Protein–RNA interactions for Protein: P19838

NFKB1, Nuclear factor NF-kappa-B p105 subunit, humanhuman

Predictions only

Length 968 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NFKB1P19838 MAFF-207ENST00000538999 2365 ntTSL 2 BASIC18.9■□□□□ 0.62
NFKB1P19838 FOXI3-201ENST00000428390 2804 ntAPPRIS P1 TSL 3 BASIC18.9■□□□□ 0.62
NFKB1P19838 HCLS1-201ENST00000314583 2000 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
NFKB1P19838 SORBS3-221ENST00000523965 2028 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
NFKB1P19838 AC034236.2-201ENST00000606662 1610 ntBASIC18.9■□□□□ 0.62
NFKB1P19838 GALNT2-201ENST00000366672 4454 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
NFKB1P19838 HNRNPM-201ENST00000325495 2494 ntAPPRIS P4 TSL 1 (best) BASIC18.9■□□□□ 0.62
NFKB1P19838 KRAS-201ENST00000256078 1119 ntAPPRIS P4 TSL 1 (best) BASIC18.9■□□□□ 0.62
NFKB1P19838 TP53BP2-201ENST00000343537 4651 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
NFKB1P19838 GYG2P1-201ENST00000357871 623 ntTSL 3 BASIC18.9■□□□□ 0.62
NFKB1P19838 AL390719.1-201ENST00000427998 977 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
NFKB1P19838 LINC00595-207ENST00000476909 792 ntTSL 2 BASIC18.9■□□□□ 0.62
NFKB1P19838 NCAM1-AS1-201ENST00000526229 1081 ntTSL 2 BASIC18.9■□□□□ 0.62
NFKB1P19838 EGLN1P1-201ENST00000531623 762 ntBASIC18.9■□□□□ 0.62
NFKB1P19838 PSMD9-208ENST00000542602 516 ntTSL 3 BASIC18.9■□□□□ 0.62
NFKB1P19838 NAPSB-206ENST00000562112 1266 ntBASIC18.9■□□□□ 0.62
NFKB1P19838 CR769767.2-201ENST00000622735 460 ntBASIC18.9■□□□□ 0.62
NFKB1P19838 CHRNB1-201ENST00000306071 2557 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
NFKB1P19838 PLA2G15-202ENST00000413021 1346 ntTSL 2 BASIC18.9■□□□□ 0.62
NFKB1P19838 PLA2G2F-201ENST00000375102 2723 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
NFKB1P19838 FAM3A-201ENST00000322269 1815 ntTSL 5 BASIC18.9■□□□□ 0.62
NFKB1P19838 PPFIA1-202ENST00000389547 4133 ntAPPRIS ALT1 TSL 1 (best) BASIC18.9■□□□□ 0.62
NFKB1P19838 NFKBIL1-201ENST00000376145 1401 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
NFKB1P19838 PRRT1-201ENST00000211413 1909 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
NFKB1P19838 SPART-209ENST00000494062 3018 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
NFKB1P19838 LONRF1-208ENST00000533751 3043 ntTSL 5 BASIC18.9■□□□□ 0.62
NFKB1P19838 EFEMP2-210ENST00000528176 1504 ntTSL 5 BASIC18.9■□□□□ 0.62
NFKB1P19838 MYLKP1-201ENST00000509077 1580 ntBASIC18.89■□□□□ 0.62
NFKB1P19838 LONP1-201ENST00000360614 3236 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.62
NFKB1P19838 DMRT3-201ENST00000190165 2183 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.62
NFKB1P19838 SERPINF2-201ENST00000324015 2284 ntAPPRIS P1 TSL 5 BASIC18.89■□□□□ 0.61
NFKB1P19838 PTPRK-218ENST00000525459 1722 ntTSL 2 BASIC18.89■□□□□ 0.61
NFKB1P19838 DOC2A-208ENST00000564944 1782 ntAPPRIS P1 TSL 5 BASIC18.89■□□□□ 0.61
NFKB1P19838 NFATC1-217ENST00000591814 4819 ntAPPRIS ALT2 TSL 1 (best) BASIC18.89■□□□□ 0.61
NFKB1P19838 CHPF-201ENST00000243776 3013 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
NFKB1P19838 RNH1-201ENST00000354420 1894 ntAPPRIS P1 TSL 5 BASIC18.89■□□□□ 0.61
NFKB1P19838 AIF1L-203ENST00000372298 849 ntTSL 3 BASIC18.89■□□□□ 0.61
NFKB1P19838 LINC01534-202ENST00000433232 554 ntTSL 3 BASIC18.89■□□□□ 0.61
NFKB1P19838 CFL2-205ENST00000555765 632 ntTSL 2 BASIC18.89■□□□□ 0.61
NFKB1P19838 SUSD3-205ENST00000617293 1076 ntAPPRIS ALT2 TSL 3 BASIC18.89■□□□□ 0.61
NFKB1P19838 STX11-201ENST00000367568 1926 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
NFKB1P19838 ACTG1-201ENST00000331925 1994 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
NFKB1P19838 DNM1-211ENST00000627061 2724 ntTSL 5 BASIC18.89■□□□□ 0.61
NFKB1P19838 TCAP-201ENST00000309889 2123 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
NFKB1P19838 GSTZ1-204ENST00000393734 1424 ntTSL 5 BASIC18.89■□□□□ 0.61
NFKB1P19838 CCDC17-209ENST00000528266 2181 ntAPPRIS P3 TSL 2 BASIC18.89■□□□□ 0.61
NFKB1P19838 GCH1-207ENST00000622544 2923 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
NFKB1P19838 PKN1-201ENST00000242783 3069 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
NFKB1P19838 GXYLT1-202ENST00000398675 7497 ntAPPRIS P4 TSL 1 (best) BASIC18.89■□□□□ 0.61
NFKB1P19838 CYP2D7-201ENST00000358097 1655 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
NFKB1P19838 PPP2R2C-206ENST00000507294 1667 ntTSL 2 BASIC18.89■□□□□ 0.61
NFKB1P19838 PSTK-201ENST00000368887 1705 ntAPPRIS P2 TSL 1 (best) BASIC18.88■□□□□ 0.61
NFKB1P19838 MROH1-202ENST00000423230 1712 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
NFKB1P19838 SLC39A7-201ENST00000374675 2153 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
NFKB1P19838 AC135050.7-201ENST00000624508 2218 ntBASIC18.88■□□□□ 0.61
NFKB1P19838 COL4A3BP-201ENST00000261415 2262 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
NFKB1P19838 ING1-202ENST00000338450 1189 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
NFKB1P19838 ACP1-205ENST00000407983 703 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
NFKB1P19838 AC009487.1-202ENST00000437683 402 ntTSL 2 BASIC18.88■□□□□ 0.61
NFKB1P19838 FBXO32-202ENST00000443022 1227 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
NFKB1P19838 RAB2A-211ENST00000531289 1058 ntTSL 2 BASIC18.88■□□□□ 0.61
NFKB1P19838 PRR29-205ENST00000579184 1052 ntAPPRIS ALT2 TSL 2 BASIC18.88■□□□□ 0.61
NFKB1P19838 RAB11B-AS1-201ENST00000593581 1013 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
NFKB1P19838 RAPH1-201ENST00000308091 2768 ntAPPRIS ALT2 TSL 1 (best) BASIC18.88■□□□□ 0.61
NFKB1P19838 SSC4D-201ENST00000275560 2801 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
NFKB1P19838 PCSK5-202ENST00000376767 2845 ntTSL 2 BASIC18.88■□□□□ 0.61
NFKB1P19838 ARID3C-201ENST00000378909 1411 ntAPPRIS P1 TSL 2 BASIC18.88■□□□□ 0.61
NFKB1P19838 SYT8-202ENST00000381968 1424 ntAPPRIS P2 TSL 5 BASIC18.88■□□□□ 0.61
NFKB1P19838 MADD-208ENST00000405573 1823 ntTSL 5 BASIC18.88■□□□□ 0.61
NFKB1P19838 P2RX2-208ENST00000542301 1881 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
NFKB1P19838 SARAF-214ENST00000545648 1976 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
NFKB1P19838 IMP3-201ENST00000314852 2028 ntAPPRIS P1 TSL 2 BASIC18.88■□□□□ 0.61
NFKB1P19838 SLC47A2-201ENST00000325411 2258 ntAPPRIS P3 TSL 1 (best) BASIC18.88■□□□□ 0.61
NFKB1P19838 PRKCI-201ENST00000295797 4950 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
NFKB1P19838 TESMIN-201ENST00000255087 2579 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
NFKB1P19838 SLCO4A1-201ENST00000217159 2776 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
NFKB1P19838 UBXN2A-201ENST00000309033 6066 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
NFKB1P19838 POLR2C-201ENST00000219252 2057 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
NFKB1P19838 TCP11-201ENST00000244645 2018 ntAPPRIS P3 TSL 1 (best) BASIC18.87■□□□□ 0.61
NFKB1P19838 ST3GAL3-201ENST00000262915 2470 ntTSL 5 BASIC18.87■□□□□ 0.61
NFKB1P19838 ORC5-201ENST00000297431 1958 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
NFKB1P19838 UXT-201ENST00000333119 574 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
NFKB1P19838 FGFR3-202ENST00000340107 4293 ntAPPRIS ALT2 TSL 5 BASIC18.87■□□□□ 0.61
NFKB1P19838 CKS1B-203ENST00000368439 912 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
NFKB1P19838 OBSL1-203ENST00000373876 5503 ntTSL 5 BASIC18.87■□□□□ 0.61
NFKB1P19838 ERICH4-201ENST00000378187 946 ntAPPRIS P1 TSL 5 BASIC18.87■□□□□ 0.61
NFKB1P19838 CAMKK2-207ENST00000404169 2116 ntAPPRIS P4 TSL 1 (best) BASIC18.87■□□□□ 0.61
NFKB1P19838 PLEKHB2-203ENST00000404460 1167 ntTSL 2 BASIC18.87■□□□□ 0.61
NFKB1P19838 AL954642.1-201ENST00000428088 538 ntTSL 3 BASIC18.87■□□□□ 0.61
NFKB1P19838 KRT8P12-201ENST00000468527 998 ntTSL 2 BASIC18.87■□□□□ 0.61
NFKB1P19838 DIO3-201ENST00000510508 2102 ntAPPRIS P1 BASIC18.87■□□□□ 0.61
NFKB1P19838 HRASLS5-205ENST00000539221 1167 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
NFKB1P19838 SIGLEC15-202ENST00000546268 1054 ntTSL 2 BASIC18.87■□□□□ 0.61
NFKB1P19838 BICD1-207ENST00000551848 1962 ntBASIC18.87■□□□□ 0.61
NFKB1P19838 KRT8P50-201ENST00000562022 1438 ntBASIC18.87■□□□□ 0.61
NFKB1P19838 SLC26A11-212ENST00000572725 1862 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
NFKB1P19838 AC010653.2-201ENST00000623505 997 ntBASIC18.87■□□□□ 0.61
NFKB1P19838 PLEKHG5-207ENST00000400913 4698 ntAPPRIS P3 TSL 5 BASIC18.87■□□□□ 0.61
NFKB1P19838 AAED1-201ENST00000375234 2863 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
NFKB1P19838 ANKS3-201ENST00000304283 2662 ntAPPRIS P1 TSL 2 BASIC18.87■□□□□ 0.61
Retrieved 100 of 98,524 protein–RNA pairs in 63 ms