Protein–RNA interactions for Protein: O95749

GGPS1, Geranylgeranyl pyrophosphate synthase, humanhuman

Predictions only

Length 300 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GGPS1O95749 CENPX-201ENST00000306704 751 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
GGPS1O95749 KCNK7-202ENST00000342202 1283 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
GGPS1O95749 SPATA22-202ENST00000355380 1216 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
GGPS1O95749 MRPL43-205ENST00000370234 798 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
GGPS1O95749 AC079031.1-201ENST00000542627 1035 ntTSL 3 BASIC20.84■□□□□ 0.93
GGPS1O95749 LINC01582-202ENST00000561215 452 ntTSL 4 BASIC20.84■□□□□ 0.93
GGPS1O95749 AC009084.1-201ENST00000566869 317 ntTSL 5 BASIC20.84■□□□□ 0.93
GGPS1O95749 PLEKHM2-202ENST00000375799 4122 ntAPPRIS P2 TSL 1 (best) BASIC20.84■□□□□ 0.93
GGPS1O95749 WDR45-205ENST00000376358 1432 ntTSL 2 BASIC20.84■□□□□ 0.93
GGPS1O95749 SCYL2-201ENST00000360820 5779 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
GGPS1O95749 YTHDC2-207ENST00000515883 2629 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
GGPS1O95749 NOP56-201ENST00000329276 2400 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
GGPS1O95749 PACRGL-203ENST00000444671 1720 ntTSL 2 BASIC20.84■□□□□ 0.93
GGPS1O95749 MTMR9LP-203ENST00000426597 1545 ntBASIC20.83■□□□□ 0.93
GGPS1O95749 TMSB15B-201ENST00000419165 1666 ntAPPRIS P1 TSL 2 BASIC20.83■□□□□ 0.93
GGPS1O95749 NFYC-AS1-201ENST00000606277 1687 ntBASIC20.83■□□□□ 0.93
GGPS1O95749 ISLR2-208ENST00000565159 2824 ntAPPRIS P1 TSL 3 BASIC20.83■□□□□ 0.93
GGPS1O95749 VPS37D-202ENST00000451519 1303 ntTSL 5 BASIC20.83■□□□□ 0.93
GGPS1O95749 EEF1AKMT2-201ENST00000368836 1462 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
GGPS1O95749 GFI1-201ENST00000294702 2784 ntAPPRIS P1 TSL 2 BASIC20.83■□□□□ 0.93
GGPS1O95749 DDX59-201ENST00000331314 2289 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
GGPS1O95749 AL049812.1-201ENST00000432563 2267 ntBASIC20.83■□□□□ 0.93
GGPS1O95749 AC011944.1-201ENST00000316148 1900 ntTSL 2 BASIC20.83■□□□□ 0.93
GGPS1O95749 AC044802.1-201ENST00000501143 2894 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
GGPS1O95749 LINC01128-207ENST00000449005 874 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
GGPS1O95749 AC079385.1-201ENST00000551505 570 ntTSL 4 BASIC20.83■□□□□ 0.93
GGPS1O95749 AP002414.4-201ENST00000589764 1148 ntBASIC20.83■□□□□ 0.93
GGPS1O95749 REXO2-220ENST00000611665 1158 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
GGPS1O95749 CLN3-259ENST00000637551 1083 ntTSL 5 BASIC20.83■□□□□ 0.93
GGPS1O95749 ERVK13-1-203ENST00000564340 1449 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
GGPS1O95749 SNAI3-201ENST00000332281 1732 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
GGPS1O95749 C7orf49-202ENST00000424142 1738 ntTSL 2 BASIC20.83■□□□□ 0.92
GGPS1O95749 NSMF-201ENST00000265663 2981 ntAPPRIS P3 TSL 1 (best) BASIC20.83■□□□□ 0.92
GGPS1O95749 NSMF-206ENST00000371475 2987 ntAPPRIS ALT1 TSL 1 (best) BASIC20.83■□□□□ 0.92
GGPS1O95749 NFIX-202ENST00000360105 5459 ntTSL 5 BASIC20.83■□□□□ 0.92
GGPS1O95749 LAPTM4B-204ENST00000619747 2758 ntTSL 1 (best) BASIC20.83■□□□□ 0.92
GGPS1O95749 TMEM8A-204ENST00000431232 3691 ntAPPRIS P2 TSL 1 (best) BASIC20.83■□□□□ 0.92
GGPS1O95749 CLEC4G-201ENST00000328853 1360 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
GGPS1O95749 AC073107.1-201ENST00000633579 1962 ntTSL 5 BASIC20.83■□□□□ 0.92
GGPS1O95749 FAM213B-204ENST00000419916 2749 ntAPPRIS P3 TSL 1 (best) BASIC20.83■□□□□ 0.92
GGPS1O95749 RMND5A-201ENST00000283632 6301 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
GGPS1O95749 KMT5B-203ENST00000401547 2666 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
GGPS1O95749 KCNIP4-205ENST00000382152 1767 ntTSL 5 BASIC20.82■□□□□ 0.92
GGPS1O95749 WFDC1-203ENST00000568638 1319 ntAPPRIS P1 TSL 2 BASIC20.82■□□□□ 0.92
GGPS1O95749 AP003356.1-202ENST00000517910 2770 ntTSL 2 BASIC20.82■□□□□ 0.92
GGPS1O95749 BRAF-201ENST00000288602 2480 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
GGPS1O95749 ATPIF1-202ENST00000465645 1855 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
GGPS1O95749 RELB-201ENST00000221452 2294 ntAPPRIS P2 TSL 1 (best) BASIC20.82■□□□□ 0.92
GGPS1O95749 TRIM47-201ENST00000254816 2266 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
GGPS1O95749 CPZ-202ENST00000360986 2267 ntAPPRIS ALT2 TSL 1 (best) BASIC20.82■□□□□ 0.92
GGPS1O95749 ATP6V0C-201ENST00000330398 1175 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
GGPS1O95749 PARK7-201ENST00000338639 949 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
GGPS1O95749 ISG15-201ENST00000379389 711 ntAPPRIS P2 TSL 1 (best) BASIC20.82■□□□□ 0.92
GGPS1O95749 TTC3-203ENST00000399010 2115 ntTSL 5 BASIC20.82■□□□□ 0.92
GGPS1O95749 CHCHD2P8-201ENST00000429873 447 ntBASIC20.82■□□□□ 0.92
GGPS1O95749 ZNF346-205ENST00000506693 1276 ntTSL 2 BASIC20.82■□□□□ 0.92
GGPS1O95749 AC026471.3-201ENST00000565137 578 ntTSL 2 BASIC20.82■□□□□ 0.92
GGPS1O95749 TNNT1-204ENST00000585321 995 ntAPPRIS ALT2 TSL 5 BASIC20.82■□□□□ 0.92
GGPS1O95749 BCL11A-209ENST00000489516 1508 ntTSL 5 BASIC20.82■□□□□ 0.92
GGPS1O95749 INTS11-249ENST00000618806 1523 ntTSL 2 BASIC20.82■□□□□ 0.92
GGPS1O95749 TULP1-208ENST00000614066 2084 ntAPPRIS ALT2 TSL 5 BASIC20.82■□□□□ 0.92
GGPS1O95749 DTNBP1-203ENST00000355917 1359 ntTSL 5 BASIC20.82■□□□□ 0.92
GGPS1O95749 AKR1A1-214ENST00000621846 1360 ntAPPRIS P1 TSL 5 BASIC20.82■□□□□ 0.92
GGPS1O95749 CAPS-201ENST00000452990 1789 ntTSL 5 BASIC20.82■□□□□ 0.92
GGPS1O95749 SLC16A3-221ENST00000617373 2048 ntAPPRIS P1 TSL 5 BASIC20.82■□□□□ 0.92
GGPS1O95749 SLC16A3-222ENST00000619321 2015 ntAPPRIS P1 TSL 5 BASIC20.82■□□□□ 0.92
GGPS1O95749 TRIM36-202ENST00000379617 1322 ntTSL 2 BASIC20.81■□□□□ 0.92
GGPS1O95749 NEK2-205ENST00000540251 1318 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
GGPS1O95749 LRRC1-202ENST00000370888 3180 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
GGPS1O95749 SLC47A1-202ENST00000395585 1998 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
GGPS1O95749 HDAC11-221ENST00000522202 1559 ntAPPRIS ALT2 TSL 2 BASIC20.81■□□□□ 0.92
GGPS1O95749 TRA2A-201ENST00000297071 1845 ntAPPRIS P3 TSL 1 (best) BASIC20.81■□□□□ 0.92
GGPS1O95749 ARAP1-AS2-201ENST00000500163 1824 ntTSL 2 BASIC20.81■□□□□ 0.92
GGPS1O95749 CAPZB-202ENST00000264203 2068 ntTSL 2 BASIC20.81■□□□□ 0.92
GGPS1O95749 PRR14-203ENST00000542965 2316 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
GGPS1O95749 LSM11-201ENST00000286307 6584 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
GGPS1O95749 ARID4B-203ENST00000366603 5946 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
GGPS1O95749 TRIP6-201ENST00000200457 1942 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
GGPS1O95749 SLC50A1-201ENST00000303343 1137 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
GGPS1O95749 TBPL1-203ENST00000367871 808 ntTSL 2 BASIC20.81■□□□□ 0.92
GGPS1O95749 SSR4P1-202ENST00000429427 967 ntTSL 5 BASIC20.81■□□□□ 0.92
GGPS1O95749 AC125616.1-201ENST00000540369 1015 ntTSL 3 BASIC20.81■□□□□ 0.92
GGPS1O95749 MIR3652-201ENST00000579335 131 ntBASIC20.81■□□□□ 0.92
GGPS1O95749 BIRC5-207ENST00000590449 568 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
GGPS1O95749 PLCB2-204ENST00000557821 4517 ntAPPRIS ALT1 TSL 1 (best) BASIC20.81■□□□□ 0.92
GGPS1O95749 GLYCTK-201ENST00000305690 1371 ntTSL 5 BASIC20.81■□□□□ 0.92
GGPS1O95749 ARMC6-202ENST00000392335 2383 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
GGPS1O95749 PDZD3-203ENST00000525131 1882 ntTSL 2 BASIC20.81■□□□□ 0.92
GGPS1O95749 Z83836.1-201ENST00000624605 1642 ntBASIC20.81■□□□□ 0.92
GGPS1O95749 KMT2B-201ENST00000420124 8469 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
GGPS1O95749 TAPT1-201ENST00000405303 4591 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
GGPS1O95749 MRPS7-204ENST00000579761 1717 ntTSL 2 BASIC20.81■□□□□ 0.92
GGPS1O95749 BRSK1-201ENST00000309383 3079 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
GGPS1O95749 FAM109B-201ENST00000321753 2335 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
GGPS1O95749 AC098818.2-201ENST00000564925 2320 ntBASIC20.81■□□□□ 0.92
GGPS1O95749 PRKRA-203ENST00000432031 1344 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
GGPS1O95749 DIO3OS-212ENST00000557661 1937 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
GGPS1O95749 AC138696.1-201ENST00000522452 2897 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
GGPS1O95749 LYPD3-201ENST00000244333 1694 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
GGPS1O95749 ARFRP1-207ENST00000612157 1698 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
Retrieved 100 of 98,524 protein–RNA pairs in 24 ms