Protein–RNA interactions for Protein: P29353

SHC1, SHC-transforming protein 1, humanhuman

Predictions only

Length 583 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHC1P29353 CASC2-205ENST00000454781 2216 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
SHC1P29353 RUSC2-202ENST00000455600 5636 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
SHC1P29353 NR2F1-205ENST00000615873 1427 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
SHC1P29353 PODXL2-201ENST00000342480 2186 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
SHC1P29353 PTPA-206ENST00000358994 2664 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
SHC1P29353 CTSB-202ENST00000353047 3875 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
SHC1P29353 RNF121-201ENST00000361756 2625 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
SHC1P29353 GPT-202ENST00000394955 1885 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
SHC1P29353 LINC01568-207ENST00000641790 1380 ntBASIC17.03■□□□□ 0.32
SHC1P29353 SLC9A6-201ENST00000370695 4725 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
SHC1P29353 CUTC-202ENST00000370476 1346 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
SHC1P29353 NOV-201ENST00000259526 2522 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
SHC1P29353 LEFTY2-201ENST00000366820 2287 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
SHC1P29353 TRIP4-201ENST00000261884 2045 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
SHC1P29353 ADORA2A-213ENST00000610595 2736 ntAPPRIS P1 TSL 2 BASIC17.03■□□□□ 0.32
SHC1P29353 PFN2-203ENST00000452853 1780 ntAPPRIS ALT1 TSL 1 (best) BASIC17.03■□□□□ 0.32
SHC1P29353 CD151-201ENST00000322008 1548 ntAPPRIS P2 TSL 1 (best) BASIC17.03■□□□□ 0.32
SHC1P29353 BSG-201ENST00000333511 1974 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
SHC1P29353 TSPY14P-201ENST00000303979 915 ntBASIC17.03■□□□□ 0.32
SHC1P29353 ING1-202ENST00000338450 1189 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
SHC1P29353 MUC1-211ENST00000438413 927 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
SHC1P29353 AC108025.1-201ENST00000453678 1058 ntTSL 5 BASIC17.03■□□□□ 0.32
SHC1P29353 ABHD11-207ENST00000458339 890 ntTSL 3 BASIC17.03■□□□□ 0.32
SHC1P29353 TYROBP-209ENST00000589517 415 ntAPPRIS ALT1 TSL 1 (best) BASIC17.03■□□□□ 0.32
SHC1P29353 MRPL3-201ENST00000264995 1706 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
SHC1P29353 STARD3-201ENST00000336308 2132 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
SHC1P29353 RRN3-205ENST00000563559 2128 ntTSL 5 BASIC17.03■□□□□ 0.32
SHC1P29353 SMARCC2-201ENST00000267064 4076 ntAPPRIS P4 TSL 1 (best) BASIC17.03■□□□□ 0.32
SHC1P29353 SHANK1-202ENST00000359082 6459 ntTSL 5 BASIC17.03■□□□□ 0.32
SHC1P29353 DNM1-211ENST00000627061 2724 ntTSL 5 BASIC17.03■□□□□ 0.32
SHC1P29353 GJA4-201ENST00000342280 1622 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
SHC1P29353 ABHD14B-202ENST00000361143 1636 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
SHC1P29353 TNPO2-203ENST00000450764 4993 ntAPPRIS ALT1 TSL 1 (best) BASIC17.02■□□□□ 0.32
SHC1P29353 AC008878.3-201ENST00000617428 4964 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
SHC1P29353 SERPINH1-212ENST00000530284 1358 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
SHC1P29353 PRODH-215ENST00000610940 2405 ntAPPRIS P3 TSL 1 (best) BASIC17.02■□□□□ 0.32
SHC1P29353 SCRIB-201ENST00000320476 5143 ntAPPRIS ALT2 TSL 1 (best) BASIC17.02■□□□□ 0.32
SHC1P29353 PRR5-201ENST00000006251 1767 ntTSL 2 BASIC17.02■□□□□ 0.32
SHC1P29353 KCNC4-203ENST00000413138 3018 ntAPPRIS ALT2 TSL 5 BASIC17.02■□□□□ 0.32
SHC1P29353 PCGF6-201ENST00000337211 1950 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
SHC1P29353 DCST1-204ENST00000423025 2199 ntAPPRIS ALT2 TSL 2 BASIC17.02■□□□□ 0.32
SHC1P29353 P2RY6-208ENST00000540124 2351 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
SHC1P29353 SLC35A3-217ENST00000639807 2767 ntTSL 5 BASIC17.02■□□□□ 0.32
SHC1P29353 CHRM4-201ENST00000433765 1511 ntAPPRIS P1 BASIC17.02■□□□□ 0.32
SHC1P29353 ZHX3-212ENST00000558993 1528 ntTSL 5 BASIC17.02■□□□□ 0.32
SHC1P29353 FAM124A-202ENST00000322475 4761 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
SHC1P29353 C16orf59-210ENST00000569496 1911 ntAPPRIS ALT2 TSL 5 BASIC17.02■□□□□ 0.32
SHC1P29353 AIPL1-209ENST00000575265 2111 ntAPPRIS ALT2 TSL 1 (best) BASIC17.02■□□□□ 0.32
SHC1P29353 PARS2-201ENST00000371279 2347 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
SHC1P29353 ZNRF2-201ENST00000323037 3460 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
SHC1P29353 PIF1-205ENST00000559239 2677 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
SHC1P29353 TSPAN4-204ENST00000397404 1462 ntAPPRIS P1 TSL 5 BASIC17.02■□□□□ 0.32
SHC1P29353 TRAPPC3-204ENST00000373166 1265 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
SHC1P29353 CRAT-202ENST00000393384 973 ntTSL 2 BASIC17.02■□□□□ 0.32
SHC1P29353 AL445685.1-201ENST00000425802 762 ntTSL 3 BASIC17.02■□□□□ 0.32
SHC1P29353 AC073343.2-202ENST00000430844 532 ntTSL 4 BASIC17.02■□□□□ 0.32
SHC1P29353 ECEL1P2-202ENST00000465689 757 ntBASIC17.02■□□□□ 0.32
SHC1P29353 BNIP3L-204ENST00000520409 739 ntTSL 2 BASIC17.02■□□□□ 0.32
SHC1P29353 EGLN1P1-201ENST00000531623 762 ntBASIC17.02■□□□□ 0.32
SHC1P29353 MIR4674-201ENST00000582457 87 ntBASIC17.02■□□□□ 0.32
SHC1P29353 AC012306.2-201ENST00000609350 630 ntBASIC17.02■□□□□ 0.32
SHC1P29353 PHOSPHO2-206ENST00000616481 1252 ntAPPRIS P1 TSL 3 BASIC17.02■□□□□ 0.32
SHC1P29353 PHOSPHO2-208ENST00000617738 1053 ntAPPRIS P1 TSL 2 BASIC17.02■□□□□ 0.32
SHC1P29353 AC215522.2-202ENST00000633163 1143 ntTSL 5 BASIC17.02■□□□□ 0.32
SHC1P29353 FOXD4L6-201ENST00000622588 2034 ntAPPRIS P1 BASIC17.02■□□□□ 0.32
SHC1P29353 AP5S1-203ENST00000379573 1848 ntTSL 1 (best) BASIC17.02■□□□□ 0.31
SHC1P29353 PLCL2-204ENST00000615277 4147 ntAPPRIS ALT2 TSL 1 (best) BASIC17.02■□□□□ 0.31
SHC1P29353 AC092338.2-201ENST00000568827 1415 ntBASIC17.02■□□□□ 0.31
SHC1P29353 WNT5B-201ENST00000310594 2184 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
SHC1P29353 PDLIM3-202ENST00000284770 1766 ntTSL 1 (best) BASIC17.02■□□□□ 0.31
SHC1P29353 RIN1-205ENST00000530056 2122 ntTSL 2 BASIC17.02■□□□□ 0.31
SHC1P29353 TCTN1-223ENST00000550703 2149 ntTSL 2 BASIC17.02■□□□□ 0.31
SHC1P29353 CDHR1-201ENST00000332904 2694 ntTSL 1 (best) BASIC17.02■□□□□ 0.31
SHC1P29353 CHRNA10-201ENST00000250699 1945 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
SHC1P29353 JAKMIP1-208ENST00000637373 1362 ntTSL 5 BASIC17.02■□□□□ 0.31
SHC1P29353 IFRD2-204ENST00000436390 2275 ntAPPRIS P1 TSL 2 BASIC17.01■□□□□ 0.31
SHC1P29353 PRRT1-202ENST00000375150 1726 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
SHC1P29353 CXorf40A-208ENST00000434353 1524 ntAPPRIS ALT1 TSL 5 BASIC17.01■□□□□ 0.31
SHC1P29353 HR-202ENST00000381418 6336 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
SHC1P29353 RIPK2-201ENST00000220751 2584 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
SHC1P29353 RPRM-201ENST00000325926 1471 ntAPPRIS P1 BASIC17.01■□□□□ 0.31
SHC1P29353 PRDM14-201ENST00000276594 2344 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
SHC1P29353 AP003774.1-201ENST00000316124 2340 ntTSL 2 BASIC17.01■□□□□ 0.31
SHC1P29353 MRPL54-201ENST00000330133 626 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
SHC1P29353 CKS1B-203ENST00000368439 912 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
SHC1P29353 BUB3-202ENST00000368859 667 ntTSL 3 BASIC17.01■□□□□ 0.31
SHC1P29353 TSPY1-201ENST00000423647 1171 ntAPPRIS ALT2 TSL 1 (best) BASIC17.01■□□□□ 0.31
SHC1P29353 ECEL1P3-201ENST00000427961 737 ntBASIC17.01■□□□□ 0.31
SHC1P29353 SLC25A1P2-201ENST00000430693 912 ntBASIC17.01■□□□□ 0.31
SHC1P29353 CA15P1-201ENST00000481698 905 ntBASIC17.01■□□□□ 0.31
SHC1P29353 TXNRD3-203ENST00000524230 2950 ntAPPRIS ALT2 TSL 1 (best) BASIC17.01■□□□□ 0.31
SHC1P29353 AC015712.4-203ENST00000559673 630 ntTSL 3 BASIC17.01■□□□□ 0.31
SHC1P29353 EIF2AK4-209ENST00000560648 687 ntTSL 3 BASIC17.01■□□□□ 0.31
SHC1P29353 AC006942.1-201ENST00000600669 520 ntTSL 2 BASIC17.01■□□□□ 0.31
SHC1P29353 CCDC28A-203ENST00000617445 1240 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
SHC1P29353 KRT8P3-201ENST00000519669 1449 ntBASIC17.01■□□□□ 0.31
SHC1P29353 USP39-202ENST00000409025 1946 ntTSL 5 BASIC17.01■□□□□ 0.31
SHC1P29353 FAM219B-204ENST00000563119 2721 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
SHC1P29353 SNAI3-201ENST00000332281 1732 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
SHC1P29353 CCDC157-201ENST00000338306 3001 ntAPPRIS P3 TSL 5 BASIC17.01■□□□□ 0.31
Retrieved 100 of 98,524 protein–RNA pairs in 35.8 ms