Protein–RNA interactions for Protein: P13236

CCL4, C-C motif chemokine 4, humanhuman

Predictions only

Length 92 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCL4P13236 CMTM1-213ENST00000529506 581 ntAPPRIS ALT2 TSL 1 (best) BASIC17.53■□□□□ 0.4
CCL4P13236 TPM1-218ENST00000559281 851 ntTSL 5 BASIC17.53■□□□□ 0.4
CCL4P13236 ANAPC11-204ENST00000571024 668 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
CCL4P13236 ANAPC11-218ENST00000582222 523 ntTSL 2 BASIC17.53■□□□□ 0.4
CCL4P13236 AC020909.1-201ENST00000599632 1265 ntAPPRIS P1 TSL 5 BASIC17.53■□□□□ 0.4
CCL4P13236 SHB-201ENST00000377707 2783 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
CCL4P13236 ZNF510-203ENST00000375231 5616 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
CCL4P13236 GPR142-201ENST00000335666 1437 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
CCL4P13236 PRMT8-202ENST00000382622 2366 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
CCL4P13236 ARSI-203ENST00000515301 1429 ntTSL 4 BASIC17.53■□□□□ 0.4
CCL4P13236 PCSK6-217ENST00000618548 4269 ntAPPRIS ALT2 TSL 1 (best) BASIC17.53■□□□□ 0.4
CCL4P13236 GPR146-201ENST00000397095 1969 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
CCL4P13236 SNX19-209ENST00000530356 1562 ntTSL 2 BASIC17.53■□□□□ 0.4
CCL4P13236 MEF2A-202ENST00000354410 5824 ntAPPRIS P3 TSL 1 (best) BASIC17.53■□□□□ 0.4
CCL4P13236 PHOX2B-201ENST00000226382 3030 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
CCL4P13236 MAGEA6-201ENST00000329342 1740 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
CCL4P13236 MAGEA3-201ENST00000370278 1724 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
CCL4P13236 NFKBIZ-201ENST00000326151 2058 ntTSL 2 BASIC17.52■□□□□ 0.4
CCL4P13236 ACTL6B-201ENST00000160382 1537 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
CCL4P13236 MLST8-232ENST00000569417 1870 ntAPPRIS P3 TSL 1 (best) BASIC17.52■□□□□ 0.4
CCL4P13236 HEIH-201ENST00000623091 1652 ntBASIC17.52■□□□□ 0.4
CCL4P13236 ANKRD13D-202ENST00000447274 2881 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
CCL4P13236 SPOCK3-204ENST00000502330 2180 ntAPPRIS ALT2 TSL 1 (best) BASIC17.52■□□□□ 0.4
CCL4P13236 AC093484.2-201ENST00000580996 2166 ntBASIC17.52■□□□□ 0.4
CCL4P13236 PDLIM2-206ENST00000409141 1463 ntTSL 2 BASIC17.52■□□□□ 0.4
CCL4P13236 CD81-AS1-201ENST00000413483 1460 ntTSL 2 BASIC17.52■□□□□ 0.4
CCL4P13236 ATP5J-201ENST00000284971 614 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
CCL4P13236 HDDC3-201ENST00000330334 1047 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
CCL4P13236 CD1E-203ENST00000368156 861 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
CCL4P13236 C1orf43-204ENST00000368518 1278 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
CCL4P13236 MRPL43-208ENST00000370242 884 ntTSL 2 BASIC17.52■□□□□ 0.4
CCL4P13236 ROMO1-204ENST00000374078 498 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
CCL4P13236 CXorf40A-202ENST00000393985 1148 ntAPPRIS P3 TSL 1 (best) BASIC17.52■□□□□ 0.4
CCL4P13236 RPL8-202ENST00000394920 965 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
CCL4P13236 KRT16P4-201ENST00000453883 522 ntBASIC17.52■□□□□ 0.4
CCL4P13236 BET1L-206ENST00000486280 665 ntTSL 3 BASIC17.52■□□□□ 0.4
CCL4P13236 BMF-207ENST00000559701 630 ntTSL 3 BASIC17.52■□□□□ 0.4
CCL4P13236 SPINT1-AS1-202ENST00000564302 643 ntTSL 2 BASIC17.52■□□□□ 0.4
CCL4P13236 AC007220.1-201ENST00000572466 1055 ntTSL 3 BASIC17.52■□□□□ 0.4
CCL4P13236 AP005901.3-202ENST00000581653 237 ntBASIC17.52■□□□□ 0.4
CCL4P13236 TYROBP-205ENST00000585901 620 ntTSL 3 BASIC17.52■□□□□ 0.4
CCL4P13236 AL353801.3-201ENST00000609898 542 ntBASIC17.52■□□□□ 0.4
CCL4P13236 ISG15-203ENST00000624697 788 ntAPPRIS ALT2 TSL 3 BASIC17.52■□□□□ 0.4
CCL4P13236 ZNF582-207ENST00000619584 2297 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
CCL4P13236 EFEMP2-210ENST00000528176 1504 ntTSL 5 BASIC17.52■□□□□ 0.39
CCL4P13236 INTS11-249ENST00000618806 1523 ntTSL 2 BASIC17.52■□□□□ 0.39
CCL4P13236 HCN1-202ENST00000634658 4738 ntTSL 3 BASIC17.52■□□□□ 0.39
CCL4P13236 LYPD3-201ENST00000244333 1694 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
CCL4P13236 NFYC-AS1-201ENST00000606277 1687 ntBASIC17.52■□□□□ 0.39
CCL4P13236 CTBP2-202ENST00000334808 2130 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
CCL4P13236 NRL-206ENST00000561028 2103 ntAPPRIS P1 TSL 2 BASIC17.51■□□□□ 0.39
CCL4P13236 WDR34-201ENST00000372715 1755 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
CCL4P13236 STX5-202ENST00000377897 1785 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
CCL4P13236 SLC16A5-202ENST00000450736 2051 ntAPPRIS P2 TSL 1 (best) BASIC17.51■□□□□ 0.39
CCL4P13236 ANTXR1-203ENST00000409829 2221 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
CCL4P13236 LCE1F-201ENST00000334371 357 ntAPPRIS P1 BASIC17.51■□□□□ 0.39
CCL4P13236 MAL-203ENST00000353004 873 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
CCL4P13236 DMD-208ENST00000378680 1858 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
CCL4P13236 CDKN1C-201ENST00000380725 1220 ntAPPRIS ALT2 TSL 2 BASIC17.51■□□□□ 0.39
CCL4P13236 EXOSC3-202ENST00000396521 768 ntTSL 2 BASIC17.51■□□□□ 0.39
CCL4P13236 C7orf49-202ENST00000424142 1738 ntTSL 2 BASIC17.51■□□□□ 0.39
CCL4P13236 LINC01237-203ENST00000430555 843 ntTSL 4 BASIC17.51■□□□□ 0.39
CCL4P13236 AC092159.3-201ENST00000439196 571 ntTSL 4 BASIC17.51■□□□□ 0.39
CCL4P13236 DMKN-215ENST00000451297 1111 ntAPPRIS ALT2 TSL 1 (best) BASIC17.51■□□□□ 0.39
CCL4P13236 NOP16-205ENST00000509257 1000 ntTSL 2 BASIC17.51■□□□□ 0.39
CCL4P13236 VPS26B-202ENST00000525095 1558 ntAPPRIS P1 TSL 5 BASIC17.51■□□□□ 0.39
CCL4P13236 AC009065.1-201ENST00000564055 1225 ntBASIC17.51■□□□□ 0.39
CCL4P13236 CTDNEP1-207ENST00000572043 857 ntTSL 3 BASIC17.51■□□□□ 0.39
CCL4P13236 AC011511.2-201ENST00000592893 918 ntTSL 3 BASIC17.51■□□□□ 0.39
CCL4P13236 DEF8-228ENST00000610455 816 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
CCL4P13236 HSP90B1-211ENST00000640977 1127 ntTSL 5 BASIC17.51■□□□□ 0.39
CCL4P13236 HOXC13-201ENST00000243056 2423 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
CCL4P13236 SERPINH1-215ENST00000533603 2299 ntAPPRIS P1 TSL 2 BASIC17.51■□□□□ 0.39
CCL4P13236 NSUN5P1-202ENST00000421140 1535 ntBASIC17.51■□□□□ 0.39
CCL4P13236 NSUN5P2-203ENST00000457352 1529 ntBASIC17.51■□□□□ 0.39
CCL4P13236 DIO3OS-212ENST00000557661 1937 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
CCL4P13236 LRFN4-201ENST00000309602 2431 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
CCL4P13236 DMRTA2-202ENST00000418121 2840 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
CCL4P13236 MYEOV-202ENST00000441339 1996 ntAPPRIS P3 TSL 2 BASIC17.5■□□□□ 0.39
CCL4P13236 ELMOD1-202ENST00000443271 1990 ntAPPRIS P1 TSL 2 BASIC17.5■□□□□ 0.39
CCL4P13236 CRTC1-204ENST00000601916 1834 ntTSL 5 BASIC17.5■□□□□ 0.39
CCL4P13236 PAQR4-201ENST00000293978 2644 ntTSL 2 BASIC17.5■□□□□ 0.39
CCL4P13236 SPIN2B-202ENST00000333933 1258 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
CCL4P13236 NPFFR2-202ENST00000344413 1234 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
CCL4P13236 DYNLL1-203ENST00000392509 814 ntAPPRIS P1 TSL 3 BASIC17.5■□□□□ 0.39
CCL4P13236 ROMO1-205ENST00000397416 288 ntAPPRIS P1 TSL 3 BASIC17.5■□□□□ 0.39
CCL4P13236 CRELD2-202ENST00000403427 1242 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
CCL4P13236 MRPL28-203ENST00000429738 310 ntTSL 2 BASIC17.5■□□□□ 0.39
CCL4P13236 NTMT1-205ENST00000459968 1123 ntTSL 2 BASIC17.5■□□□□ 0.39
CCL4P13236 NTMT1-207ENST00000482347 1072 ntTSL 2 BASIC17.5■□□□□ 0.39
CCL4P13236 AP002469.2-201ENST00000531724 424 ntBASIC17.5■□□□□ 0.39
CCL4P13236 LAT-211ENST00000566177 786 ntAPPRIS ALT2 TSL 1 (best) BASIC17.5■□□□□ 0.39
CCL4P13236 AC104971.2-201ENST00000588144 1209 ntTSL 2 BASIC17.5■□□□□ 0.39
CCL4P13236 LINC01714-202ENST00000635451 896 ntTSL 5 BASIC17.5■□□□□ 0.39
CCL4P13236 ZNF579-201ENST00000325421 2899 ntAPPRIS P1 TSL 2 BASIC17.5■□□□□ 0.39
CCL4P13236 MED25-201ENST00000312865 2332 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
CCL4P13236 RGMB-AS1-201ENST00000498871 1903 ntTSL 2 BASIC17.5■□□□□ 0.39
CCL4P13236 MTMR9LP-203ENST00000426597 1545 ntBASIC17.5■□□□□ 0.39
CCL4P13236 RIPK2-201ENST00000220751 2584 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
CCL4P13236 CUEDC1-202ENST00000407144 2190 ntAPPRIS P1 TSL 5 BASIC17.5■□□□□ 0.39
Retrieved 100 of 98,524 protein–RNA pairs in 20 ms