Protein–RNA interactions for Protein: P17677

GAP43, Neuromodulin, humanhuman

Predictions only

Length 238 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GAP43P17677 NCK1-207ENST00000481752 1971 ntAPPRIS P1 TSL 5 BASIC20.48■□□□□ 0.87
GAP43P17677 H1FNT-201ENST00000335017 1300 ntAPPRIS P1 BASIC20.48■□□□□ 0.87
GAP43P17677 OSTM1-201ENST00000193322 4467 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
GAP43P17677 PRSS12-201ENST00000296498 4809 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
GAP43P17677 HYOU1-212ENST00000532519 2162 ntTSL 5 BASIC20.48■□□□□ 0.87
GAP43P17677 PPP2R2C-206ENST00000507294 1667 ntTSL 2 BASIC20.48■□□□□ 0.87
GAP43P17677 PCOLCE-AS1-201ENST00000442166 2537 ntTSL 2 BASIC20.48■□□□□ 0.87
GAP43P17677 BDKRB1-202ENST00000553356 1526 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
GAP43P17677 KRT15-203ENST00000393976 2394 ntAPPRIS P1 TSL 5 BASIC20.48■□□□□ 0.87
GAP43P17677 DYNLL1-209ENST00000550845 1376 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
GAP43P17677 PRRT1-201ENST00000211413 1909 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
GAP43P17677 BLOC1S3-201ENST00000433642 2601 ntAPPRIS P1 TSL 2 BASIC20.47■□□□□ 0.87
GAP43P17677 SLC22A17-204ENST00000397267 2455 ntAPPRIS P4 TSL 5 BASIC20.47■□□□□ 0.87
GAP43P17677 PDE6B-202ENST00000429163 2120 ntTSL 2 BASIC20.47■□□□□ 0.87
GAP43P17677 DOC2A-208ENST00000564944 1782 ntAPPRIS P1 TSL 5 BASIC20.47■□□□□ 0.87
GAP43P17677 CLN8-211ENST00000636934 1790 ntTSL 5 BASIC20.47■□□□□ 0.87
GAP43P17677 RNF114-201ENST00000244061 2503 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
GAP43P17677 Telomerase-vert.1-201ENST00000363312 438 ntBASIC20.47■□□□□ 0.87
GAP43P17677 AC007563.2-201ENST00000447289 552 ntTSL 5 BASIC20.47■□□□□ 0.87
GAP43P17677 PTGIR-204ENST00000596260 1009 ntTSL 2 BASIC20.47■□□□□ 0.87
GAP43P17677 OBP2B-205ENST00000618116 961 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
GAP43P17677 RNF187-203ENST00000639044 708 ntAPPRIS P2 TSL 1 (best) BASIC20.47■□□□□ 0.87
GAP43P17677 FAM3A-201ENST00000322269 1815 ntTSL 5 BASIC20.47■□□□□ 0.87
GAP43P17677 AC008393.1-201ENST00000499601 1454 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
GAP43P17677 IGFBP4-201ENST00000269593 2200 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
GAP43P17677 LEMD2-201ENST00000293760 2958 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
GAP43P17677 ATP1B1-202ENST00000367816 2608 ntAPPRIS P1 TSL 5 BASIC20.47■□□□□ 0.87
GAP43P17677 RUSC2-202ENST00000455600 5636 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
GAP43P17677 BIRC7-202ENST00000342412 1302 ntAPPRIS ALT2 TSL 1 (best) BASIC20.47■□□□□ 0.87
GAP43P17677 HEXIM2-201ENST00000307275 1528 ntAPPRIS P1 TSL 2 BASIC20.47■□□□□ 0.87
GAP43P17677 C22orf39-205ENST00000542103 1523 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
GAP43P17677 NDN-201ENST00000331837 1931 ntAPPRIS P1 BASIC20.47■□□□□ 0.87
GAP43P17677 GJB6-204ENST00000400066 1927 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
GAP43P17677 PRDM14-201ENST00000276594 2344 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
GAP43P17677 CDKN2C-201ENST00000262662 2904 ntAPPRIS P1 TSL 2 BASIC20.47■□□□□ 0.87
GAP43P17677 EDEM1-204ENST00000445686 1363 ntTSL 2 BASIC20.46■□□□□ 0.87
GAP43P17677 WIPI1-202ENST00000546360 1575 ntTSL 2 BASIC20.46■□□□□ 0.87
GAP43P17677 AP5S1-202ENST00000379567 1791 ntAPPRIS P1 TSL 2 BASIC20.46■□□□□ 0.87
GAP43P17677 BSG-201ENST00000333511 1974 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
GAP43P17677 ELMOD1-202ENST00000443271 1990 ntAPPRIS P1 TSL 2 BASIC20.46■□□□□ 0.87
GAP43P17677 DPP10-203ENST00000393147 2758 ntAPPRIS ALT2 TSL 1 (best) BASIC20.46■□□□□ 0.87
GAP43P17677 PEPD-203ENST00000436370 1638 ntTSL 2 BASIC20.46■□□□□ 0.87
GAP43P17677 SERPINH1-215ENST00000533603 2299 ntAPPRIS P1 TSL 2 BASIC20.46■□□□□ 0.87
GAP43P17677 KANSL1L-203ENST00000418791 3562 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
GAP43P17677 KLHL40-201ENST00000287777 2517 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
GAP43P17677 CD1E-211ENST00000368166 1271 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
GAP43P17677 TSPO2-202ENST00000373161 958 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
GAP43P17677 AC037459.1-202ENST00000430850 531 ntAPPRIS P1 TSL 4 BASIC20.46■□□□□ 0.87
GAP43P17677 C20orf166-AS1-202ENST00000436101 761 ntTSL 5 BASIC20.46■□□□□ 0.87
GAP43P17677 ATP5G1P1-201ENST00000448724 379 ntBASIC20.46■□□□□ 0.87
GAP43P17677 TSPO2-203ENST00000470917 699 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
GAP43P17677 COPS7A-215ENST00000543155 2127 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
GAP43P17677 AC010203.1-204ENST00000548782 407 ntBASIC20.46■□□□□ 0.87
GAP43P17677 ETFA-216ENST00000560726 942 ntTSL 3 BASIC20.46■□□□□ 0.87
GAP43P17677 AC090970.2-201ENST00000561318 865 ntTSL 5 BASIC20.46■□□□□ 0.87
GAP43P17677 AC009065.1-201ENST00000564055 1225 ntBASIC20.46■□□□□ 0.87
GAP43P17677 AQP4-AS1-204ENST00000582605 525 ntTSL 4 BASIC20.46■□□□□ 0.87
GAP43P17677 CYB561D2-210ENST00000607121 1004 ntTSL 2 BASIC20.46■□□□□ 0.87
GAP43P17677 CD177-202ENST00000607855 536 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
GAP43P17677 ANKRD36-207ENST00000639293 1168 ntAPPRIS ALT2 TSL 5 BASIC20.46■□□□□ 0.87
GAP43P17677 RBL2-201ENST00000262133 4906 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
GAP43P17677 ATRIP-201ENST00000320211 2590 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
GAP43P17677 SLC16A13-201ENST00000308027 1748 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
GAP43P17677 NCF1B-201ENST00000423083 1516 ntTSL 2 BASIC20.46■□□□□ 0.87
GAP43P17677 AL163051.1-201ENST00000569214 1512 ntBASIC20.46■□□□□ 0.87
GAP43P17677 NUDT16L1-201ENST00000304301 1349 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
GAP43P17677 KCNIP4-205ENST00000382152 1767 ntTSL 5 BASIC20.46■□□□□ 0.87
GAP43P17677 JAM2-202ENST00000400532 1757 ntAPPRIS ALT2 TSL 1 (best) BASIC20.46■□□□□ 0.87
GAP43P17677 EPB41L4B-201ENST00000374557 4006 ntAPPRIS ALT2 TSL 1 (best) BASIC20.45■□□□□ 0.86
GAP43P17677 SNAP47-201ENST00000315781 2367 ntAPPRIS P3 TSL 1 (best) BASIC20.45■□□□□ 0.86
GAP43P17677 GMDS-208ENST00000530927 1440 ntAPPRIS ALT2 TSL 1 (best) BASIC20.45■□□□□ 0.86
GAP43P17677 GRB7-202ENST00000394204 1667 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
GAP43P17677 SH3BP1-201ENST00000357436 2852 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
GAP43P17677 CERS5-203ENST00000422340 2855 ntAPPRIS ALT2 TSL 2 BASIC20.45■□□□□ 0.86
GAP43P17677 TBC1D10C-201ENST00000312390 1497 ntTSL 5 BASIC20.45■□□□□ 0.86
GAP43P17677 COQ9-210ENST00000567072 1482 ntTSL 3 BASIC20.45■□□□□ 0.86
GAP43P17677 GFI1-201ENST00000294702 2784 ntAPPRIS P1 TSL 2 BASIC20.45■□□□□ 0.86
GAP43P17677 SNX4-201ENST00000251775 2513 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
GAP43P17677 HTRA3-201ENST00000307358 2541 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
GAP43P17677 ANKS3-202ENST00000446014 2265 ntTSL 5 BASIC20.45■□□□□ 0.86
GAP43P17677 HCLS1-201ENST00000314583 2000 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
GAP43P17677 OCIAD2-201ENST00000273860 636 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
GAP43P17677 COMMD1-201ENST00000311832 911 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
GAP43P17677 ROMO1-202ENST00000374072 350 ntTSL 5 BASIC20.45■□□□□ 0.86
GAP43P17677 EHMT1-211ENST00000482340 691 ntTSL 5 BASIC20.45■□□□□ 0.86
GAP43P17677 ZNF706-206ENST00000519744 785 ntTSL 3 BASIC20.45■□□□□ 0.86
GAP43P17677 MTHFS-202ENST00000559722 948 ntTSL 2 BASIC20.45■□□□□ 0.86
GAP43P17677 CLDND2-203ENST00000601435 575 ntAPPRIS P1 TSL 3 BASIC20.45■□□□□ 0.86
GAP43P17677 OCIAD2-210ENST00000620187 697 ntTSL 3 BASIC20.45■□□□□ 0.86
GAP43P17677 DNAJB6-218ENST00000634080 1005 ntTSL 2 BASIC20.45■□□□□ 0.86
GAP43P17677 HCK-202ENST00000375852 2082 ntAPPRIS ALT2 TSL 1 (best) BASIC20.45■□□□□ 0.86
GAP43P17677 C6orf118-201ENST00000230301 1812 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
GAP43P17677 STYXL1-208ENST00000451157 1570 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
GAP43P17677 SHISA5-220ENST00000619810 2385 ntTSL 2 BASIC20.45■□□□□ 0.86
GAP43P17677 LGI2-201ENST00000382114 6428 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
GAP43P17677 AC007743.1-203ENST00000447423 1623 ntTSL 2 BASIC20.45■□□□□ 0.86
GAP43P17677 CASKIN2-205ENST00000581870 1612 ntTSL 2 BASIC20.45■□□□□ 0.86
GAP43P17677 DMRT3-201ENST00000190165 2183 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
GAP43P17677 GGPS1-206ENST00000488594 1396 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
GAP43P17677 EPB41L2-211ENST00000525271 2568 ntTSL 2 BASIC20.44■□□□□ 0.86
Retrieved 100 of 98,524 protein–RNA pairs in 42 ms