Protein–RNA interactions for Protein: P12035

KRT3, Keratin, type II cytoskeletal 3, humanhuman

Predictions only

Length 628 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRT3P12035 IQCJ-SCHIP1-207ENST00000638749 2633 ntAPPRIS P3 TSL 1 (best) BASIC19.58■□□□□ 0.73
KRT3P12035 MPP5-201ENST00000261681 5552 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
KRT3P12035 AC090340.1-201ENST00000620778 4980 ntBASIC19.58■□□□□ 0.73
KRT3P12035 UBP1-202ENST00000283629 4148 ntAPPRIS P3 TSL 1 (best) BASIC19.58■□□□□ 0.73
KRT3P12035 SYTL1-208ENST00000543823 2229 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
KRT3P12035 FAM182B-202ENST00000376404 456 ntAPPRIS ALT2 BASIC19.58■□□□□ 0.72
KRT3P12035 AC012618.3-203ENST00000426044 917 ntTSL 2 BASIC19.58■□□□□ 0.72
KRT3P12035 AC007663.1-201ENST00000438948 1240 ntBASIC19.58■□□□□ 0.72
KRT3P12035 CHCHD10-202ENST00000484558 1171 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
KRT3P12035 FAU-207ENST00000529639 847 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
KRT3P12035 EGLN1P1-201ENST00000531623 762 ntBASIC19.58■□□□□ 0.72
KRT3P12035 ATG4B-226ENST00000625810 370 ntTSL 4 BASIC19.58■□□□□ 0.72
KRT3P12035 STRADB-202ENST00000392249 2190 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
KRT3P12035 CYP2D8P-201ENST00000433633 1490 ntBASIC19.58■□□□□ 0.72
KRT3P12035 SEMA6C-210ENST00000621728 1918 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
KRT3P12035 BMP8B-201ENST00000372827 4822 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
KRT3P12035 PDE6B-202ENST00000429163 2120 ntTSL 2 BASIC19.58■□□□□ 0.72
KRT3P12035 OGFOD3-202ENST00000329197 1652 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
KRT3P12035 TICAM1-202ENST00000621756 1650 ntTSL 5 BASIC19.58■□□□□ 0.72
KRT3P12035 MARK2-201ENST00000350490 2903 ntAPPRIS ALT2 TSL 1 (best) BASIC19.58■□□□□ 0.72
KRT3P12035 NF2-203ENST00000353887 1845 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
KRT3P12035 CLK1-205ENST00000434813 2026 ntTSL 2 BASIC19.58■□□□□ 0.72
KRT3P12035 MFSD10-205ENST00000507555 1573 ntTSL 5 BASIC19.57■□□□□ 0.72
KRT3P12035 MLX-201ENST00000246912 2586 ntAPPRIS P3 TSL 1 (best) BASIC19.57■□□□□ 0.72
KRT3P12035 PPFIA1-202ENST00000389547 4133 ntAPPRIS ALT1 TSL 1 (best) BASIC19.57■□□□□ 0.72
KRT3P12035 CCDC50-202ENST00000392456 2454 ntAPPRIS P4 TSL 1 (best) BASIC19.57■□□□□ 0.72
KRT3P12035 ASZ1-201ENST00000284629 1865 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
KRT3P12035 TRAPPC3-204ENST00000373166 1265 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
KRT3P12035 TNNT3-206ENST00000381579 1042 ntAPPRIS ALT2 TSL 1 (best) BASIC19.57■□□□□ 0.72
KRT3P12035 RNF144A-AS1-204ENST00000437589 618 ntTSL 2 BASIC19.57■□□□□ 0.72
KRT3P12035 IKBKB-210ENST00000518983 447 ntTSL 2 BASIC19.57■□□□□ 0.72
KRT3P12035 FDXR-214ENST00000581530 1827 ntAPPRIS P3 TSL 1 (best) BASIC19.57■□□□□ 0.72
KRT3P12035 SNX27-203ENST00000368843 7197 ntAPPRIS P3 TSL 1 (best) BASIC19.57■□□□□ 0.72
KRT3P12035 AP5S1-202ENST00000379567 1791 ntAPPRIS P1 TSL 2 BASIC19.57■□□□□ 0.72
KRT3P12035 C5orf30-203ENST00000515669 1573 ntAPPRIS P1 TSL 3 BASIC19.57■□□□□ 0.72
KRT3P12035 SLC16A13-201ENST00000308027 1748 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
KRT3P12035 UMOD-202ENST00000396134 2408 ntAPPRIS ALT2 TSL 2 BASIC19.56■□□□□ 0.72
KRT3P12035 AZIN1-201ENST00000337198 4721 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
KRT3P12035 ANKRD17-211ENST00000639793 3486 ntTSL 5 BASIC19.56■□□□□ 0.72
KRT3P12035 ANXA3-201ENST00000264908 1657 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
KRT3P12035 ZCCHC17-205ENST00000615916 1652 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
KRT3P12035 CASD1-201ENST00000297273 3942 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
KRT3P12035 IRF7-202ENST00000348655 1801 ntAPPRIS ALT2 TSL 1 (best) BASIC19.56■□□□□ 0.72
KRT3P12035 CD164L2-202ENST00000374027 1457 ntAPPRIS P3 TSL 1 (best) BASIC19.56■□□□□ 0.72
KRT3P12035 AC034236.2-201ENST00000606662 1610 ntBASIC19.56■□□□□ 0.72
KRT3P12035 KRAS-201ENST00000256078 1119 ntAPPRIS P4 TSL 1 (best) BASIC19.56■□□□□ 0.72
KRT3P12035 SSNA1-201ENST00000322310 896 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
KRT3P12035 UNC5D-204ENST00000420357 2966 ntTSL 5 BASIC19.56■□□□□ 0.72
KRT3P12035 ELP6-205ENST00000439305 880 ntTSL 2 BASIC19.56■□□□□ 0.72
KRT3P12035 KRT18P41-201ENST00000518924 1277 ntBASIC19.56■□□□□ 0.72
KRT3P12035 SLC39A2-203ENST00000554422 1259 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
KRT3P12035 NAPSB-206ENST00000562112 1266 ntBASIC19.56■□□□□ 0.72
KRT3P12035 AL513523.10-201ENST00000623024 1186 ntAPPRIS P1 TSL 5 BASIC19.56■□□□□ 0.72
KRT3P12035 AC010947.1-201ENST00000623454 693 ntBASIC19.56■□□□□ 0.72
KRT3P12035 MUTYH-202ENST00000355498 1776 ntAPPRIS ALT2 TSL 1 (best) BASIC19.56■□□□□ 0.72
KRT3P12035 RNF135-201ENST00000324689 1905 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
KRT3P12035 MCOLN2-201ENST00000284027 1729 ntAPPRIS P1 TSL 5 BASIC19.56■□□□□ 0.72
KRT3P12035 LZTS2-202ENST00000370223 2883 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
KRT3P12035 EIF5-201ENST00000216554 5945 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
KRT3P12035 CHRNA4-201ENST00000370263 5577 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
KRT3P12035 EFEMP2-210ENST00000528176 1504 ntTSL 5 BASIC19.56■□□□□ 0.72
KRT3P12035 AP003774.1-201ENST00000316124 2340 ntTSL 2 BASIC19.56■□□□□ 0.72
KRT3P12035 CHRAC1-201ENST00000220913 2488 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
KRT3P12035 KRT14-201ENST00000167586 1662 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
KRT3P12035 TMTC1-203ENST00000539277 2758 ntAPPRIS P2 TSL 1 (best) BASIC19.55■□□□□ 0.72
KRT3P12035 ALKBH4-201ENST00000292566 2105 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
KRT3P12035 IFFO1-212ENST00000619571 2724 ntTSL 2 BASIC19.55■□□□□ 0.72
KRT3P12035 DDX42-216ENST00000583590 4148 ntAPPRIS P1 TSL 5 BASIC19.55■□□□□ 0.72
KRT3P12035 POMT2-201ENST00000261534 4876 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
KRT3P12035 CLN8-211ENST00000636934 1790 ntTSL 5 BASIC19.55■□□□□ 0.72
KRT3P12035 ADK-206ENST00000541550 2222 ntTSL 2 BASIC19.55■□□□□ 0.72
KRT3P12035 OR10H2-201ENST00000305899 1041 ntAPPRIS P1 BASIC19.55■□□□□ 0.72
KRT3P12035 ERICH4-201ENST00000378187 946 ntAPPRIS P1 TSL 5 BASIC19.55■□□□□ 0.72
KRT3P12035 AL390719.1-201ENST00000427998 977 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
KRT3P12035 AC009487.1-202ENST00000437683 402 ntTSL 2 BASIC19.55■□□□□ 0.72
KRT3P12035 AL451069.1-201ENST00000455414 634 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
KRT3P12035 LINC00595-207ENST00000476909 792 ntTSL 2 BASIC19.55■□□□□ 0.72
KRT3P12035 PTPRK-218ENST00000525459 1722 ntTSL 2 BASIC19.55■□□□□ 0.72
KRT3P12035 LARGE2-206ENST00000529052 2459 ntAPPRIS ALT2 TSL 2 BASIC19.55■□□□□ 0.72
KRT3P12035 AC036111.1-201ENST00000533973 1582 ntBASIC19.55■□□□□ 0.72
KRT3P12035 RAB11B-AS1-201ENST00000593581 1013 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
KRT3P12035 AC010653.2-201ENST00000623505 997 ntBASIC19.55■□□□□ 0.72
KRT3P12035 CACNA1A-225ENST00000636389 8137 ntAPPRIS ALT2 TSL 5 BASIC19.55■□□□□ 0.72
KRT3P12035 IGFBP7-AS1-201ENST00000499667 1389 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
KRT3P12035 FGFBP3-201ENST00000311575 2545 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
KRT3P12035 APLP2-210ENST00000528499 2530 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
KRT3P12035 SLC5A10-203ENST00000395645 2069 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
KRT3P12035 SERPINA4-201ENST00000298841 1784 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
KRT3P12035 RELL2-202ENST00000444782 2154 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
KRT3P12035 NPTX2-201ENST00000265634 2700 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
KRT3P12035 TOX2-205ENST00000423191 1709 ntTSL 2 BASIC19.54■□□□□ 0.72
KRT3P12035 ZBTB10-205ENST00000610895 2833 ntAPPRIS ALT2 TSL 2 BASIC19.54■□□□□ 0.72
KRT3P12035 HLA-G-205ENST00000428701 1578 ntAPPRIS P2 BASIC19.54■□□□□ 0.72
KRT3P12035 MYLKP1-201ENST00000509077 1580 ntBASIC19.54■□□□□ 0.72
KRT3P12035 STK10-201ENST00000176763 6060 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
KRT3P12035 ARID3C-201ENST00000378909 1411 ntAPPRIS P1 TSL 2 BASIC19.54■□□□□ 0.72
KRT3P12035 PLEKHG5-212ENST00000537245 4794 ntAPPRIS ALT2 TSL 2 BASIC19.54■□□□□ 0.72
KRT3P12035 GYG2P1-201ENST00000357871 623 ntTSL 3 BASIC19.54■□□□□ 0.72
KRT3P12035 INGX-201ENST00000359239 846 ntBASIC19.54■□□□□ 0.72
KRT3P12035 AIF1L-203ENST00000372298 849 ntTSL 3 BASIC19.54■□□□□ 0.72
Retrieved 100 of 98,524 protein–RNA pairs in 28.4 ms