561318 865 ntTSL 5 BASIC18.14■□□□□ 0.49
SOX11P35716 AP000525.1-201ENST00000608286 694 ntBASIC18.14■□□□□ 0.49
SOX11P35716 KANK3-205ENST00000610351 1191 ntTSL 5 BASIC18.14■□□□□ 0.49
SOX11P35716 AL445675.2-201ENST00000620291 557 ntBASIC18.14■□□□□ 0.49
SOX11P35716 SLC6A6-208ENST00000621751 1252 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
SOX11P35716 HBEGF-201ENST00000230990 2386 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
SOX11P35716 CD7-206ENST00000583376 1659 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
SOX11P35716 TPSB2-203ENST00000612142 1352 ntAPPRIS P5 TSL 1 (best) BASIC18.14■□□□□ 0.49
SOX11P35716 HYOU1-212ENST00000532519 2162 ntTSL 5 BASIC18.14■□□□□ 0.49
Retrieved 100 of 98,524 protein–RNA pairs in 25.3 ms