Protein–RNA interactions for Protein: P07996

THBS1, Thrombospondin-1, humanhuman

Predictions only

Length 1,170 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
THBS1P07996 HPF1-201ENST00000393381 1230 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
THBS1P07996 ELP6-205ENST00000439305 880 ntTSL 2 BASIC17.11■□□□□ 0.33
THBS1P07996 FAM210CP-201ENST00000445714 574 ntBASIC17.11■□□□□ 0.33
THBS1P07996 MIR3180-5-201ENST00000583743 153 ntBASIC17.11■□□□□ 0.33
THBS1P07996 PRKACA-209ENST00000590853 1101 ntTSL 5 BASIC17.11■□□□□ 0.33
THBS1P07996 TNPO2-203ENST00000450764 4993 ntAPPRIS ALT1 TSL 1 (best) BASIC17.11■□□□□ 0.33
THBS1P07996 SAMD11-210ENST00000616016 2391 ntTSL 5 BASIC17.11■□□□□ 0.33
THBS1P07996 SAMD11-215ENST00000618779 2368 ntAPPRIS ALT2 TSL 5 BASIC17.11■□□□□ 0.33
THBS1P07996 TAL1-202ENST00000371884 4642 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
THBS1P07996 C16orf58-202ENST00000430477 2471 ntAPPRIS P2 TSL 1 (best) BASIC17.11■□□□□ 0.33
THBS1P07996 DLK1-202ENST00000341267 4722 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
THBS1P07996 ZNF274-212ENST00000617501 2538 ntAPPRIS P4 TSL 1 (best) BASIC17.11■□□□□ 0.33
THBS1P07996 EMC8-201ENST00000253457 1962 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
THBS1P07996 CNOT11-201ENST00000289382 2599 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
THBS1P07996 CENPA-202ENST00000335756 1452 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
THBS1P07996 ENDOV-225ENST00000522751 1475 ntTSL 5 BASIC17.11■□□□□ 0.33
THBS1P07996 INO80E-207ENST00000563197 2103 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
THBS1P07996 WNT5B-201ENST00000310594 2184 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
THBS1P07996 ATP5L-201ENST00000300688 1577 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
THBS1P07996 AMIGO1-202ENST00000369864 5088 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
THBS1P07996 MYC-207ENST00000621592 2366 ntAPPRIS ALT1 TSL 1 (best) BASIC17.1■□□□□ 0.33
THBS1P07996 PSPC1-201ENST00000338910 2407 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
THBS1P07996 AC063977.6-201ENST00000600074 1763 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
THBS1P07996 ANKS1A-201ENST00000360359 6347 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
THBS1P07996 AC020763.4-201ENST00000623414 4170 ntBASIC17.1■□□□□ 0.33
THBS1P07996 GTF2IRD2-207ENST00000625377 1910 ntTSL 5 BASIC17.1■□□□□ 0.33
THBS1P07996 RAPGEF5-203ENST00000405243 2800 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
THBS1P07996 KCNN4-209ENST00000615047 2029 ntTSL 5 BASIC17.1■□□□□ 0.33
THBS1P07996 AL390728.5-201ENST00000428687 706 ntTSL 3 BASIC17.1■□□□□ 0.33
THBS1P07996 TSPY7P-201ENST00000431358 1114 ntBASIC17.1■□□□□ 0.33
THBS1P07996 TSPY1-202ENST00000451548 1160 ntAPPRIS P5 TSL 1 (best) BASIC17.1■□□□□ 0.33
THBS1P07996 IAH1-202ENST00000470914 2137 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
THBS1P07996 SDR39U1-202ENST00000538105 1041 ntTSL 2 BASIC17.1■□□□□ 0.33
THBS1P07996 PRR14-202ENST00000300835 2198 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
THBS1P07996 KDM4B-202ENST00000381759 3058 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
THBS1P07996 NOC2LP1-202ENST00000452600 2235 ntBASIC17.1■□□□□ 0.33
THBS1P07996 SDK1-202ENST00000404826 10397 ntAPPRIS P2 TSL 1 (best) BASIC17.1■□□□□ 0.33
THBS1P07996 ADGRD2-201ENST00000334810 3244 ntAPPRIS P1 TSL 5 BASIC17.1■□□□□ 0.33
THBS1P07996 ZNF419-205ENST00000424930 2323 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
THBS1P07996 CCNC-207ENST00000518714 1426 ntTSL 5 BASIC17.1■□□□□ 0.33
THBS1P07996 STEAP1B-201ENST00000404369 1515 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
THBS1P07996 PDLIM7-203ENST00000359895 1567 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
THBS1P07996 CIRBP-202ENST00000413636 1606 ntTSL 2 BASIC17.1■□□□□ 0.33
THBS1P07996 PTPRK-218ENST00000525459 1722 ntTSL 2 BASIC17.1■□□□□ 0.33
THBS1P07996 AC087500.1-202ENST00000571689 1715 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
THBS1P07996 SLC35A3-224ENST00000640732 1777 ntTSL 5 BASIC17.1■□□□□ 0.33
THBS1P07996 UBE2Q2-208ENST00000569423 2969 ntTSL 2 BASIC17.1■□□□□ 0.33
THBS1P07996 RNF135-201ENST00000324689 1905 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
THBS1P07996 CTNNBL1-201ENST00000361383 1925 ntAPPRIS P2 TSL 1 (best) BASIC17.09■□□□□ 0.33
THBS1P07996 MAN1A1-201ENST00000368468 5014 ntAPPRIS P1 TSL 2 BASIC17.09■□□□□ 0.33
THBS1P07996 COL4A3BP-201ENST00000261415 2262 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
THBS1P07996 CRHR2-207ENST00000471646 2530 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
THBS1P07996 PJA1-202ENST00000374571 2672 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
THBS1P07996 PLEKHG5-207ENST00000400913 4698 ntAPPRIS P3 TSL 5 BASIC17.09■□□□□ 0.33
THBS1P07996 SSC4D-201ENST00000275560 2801 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
THBS1P07996 PCSK5-202ENST00000376767 2845 ntTSL 2 BASIC17.09■□□□□ 0.33
THBS1P07996 ZCCHC24-202ENST00000372336 4933 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
THBS1P07996 ANHX-202ENST00000545940 3452 ntAPPRIS P1 TSL 5 BASIC17.09■□□□□ 0.33
THBS1P07996 UNC93B2-201ENST00000285383 730 ntBASIC17.09■□□□□ 0.33
THBS1P07996 TPPP3-201ENST00000290942 1116 ntAPPRIS P1 TSL 2 BASIC17.09■□□□□ 0.33
THBS1P07996 HBA1-201ENST00000320868 577 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
THBS1P07996 TCTEX1D2-201ENST00000325318 673 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
THBS1P07996 TSPAN14-205ENST00000372158 1095 ntAPPRIS P1 TSL 5 BASIC17.09■□□□□ 0.33
THBS1P07996 TMSB4X-201ENST00000380633 495 ntAPPRIS P1 TSL 3 BASIC17.09■□□□□ 0.33
THBS1P07996 TPPP3-202ENST00000393957 1058 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
THBS1P07996 SLC25A1P2-201ENST00000430693 912 ntBASIC17.09■□□□□ 0.33
THBS1P07996 MIR4785-201ENST00000585005 73 ntBASIC17.09■□□□□ 0.33
THBS1P07996 AL158151.3-201ENST00000599172 696 ntTSL 5 BASIC17.09■□□□□ 0.33
THBS1P07996 LINC01023-201ENST00000606054 436 ntBASIC17.09■□□□□ 0.33
THBS1P07996 APIP-201ENST00000395787 1366 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
THBS1P07996 KCNK4-205ENST00000538767 1389 ntTSL 2 BASIC17.09■□□□□ 0.33
THBS1P07996 AL445686.2-201ENST00000577528 1445 ntTSL 3 BASIC17.09■□□□□ 0.33
THBS1P07996 SLC35A2-217ENST00000635589 1424 ntTSL 2 BASIC17.09■□□□□ 0.33
THBS1P07996 CDK10-202ENST00000353379 1798 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
THBS1P07996 LRRC27-201ENST00000344079 1809 ntAPPRIS ALT2 TSL 2 BASIC17.09■□□□□ 0.33
THBS1P07996 AC107464.1-203ENST00000468356 2120 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
THBS1P07996 PTTG1IP-203ENST00000397887 2413 ntTSL 4 BASIC17.09■□□□□ 0.33
THBS1P07996 AC008764.1-201ENST00000409035 2567 ntAPPRIS P1 TSL 2 BASIC17.09■□□□□ 0.33
THBS1P07996 CACTIN-201ENST00000221899 2797 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
THBS1P07996 STRN3-202ENST00000357479 2799 ntAPPRIS P1 TSL 5 BASIC17.09■□□□□ 0.33
THBS1P07996 TXNRD3-203ENST00000524230 2950 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
THBS1P07996 TMC5-203ENST00000396229 4917 ntAPPRIS ALT2 TSL 5 BASIC17.08■□□□□ 0.33
THBS1P07996 TP53BP2-201ENST00000343537 4651 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
THBS1P07996 ZNF839-202ENST00000442396 2987 ntAPPRIS P3 TSL 5 BASIC17.08■□□□□ 0.33
THBS1P07996 CD248-201ENST00000311330 2558 ntAPPRIS P1 BASIC17.08■□□□□ 0.33
THBS1P07996 PRKAR1B-212ENST00000544935 2494 ntAPPRIS P1 TSL 5 BASIC17.08■□□□□ 0.33
THBS1P07996 STMN3-202ENST00000540534 2351 ntTSL 2 BASIC17.08■□□□□ 0.33
THBS1P07996 DCST1-204ENST00000423025 2199 ntAPPRIS ALT2 TSL 2 BASIC17.08■□□□□ 0.33
THBS1P07996 CCDC43-201ENST00000315286 2082 ntAPPRIS P2 TSL 1 (best) BASIC17.08■□□□□ 0.33
THBS1P07996 SAYSD1-201ENST00000229903 2020 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
THBS1P07996 SLC39A5-201ENST00000266980 2031 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
THBS1P07996 RARRES1-201ENST00000237696 1952 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
THBS1P07996 MAPRE3-201ENST00000233121 1892 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
THBS1P07996 PCED1A-201ENST00000356872 1706 ntTSL 2 BASIC17.08■□□□□ 0.32
THBS1P07996 OSMR-202ENST00000502536 1740 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
THBS1P07996 STYXL1-208ENST00000451157 1570 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
THBS1P07996 SPATA6L-207ENST00000475086 1444 ntAPPRIS P1 TSL 2 BASIC17.08■□□□□ 0.32
THBS1P07996 KRT17P2-202ENST00000326333 1174 ntTSL 2 BASIC17.08■□□□□ 0.32
THBS1P07996 MRPL54-201ENST00000330133 626 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
THBS1P07996 CDHR4-201ENST00000343366 1188 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
Retrieved 100 of 98,524 protein–RNA pairs in 20.9 ms