Protein–RNA interactions for Protein: P09326

CD48, CD48 antigen, humanhuman

Predictions only

Length 243 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD48P09326 CASKIN1-201ENST00000343516 5759 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
CD48P09326 AR-209ENST00000613054 3532 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
CD48P09326 ZDHHC14-203ENST00000359775 7380 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
CD48P09326 CACYBP-202ENST00000405362 1059 ntTSL 5 BASIC19.27■□□□□ 0.68
CD48P09326 CHCHD10-202ENST00000484558 1171 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
CD48P09326 KRT18P41-201ENST00000518924 1277 ntBASIC19.27■□□□□ 0.68
CD48P09326 AC136628.4-201ENST00000520758 535 ntTSL 2 BASIC19.27■□□□□ 0.68
CD48P09326 MVB12A-204ENST00000528515 686 ntTSL 5 BASIC19.27■□□□□ 0.68
CD48P09326 ARHGDIA-207ENST00000580685 1201 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
CD48P09326 CD209-209ENST00000601256 994 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
CD48P09326 ANKRD54-211ENST00000609454 825 ntTSL 3 BASIC19.27■□□□□ 0.68
CD48P09326 SPINK2-206ENST00000618802 608 ntTSL 3 BASIC19.27■□□□□ 0.68
CD48P09326 AC066615.1-201ENST00000640911 628 ntBASIC19.27■□□□□ 0.68
CD48P09326 SCARF1-202ENST00000348987 2619 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
CD48P09326 COL4A3BP-201ENST00000261415 2262 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
CD48P09326 CD276-201ENST00000318424 2738 ntTSL 5 BASIC19.27■□□□□ 0.67
CD48P09326 CKMT1A-202ENST00000413453 1911 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
CD48P09326 IAH1-202ENST00000470914 2137 ntTSL 1 (best) BASIC19.27■□□□□ 0.67
CD48P09326 UBE2QL1-201ENST00000399816 4317 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
CD48P09326 NUTM2F-202ENST00000341207 2516 ntAPPRIS ALT2 TSL 5 BASIC19.26■□□□□ 0.67
CD48P09326 NUTM2G-202ENST00000372322 2516 ntAPPRIS ALT2 TSL 5 BASIC19.26■□□□□ 0.67
CD48P09326 PDE9A-209ENST00000398227 1606 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
CD48P09326 MROH1-202ENST00000423230 1712 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
CD48P09326 PDE4A-202ENST00000344979 2579 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
CD48P09326 SLC35A3-217ENST00000639807 2767 ntTSL 5 BASIC19.26■□□□□ 0.67
CD48P09326 SOD2-206ENST00000452684 2045 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
CD48P09326 NDUFA12-201ENST00000327772 635 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
CD48P09326 NPM3-201ENST00000370110 877 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
CD48P09326 TSPAN14-205ENST00000372158 1095 ntAPPRIS P1 TSL 5 BASIC19.26■□□□□ 0.67
CD48P09326 MRPL53-202ENST00000409710 386 ntTSL 2 BASIC19.26■□□□□ 0.67
CD48P09326 AL050404.1-201ENST00000424566 802 ntTSL 2 BASIC19.26■□□□□ 0.67
CD48P09326 LINC01534-202ENST00000433232 554 ntTSL 3 BASIC19.26■□□□□ 0.67
CD48P09326 ANK1-211ENST00000522231 1060 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
CD48P09326 ANK1-212ENST00000522543 1160 ntTSL 2 BASIC19.26■□□□□ 0.67
CD48P09326 INO80E-207ENST00000563197 2103 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
CD48P09326 MIR3180-5-201ENST00000583743 153 ntBASIC19.26■□□□□ 0.67
CD48P09326 GRB10-201ENST00000335866 5032 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
CD48P09326 RXRB-202ENST00000374685 2846 ntAPPRIS ALT1 TSL 1 (best) BASIC19.26■□□□□ 0.67
CD48P09326 RBM26-207ENST00000622611 5230 ntTSL 2 BASIC19.26■□□□□ 0.67
CD48P09326 KCNIP4-205ENST00000382152 1767 ntTSL 5 BASIC19.26■□□□□ 0.67
CD48P09326 GAREM2-201ENST00000401533 4161 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
CD48P09326 GPT-202ENST00000394955 1885 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
CD48P09326 HARBI1-201ENST00000326737 1967 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
CD48P09326 IFFO1-202ENST00000356896 2680 ntTSL 5 BASIC19.26■□□□□ 0.67
CD48P09326 STX11-201ENST00000367568 1926 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
CD48P09326 HEXB-207ENST00000511181 2021 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
CD48P09326 AC107464.1-203ENST00000468356 2120 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
CD48P09326 RRN3-205ENST00000563559 2128 ntTSL 5 BASIC19.25■□□□□ 0.67
CD48P09326 STK25-203ENST00000403346 2210 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
CD48P09326 GPC2-201ENST00000292377 2532 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
CD48P09326 SLC35E4-201ENST00000343605 2714 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
CD48P09326 LYNX1-204ENST00000614491 4708 ntAPPRIS P1 TSL 2 BASIC19.25■□□□□ 0.67
CD48P09326 MTA1-207ENST00000435036 2888 ntTSL 5 BASIC19.25■□□□□ 0.67
CD48P09326 EMC8-201ENST00000253457 1962 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
CD48P09326 AC027097.1-202ENST00000592201 1954 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
CD48P09326 SLC26A11-212ENST00000572725 1862 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
CD48P09326 CYP2D7-201ENST00000358097 1655 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
CD48P09326 IGFBP7-AS1-201ENST00000499667 1389 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
CD48P09326 HAUS1-201ENST00000282058 1125 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
CD48P09326 AL731557.1-201ENST00000425264 744 ntTSL 3 BASIC19.25■□□□□ 0.67
CD48P09326 AC007663.1-201ENST00000438948 1240 ntBASIC19.25■□□□□ 0.67
CD48P09326 LINC00595-207ENST00000476909 792 ntTSL 2 BASIC19.25■□□□□ 0.67
CD48P09326 AC026412.1-201ENST00000507290 1033 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
CD48P09326 CAVIN3-203ENST00000530979 957 ntTSL 2 BASIC19.25■□□□□ 0.67
CD48P09326 RPS27A-211ENST00000639844 606 ntTSL 5 BASIC19.25■□□□□ 0.67
CD48P09326 MYC-208ENST00000641036 567 ntBASIC19.25■□□□□ 0.67
CD48P09326 TTC22-201ENST00000371274 2149 ntTSL 2 BASIC19.25■□□□□ 0.67
CD48P09326 PRSS23-209ENST00000533902 2043 ntTSL 4 BASIC19.25■□□□□ 0.67
CD48P09326 TCF25-225ENST00000614813 2047 ntTSL 5 BASIC19.25■□□□□ 0.67
CD48P09326 ZNF114-206ENST00000600687 1742 ntAPPRIS P1 TSL 5 BASIC19.25■□□□□ 0.67
CD48P09326 EFEMP2-210ENST00000528176 1504 ntTSL 5 BASIC19.25■□□□□ 0.67
CD48P09326 AC135776.1-201ENST00000319817 2481 ntBASIC19.25■□□□□ 0.67
CD48P09326 URI1-202ENST00000392271 3444 ntAPPRIS P3 TSL 1 (best) BASIC19.25■□□□□ 0.67
CD48P09326 KRT8P50-201ENST00000562022 1438 ntBASIC19.25■□□□□ 0.67
CD48P09326 LYSMD4-201ENST00000332728 2847 ntTSL 4 BASIC19.24■□□□□ 0.67
CD48P09326 KMT5B-201ENST00000304363 5837 ntAPPRIS P1 TSL 5 BASIC19.24■□□□□ 0.67
CD48P09326 ADAMTS16-203ENST00000511368 2682 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
CD48P09326 NUDT10-202ENST00000376006 2001 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
CD48P09326 KCNK4-205ENST00000538767 1389 ntTSL 2 BASIC19.24■□□□□ 0.67
CD48P09326 EGFL6-202ENST00000380602 2385 ntAPPRIS ALT2 TSL 1 (best) BASIC19.24■□□□□ 0.67
CD48P09326 VCY1B-201ENST00000250823 550 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
CD48P09326 VCY-201ENST00000250825 550 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
CD48P09326 TSPY17P-201ENST00000450329 467 ntBASIC19.24■□□□□ 0.67
CD48P09326 TAPBP-236ENST00000456592 817 ntTSL 5 BASIC19.24■□□□□ 0.67
CD48P09326 FAU-207ENST00000529639 847 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
CD48P09326 SLC39A2-203ENST00000554422 1259 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
CD48P09326 CFL2-205ENST00000555765 632 ntTSL 2 BASIC19.24■□□□□ 0.67
CD48P09326 CR769767.2-201ENST00000622735 460 ntBASIC19.24■□□□□ 0.67
CD48P09326 AC010947.1-201ENST00000623454 693 ntBASIC19.24■□□□□ 0.67
CD48P09326 SOST-201ENST00000301691 2300 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
CD48P09326 SYT8-202ENST00000381968 1424 ntAPPRIS P2 TSL 5 BASIC19.24■□□□□ 0.67
CD48P09326 GSTZ1-204ENST00000393734 1424 ntTSL 5 BASIC19.24■□□□□ 0.67
CD48P09326 TMEM110-MUSTN1-202ENST00000504329 1405 ntAPPRIS P1 TSL 5 BASIC19.24■□□□□ 0.67
CD48P09326 CSPG5-202ENST00000383738 4161 ntAPPRIS ALT2 TSL 1 (best) BASIC19.24■□□□□ 0.67
CD48P09326 GSDMD-201ENST00000262580 1762 ntAPPRIS P2 TSL 1 (best) BASIC19.24■□□□□ 0.67
CD48P09326 CDK10-202ENST00000353379 1798 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
CD48P09326 SLC39A3-202ENST00000455372 2940 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
CD48P09326 PTPRJ-202ENST00000440289 3158 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
CD48P09326 EHMT1-204ENST00000462484 2707 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
CD48P09326 CD164L2-202ENST00000374027 1457 ntAPPRIS P3 TSL 1 (best) BASIC19.23■□□□□ 0.67
Retrieved 100 of 98,524 protein–RNA pairs in 44.8 ms