Protein–RNA interactions for Protein: P0C0S8

HIST1H2AG, Histone H2A type 1, humanhuman

Predicted RBP Predictions only

Length 130 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HIST1H2AGP0C0S8 SLC22A17-204ENST00000397267 2455 ntAPPRIS P4 TSL 5 BASIC18.23■□□□□ 0.51
HIST1H2AGP0C0S8 KRT15-203ENST00000393976 2394 ntAPPRIS P1 TSL 5 BASIC18.23■□□□□ 0.51
HIST1H2AGP0C0S8 RTEL1-204ENST00000370003 2273 ntTSL 2 BASIC18.23■□□□□ 0.51
HIST1H2AGP0C0S8 TCAIM-203ENST00000396078 2178 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
HIST1H2AGP0C0S8 ZNF692-204ENST00000451251 2065 ntAPPRIS ALT2 TSL 2 BASIC18.23■□□□□ 0.51
HIST1H2AGP0C0S8 ZGPAT-202ENST00000355969 1871 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
HIST1H2AGP0C0S8 TBX20-201ENST00000408931 1871 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
HIST1H2AGP0C0S8 DNAJC8-201ENST00000263697 1759 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
HIST1H2AGP0C0S8 TRIM61-201ENST00000329314 1582 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
HIST1H2AGP0C0S8 SMN2-202ENST00000380742 1388 ntAPPRIS ALT2 TSL 5 BASIC18.23■□□□□ 0.51
HIST1H2AGP0C0S8 TPPP3-201ENST00000290942 1116 ntAPPRIS P1 TSL 2 BASIC18.23■□□□□ 0.51
HIST1H2AGP0C0S8 NPM3-201ENST00000370110 877 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
HIST1H2AGP0C0S8 CCDC107-202ENST00000378406 1016 ntAPPRIS ALT2 TSL 2 BASIC18.23■□□□□ 0.51
HIST1H2AGP0C0S8 TPPP3-202ENST00000393957 1058 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
HIST1H2AGP0C0S8 CXADR-204ENST00000400166 1080 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
HIST1H2AGP0C0S8 AL390955.1-201ENST00000428694 934 ntBASIC18.23■□□□□ 0.51
HIST1H2AGP0C0S8 AL139246.2-201ENST00000456687 1297 ntTSL 5 BASIC18.23■□□□□ 0.51
HIST1H2AGP0C0S8 GCFC2-207ENST00000470503 1066 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
HIST1H2AGP0C0S8 AC026412.1-201ENST00000507290 1033 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
HIST1H2AGP0C0S8 MLF2-210ENST00000542154 838 ntAPPRIS P1 TSL 5 BASIC18.23■□□□□ 0.51
HIST1H2AGP0C0S8 PSMD9-208ENST00000542602 516 ntTSL 3 BASIC18.23■□□□□ 0.51
HIST1H2AGP0C0S8 AL353719.1-201ENST00000566847 864 ntBASIC18.23■□□□□ 0.51
HIST1H2AGP0C0S8 RPS27A-211ENST00000639844 606 ntTSL 5 BASIC18.23■□□□□ 0.51
HIST1H2AGP0C0S8 AC116562.4-202ENST00000641738 218 ntBASIC18.23■□□□□ 0.51
HIST1H2AGP0C0S8 AC090164.3-201ENST00000610780 2143 ntBASIC18.23■□□□□ 0.51
HIST1H2AGP0C0S8 GJB6-204ENST00000400066 1927 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
HIST1H2AGP0C0S8 NLE1-203ENST00000586869 5286 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
HIST1H2AGP0C0S8 AL365232.1-201ENST00000423730 1636 ntAPPRIS P1 TSL 5 BASIC18.23■□□□□ 0.51
HIST1H2AGP0C0S8 INTS11-249ENST00000618806 1523 ntTSL 2 BASIC18.23■□□□□ 0.51
HIST1H2AGP0C0S8 CDK11A-205ENST00000378633 2458 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
HIST1H2AGP0C0S8 ST3GAL3-206ENST00000351035 2377 ntTSL 5 BASIC18.23■□□□□ 0.51
HIST1H2AGP0C0S8 SPATA6L-207ENST00000475086 1444 ntAPPRIS P1 TSL 2 BASIC18.23■□□□□ 0.51
HIST1H2AGP0C0S8 CCNC-207ENST00000518714 1426 ntTSL 5 BASIC18.23■□□□□ 0.51
HIST1H2AGP0C0S8 ALDH5A1-201ENST00000348925 2266 ntAPPRIS P4 TSL 1 (best) BASIC18.23■□□□□ 0.51
HIST1H2AGP0C0S8 AC005082.1-201ENST00000413042 2259 ntBASIC18.23■□□□□ 0.51
HIST1H2AGP0C0S8 IFRD2-204ENST00000436390 2275 ntAPPRIS P1 TSL 2 BASIC18.23■□□□□ 0.51
HIST1H2AGP0C0S8 CALM2-201ENST00000272298 1302 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
HIST1H2AGP0C0S8 DHRS12-201ENST00000218981 1970 ntTSL 2 BASIC18.22■□□□□ 0.51
HIST1H2AGP0C0S8 BLOC1S3-201ENST00000433642 2601 ntAPPRIS P1 TSL 2 BASIC18.22■□□□□ 0.51
HIST1H2AGP0C0S8 IRF5-202ENST00000357234 1680 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
HIST1H2AGP0C0S8 CPSF3-201ENST00000238112 2345 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
HIST1H2AGP0C0S8 KRT8-216ENST00000552551 2126 ntAPPRIS P1 TSL 2 BASIC18.22■□□□□ 0.51
HIST1H2AGP0C0S8 ATRIP-201ENST00000320211 2590 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
HIST1H2AGP0C0S8 PRDM8-202ENST00000415738 3124 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
HIST1H2AGP0C0S8 SYT15-202ENST00000374323 6428 ntTSL 2 BASIC18.22■□□□□ 0.51
HIST1H2AGP0C0S8 EI24-201ENST00000278903 2455 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
HIST1H2AGP0C0S8 SNAP47-201ENST00000315781 2367 ntAPPRIS P3 TSL 1 (best) BASIC18.22■□□□□ 0.51
HIST1H2AGP0C0S8 HDAC11-205ENST00000404548 577 ntTSL 4 BASIC18.22■□□□□ 0.51
HIST1H2AGP0C0S8 CYR61-201ENST00000451137 2290 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
HIST1H2AGP0C0S8 TNFAIP2-201ENST00000333007 4175 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
HIST1H2AGP0C0S8 BRI3BP-201ENST00000341446 6648 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
HIST1H2AGP0C0S8 AC135782.1-201ENST00000537498 2154 ntTSL 2 BASIC18.22■□□□□ 0.51
HIST1H2AGP0C0S8 SLC35B2-207ENST00000619636 2063 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
HIST1H2AGP0C0S8 LURAP1-201ENST00000371980 1854 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
HIST1H2AGP0C0S8 TMEM198-202ENST00000373883 2218 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
HIST1H2AGP0C0S8 FIGNL2-202ENST00000618634 4812 ntAPPRIS P1 TSL 5 BASIC18.21■□□□□ 0.51
HIST1H2AGP0C0S8 PDLIM4-201ENST00000253754 2282 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
HIST1H2AGP0C0S8 HSPB8-201ENST00000281938 2152 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
HIST1H2AGP0C0S8 BTG3-201ENST00000339775 1485 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
HIST1H2AGP0C0S8 LYSMD4-210ENST00000545021 2431 ntTSL 4 BASIC18.21■□□□□ 0.51
HIST1H2AGP0C0S8 KHNYN-206ENST00000556842 2443 ntAPPRIS P1 TSL 2 BASIC18.21■□□□□ 0.51
HIST1H2AGP0C0S8 ST3GAL4-203ENST00000392669 1724 ntAPPRIS ALT1 TSL 1 (best) BASIC18.21■□□□□ 0.51
HIST1H2AGP0C0S8 TMEM250-201ENST00000418388 2823 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
HIST1H2AGP0C0S8 CACNA2D2-201ENST00000266039 5476 ntAPPRIS ALT2 TSL 1 (best) BASIC18.21■□□□□ 0.51
HIST1H2AGP0C0S8 YAP1-209ENST00000537274 5350 ntAPPRIS ALT2 TSL 5 BASIC18.21■□□□□ 0.51
HIST1H2AGP0C0S8 EGLN2-201ENST00000303961 2102 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
HIST1H2AGP0C0S8 FAM182B-202ENST00000376404 456 ntAPPRIS ALT2 BASIC18.21■□□□□ 0.51
HIST1H2AGP0C0S8 AL445685.1-201ENST00000425802 762 ntTSL 3 BASIC18.21■□□□□ 0.51
HIST1H2AGP0C0S8 AC128688.1-201ENST00000487626 519 ntBASIC18.21■□□□□ 0.51
HIST1H2AGP0C0S8 MVB12A-204ENST00000528515 686 ntTSL 5 BASIC18.21■□□□□ 0.51
HIST1H2AGP0C0S8 SLC39A13-212ENST00000531974 856 ntTSL 2 BASIC18.21■□□□□ 0.51
HIST1H2AGP0C0S8 BX088651.1-201ENST00000540551 451 ntBASIC18.21■□□□□ 0.51
HIST1H2AGP0C0S8 AC020913.2-201ENST00000601929 629 ntTSL 5 BASIC18.21■□□□□ 0.51
HIST1H2AGP0C0S8 SRMS-201ENST00000217188 1516 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
HIST1H2AGP0C0S8 SAYSD1-201ENST00000229903 2020 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
HIST1H2AGP0C0S8 NFATC4-228ENST00000556759 2025 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
HIST1H2AGP0C0S8 TWIST2-202ENST00000612363 1404 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
HIST1H2AGP0C0S8 GBGT1-208ENST00000540636 1934 ntTSL 2 BASIC18.21■□□□□ 0.51
HIST1H2AGP0C0S8 HMGA1-205ENST00000447654 2159 ntAPPRIS P4 TSL 1 (best) BASIC18.21■□□□□ 0.51
HIST1H2AGP0C0S8 SMPD1-203ENST00000527275 2188 ntAPPRIS P3 TSL 2 BASIC18.21■□□□□ 0.51
HIST1H2AGP0C0S8 UVSSA-207ENST00000511216 2927 ntAPPRIS P2 TSL 1 (best) BASIC18.21■□□□□ 0.51
HIST1H2AGP0C0S8 ATP6V1D-201ENST00000216442 1845 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
HIST1H2AGP0C0S8 PHRF1-205ENST00000533464 5218 ntAPPRIS ALT2 TSL 1 (best) BASIC18.21■□□□□ 0.51
HIST1H2AGP0C0S8 MFSD10-205ENST00000507555 1573 ntTSL 5 BASIC18.21■□□□□ 0.51
HIST1H2AGP0C0S8 UMOD-201ENST00000302509 2477 ntAPPRIS P3 TSL 5 BASIC18.21■□□□□ 0.5
HIST1H2AGP0C0S8 SCARB2-201ENST00000264896 4792 ntAPPRIS P2 TSL 1 (best) BASIC18.21■□□□□ 0.5
HIST1H2AGP0C0S8 ZNF512B-201ENST00000369888 5919 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.5
HIST1H2AGP0C0S8 MCOLN2-201ENST00000284027 1729 ntAPPRIS P1 TSL 5 BASIC18.2■□□□□ 0.5
HIST1H2AGP0C0S8 IGFALS-202ENST00000415638 2136 ntTSL 2 BASIC18.2■□□□□ 0.5
HIST1H2AGP0C0S8 IFRD2-202ENST00000417626 2109 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
HIST1H2AGP0C0S8 RNF114-201ENST00000244061 2503 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
HIST1H2AGP0C0S8 MAN1B1-207ENST00000535144 2296 ntTSL 2 BASIC18.2■□□□□ 0.5
HIST1H2AGP0C0S8 RENBP-202ENST00000393700 1388 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
HIST1H2AGP0C0S8 KCNK4-205ENST00000538767 1389 ntTSL 2 BASIC18.2■□□□□ 0.5
HIST1H2AGP0C0S8 SLC35A3-224ENST00000640732 1777 ntTSL 5 BASIC18.2■□□□□ 0.5
HIST1H2AGP0C0S8 COBL-202ENST00000395540 2332 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
HIST1H2AGP0C0S8 HOXA9-201ENST00000343483 2060 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
HIST1H2AGP0C0S8 MMP23A-201ENST00000234610 1017 ntBASIC18.2■□□□□ 0.5
HIST1H2AGP0C0S8 PRR31-201ENST00000371629 978 ntTSL 2 BASIC18.2■□□□□ 0.5
HIST1H2AGP0C0S8 MIR564-202ENST00000385049 94 ntBASIC18.2■□□□□ 0.5
Retrieved 100 of 98,524 protein–RNA pairs in 23.9 ms