Protein–RNA interactions for Protein: P29350

PTPN6, Tyrosine-protein phosphatase non-receptor type 6, humanhuman

Predictions only

Length 595 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN6P29350 SETMAR-206ENST00000430981 1671 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
PTPN6P29350 DCLK1-203ENST00000379892 2101 ntTSL 5 BASIC17.65■□□□□ 0.42
PTPN6P29350 CACNA1B-206ENST00000371372 9790 ntAPPRIS P4 TSL 5 BASIC17.65■□□□□ 0.42
PTPN6P29350 KRT13-208ENST00000587544 1456 ntAPPRIS ALT2 TSL 1 (best) BASIC17.65■□□□□ 0.42
PTPN6P29350 ANKRD9-201ENST00000286918 6727 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
PTPN6P29350 RXFP4-201ENST00000368318 1240 ntAPPRIS P1 BASIC17.65■□□□□ 0.42
PTPN6P29350 RTBDN-202ENST00000393233 1000 ntAPPRIS ALT2 TSL 3 BASIC17.65■□□□□ 0.42
PTPN6P29350 LINC01122-201ENST00000422723 675 ntTSL 3 BASIC17.65■□□□□ 0.42
PTPN6P29350 METTL21A-206ENST00000432416 869 ntTSL 3 BASIC17.65■□□□□ 0.42
PTPN6P29350 AC116562.2-201ENST00000507042 360 ntBASIC17.65■□□□□ 0.42
PTPN6P29350 AC136628.4-201ENST00000520758 535 ntTSL 2 BASIC17.65■□□□□ 0.42
PTPN6P29350 AC117500.4-201ENST00000542797 617 ntTSL 3 BASIC17.65■□□□□ 0.42
PTPN6P29350 C12orf76-208ENST00000551185 496 ntTSL 2 BASIC17.65■□□□□ 0.42
PTPN6P29350 ZNF599-203ENST00000588760 948 ntTSL 2 BASIC17.65■□□□□ 0.42
PTPN6P29350 REXO1L10P-201ENST00000615707 1290 ntBASIC17.65■□□□□ 0.42
PTPN6P29350 REXO1L12P-201ENST00000622156 912 ntBASIC17.65■□□□□ 0.42
PTPN6P29350 SMN1-209ENST00000514951 1308 ntTSL 2 BASIC17.65■□□□□ 0.42
PTPN6P29350 NUDT16-201ENST00000502852 1552 ntTSL 2 BASIC17.65■□□□□ 0.42
PTPN6P29350 MFSD10-205ENST00000507555 1573 ntTSL 5 BASIC17.65■□□□□ 0.42
PTPN6P29350 ADRA1A-205ENST00000380582 2089 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
PTPN6P29350 LRRN4CL-201ENST00000317449 2585 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
PTPN6P29350 LGALS9-202ENST00000313648 1378 ntTSL 3 BASIC17.65■□□□□ 0.42
PTPN6P29350 IAH1-202ENST00000470914 2137 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
PTPN6P29350 NDN-201ENST00000331837 1931 ntAPPRIS P1 BASIC17.64■□□□□ 0.42
PTPN6P29350 PTGER3-209ENST00000460330 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC17.64■□□□□ 0.42
PTPN6P29350 PTP4A3-202ENST00000349124 2710 ntTSL 1 (best) BASIC17.64■□□□□ 0.42
PTPN6P29350 MAFF-201ENST00000338483 2490 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.42
PTPN6P29350 LGI3-201ENST00000306317 3272 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.42
PTPN6P29350 RARRES1-201ENST00000237696 1952 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
PTPN6P29350 CSPG5-202ENST00000383738 4161 ntAPPRIS ALT2 TSL 1 (best) BASIC17.64■□□□□ 0.41
PTPN6P29350 PRSS23-209ENST00000533902 2043 ntTSL 4 BASIC17.64■□□□□ 0.41
PTPN6P29350 ERICH1-201ENST00000262109 1813 ntAPPRIS P2 TSL 1 (best) BASIC17.64■□□□□ 0.41
PTPN6P29350 LRRC32-202ENST00000404995 2656 ntAPPRIS P1 TSL 5 BASIC17.64■□□□□ 0.41
PTPN6P29350 FUOM-203ENST00000368552 762 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
PTPN6P29350 TSPY15P-201ENST00000457163 923 ntBASIC17.64■□□□□ 0.41
PTPN6P29350 AC008040.2-201ENST00000461049 708 ntBASIC17.64■□□□□ 0.41
PTPN6P29350 AC026412.1-201ENST00000507290 1033 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
PTPN6P29350 CDC42EP2-202ENST00000533419 1279 ntAPPRIS P1 TSL 3 BASIC17.64■□□□□ 0.41
PTPN6P29350 ADGRD1-AS1-202ENST00000542980 1277 ntTSL 4 BASIC17.64■□□□□ 0.41
PTPN6P29350 TFEB-206ENST00000403298 2162 ntAPPRIS P1 TSL 5 BASIC17.64■□□□□ 0.41
PTPN6P29350 TRAF3-203ENST00000392745 2459 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
PTPN6P29350 AC027031.2-201ENST00000521369 1318 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
PTPN6P29350 POC1B-GALNT4-201ENST00000547474 2207 ntTSL 2 BASIC17.64■□□□□ 0.41
PTPN6P29350 GPRIN2-201ENST00000374314 1696 ntAPPRIS P1 BASIC17.64■□□□□ 0.41
PTPN6P29350 ANKRD40-201ENST00000285243 4184 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
PTPN6P29350 SNX11-201ENST00000359238 2315 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
PTPN6P29350 FDXR-203ENST00000420580 1705 ntTSL 2 BASIC17.64■□□□□ 0.41
PTPN6P29350 ADAMTS16-203ENST00000511368 2682 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
PTPN6P29350 PCBP4-210ENST00000471622 1784 ntTSL 5 BASIC17.63■□□□□ 0.41
PTPN6P29350 FKBP8-206ENST00000596558 1756 ntAPPRIS ALT1 TSL 2 BASIC17.63■□□□□ 0.41
PTPN6P29350 PANX1-201ENST00000227638 2769 ntAPPRIS P2 TSL 1 (best) BASIC17.63■□□□□ 0.41
PTPN6P29350 HSPB6-201ENST00000004982 1457 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
PTPN6P29350 SBNO2-201ENST00000361757 4923 ntAPPRIS P4 TSL 1 (best) BASIC17.63■□□□□ 0.41
PTPN6P29350 PAQR6-201ENST00000292291 1908 ntAPPRIS P3 TSL 1 (best) BASIC17.63■□□□□ 0.41
PTPN6P29350 PIP4K2C-202ENST00000422156 1558 ntTSL 2 BASIC17.63■□□□□ 0.41
PTPN6P29350 GLS-202ENST00000338435 4475 ntAPPRIS ALT1 TSL 1 (best) BASIC17.63■□□□□ 0.41
PTPN6P29350 KIFC3-201ENST00000379655 3427 ntAPPRIS P3 TSL 1 (best) BASIC17.63■□□□□ 0.41
PTPN6P29350 VSIG2-202ENST00000403470 1191 ntTSL 2 BASIC17.63■□□□□ 0.41
PTPN6P29350 LTB-210ENST00000429299 897 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
PTPN6P29350 REPIN1-210ENST00000482680 1029 ntTSL 2 BASIC17.63■□□□□ 0.41
PTPN6P29350 AC103855.2-201ENST00000533315 573 ntTSL 4 BASIC17.63■□□□□ 0.41
PTPN6P29350 AMN1-211ENST00000541931 880 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
PTPN6P29350 SMIM1-203ENST00000561886 491 ntTSL 2 BASIC17.63■□□□□ 0.41
PTPN6P29350 NUBP2-206ENST00000565134 815 ntTSL 5 BASIC17.63■□□□□ 0.41
PTPN6P29350 TYROBP-209ENST00000589517 415 ntAPPRIS ALT1 TSL 1 (best) BASIC17.63■□□□□ 0.41
PTPN6P29350 SMAGP-204ENST00000603838 816 ntTSL 2 BASIC17.63■□□□□ 0.41
PTPN6P29350 PIGV-201ENST00000078527 2367 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
PTPN6P29350 SLC39A5-201ENST00000266980 2031 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
PTPN6P29350 FAM69B-201ENST00000371691 2410 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
PTPN6P29350 ARSA-201ENST00000216124 2050 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
PTPN6P29350 MCOLN1-201ENST00000264079 2082 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
PTPN6P29350 INO80E-207ENST00000563197 2103 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
PTPN6P29350 AJUBA-202ENST00000361265 2569 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
PTPN6P29350 AC112777.1-201ENST00000540175 1423 ntBASIC17.63■□□□□ 0.41
PTPN6P29350 ZNRF2-201ENST00000323037 3460 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
PTPN6P29350 AC093677.2-201ENST00000600169 1863 ntBASIC17.63■□□□□ 0.41
PTPN6P29350 PLEKHG5-206ENST00000377748 5221 ntAPPRIS ALT2 TSL 2 BASIC17.63■□□□□ 0.41
PTPN6P29350 A4GALT-201ENST00000249005 2020 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
PTPN6P29350 NOM1-201ENST00000275820 6077 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
PTPN6P29350 TAP1-201ENST00000354258 2959 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
PTPN6P29350 HERPUD2-202ENST00000396081 3057 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
PTPN6P29350 CYP7B1-201ENST00000310193 2202 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
PTPN6P29350 POLI-207ENST00000579434 2705 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
PTPN6P29350 DAB1-202ENST00000371230 1150 ntTSL 5 BASIC17.62■□□□□ 0.41
PTPN6P29350 ZFYVE1-202ENST00000394207 1183 ntTSL 2 BASIC17.62■□□□□ 0.41
PTPN6P29350 HOXA9-202ENST00000396345 797 ntTSL 2 BASIC17.62■□□□□ 0.41
PTPN6P29350 PLEKHB2-203ENST00000404460 1167 ntTSL 2 BASIC17.62■□□□□ 0.41
PTPN6P29350 SLC39A13-212ENST00000531974 856 ntTSL 2 BASIC17.62■□□□□ 0.41
PTPN6P29350 BX088651.1-201ENST00000540551 451 ntBASIC17.62■□□□□ 0.41
PTPN6P29350 TMEM235-204ENST00000551068 1187 ntAPPRIS P1 TSL 5 BASIC17.62■□□□□ 0.41
PTPN6P29350 KANK3-205ENST00000610351 1191 ntTSL 5 BASIC17.62■□□□□ 0.41
PTPN6P29350 CHTOP-207ENST00000614256 1840 ntTSL 3 BASIC17.62■□□□□ 0.41
PTPN6P29350 SLC44A3-201ENST00000271227 2388 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
PTPN6P29350 KLHL33-202ENST00000636854 2394 ntAPPRIS P1 TSL 5 BASIC17.62■□□□□ 0.41
PTPN6P29350 SMAD4-201ENST00000342988 8769 ntAPPRIS P1 TSL 5 BASIC17.62■□□□□ 0.41
PTPN6P29350 FIBIN-201ENST00000318627 1938 ntAPPRIS P1 BASIC17.62■□□□□ 0.41
PTPN6P29350 RELL2-201ENST00000297164 2520 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
PTPN6P29350 KMT2E-207ENST00000476671 2523 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
PTPN6P29350 AKIP1-207ENST00000529876 1421 ntTSL 2 BASIC17.62■□□□□ 0.41
PTPN6P29350 XKR8-201ENST00000373884 2692 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Retrieved 100 of 98,524 protein–RNA pairs in 52 ms