Protein–RNA interactions for Protein: O95197

RTN3, Reticulon-3, humanhuman

Predicted RBP Predictions only

Length 1,032 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTN3O95197 FGFR2-204ENST00000356226 3547 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
RTN3O95197 NOS1AP-206ENST00000530878 2894 ntAPPRIS ALT2 TSL 1 (best) BASIC19.57■□□□□ 0.72
RTN3O95197 PTTG1IP-204ENST00000445724 2497 ntTSL 2 BASIC19.57■□□□□ 0.72
RTN3O95197 FAM182B-201ENST00000376403 1681 ntAPPRIS P5 TSL 1 (best) BASIC19.57■□□□□ 0.72
RTN3O95197 CD1E-211ENST00000368166 1271 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
RTN3O95197 ISCU-202ENST00000392807 1069 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
RTN3O95197 ISCU-203ENST00000431221 799 ntTSL 2 BASIC19.57■□□□□ 0.72
RTN3O95197 LY6E-213ENST00000522528 606 ntTSL 3 BASIC19.57■□□□□ 0.72
RTN3O95197 AC127526.4-201ENST00000527970 983 ntTSL 3 BASIC19.57■□□□□ 0.72
RTN3O95197 AKTIP-212ENST00000570004 1162 ntAPPRIS P3 TSL 1 (best) BASIC19.57■□□□□ 0.72
RTN3O95197 AC091076.1-201ENST00000610741 619 ntBASIC19.57■□□□□ 0.72
RTN3O95197 EXOSC3-201ENST00000327304 1806 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
RTN3O95197 CHTOP-207ENST00000614256 1840 ntTSL 3 BASIC19.57■□□□□ 0.72
RTN3O95197 SLC6A11-202ENST00000454147 2794 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
RTN3O95197 KLHL2-201ENST00000226725 3134 ntAPPRIS P3 TSL 1 (best) BASIC19.57■□□□□ 0.72
RTN3O95197 TULP1-201ENST00000229771 2162 ntAPPRIS P2 TSL 1 (best) BASIC19.57■□□□□ 0.72
RTN3O95197 SCD5-201ENST00000273908 1995 ntTSL 2 BASIC19.57■□□□□ 0.72
RTN3O95197 ACBD4-207ENST00000586346 1579 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
RTN3O95197 CRELD2-201ENST00000328268 1357 ntAPPRIS P3 TSL 1 (best) BASIC19.57■□□□□ 0.72
RTN3O95197 SPAG16-204ENST00000413312 2258 ntTSL 5 BASIC19.56■□□□□ 0.72
RTN3O95197 AP3S1-201ENST00000316788 1730 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
RTN3O95197 TOX2-205ENST00000423191 1709 ntTSL 2 BASIC19.56■□□□□ 0.72
RTN3O95197 CD19-206ENST00000567541 1707 ntAPPRIS ALT2 TSL 1 (best) BASIC19.56■□□□□ 0.72
RTN3O95197 GNA12-201ENST00000275364 4378 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
RTN3O95197 PRR23B-201ENST00000329447 1896 ntAPPRIS P1 BASIC19.56■□□□□ 0.72
RTN3O95197 WBP2-219ENST00000626827 1867 ntTSL 5 BASIC19.56■□□□□ 0.72
RTN3O95197 ZBED3-AS1-208ENST00000512001 1668 ntTSL 3 BASIC19.56■□□□□ 0.72
RTN3O95197 CNNM3-201ENST00000305510 3447 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
RTN3O95197 CYB561D2-201ENST00000232508 1225 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
RTN3O95197 MRPL24-202ENST00000368211 883 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
RTN3O95197 PTGDS-202ENST00000371625 807 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
RTN3O95197 DGUOK-AS1-203ENST00000453103 601 ntTSL 3 BASIC19.56■□□□□ 0.72
RTN3O95197 C7orf49-209ENST00000483029 596 ntTSL 2 BASIC19.56■□□□□ 0.72
RTN3O95197 SSSCA1-206ENST00000531405 879 ntTSL 2 BASIC19.56■□□□□ 0.72
RTN3O95197 CD320-202ENST00000537716 1119 ntTSL 2 BASIC19.56■□□□□ 0.72
RTN3O95197 AC104390.1-201ENST00000555663 520 ntBASIC19.56■□□□□ 0.72
RTN3O95197 FGF14-AS2-201ENST00000606448 1074 ntBASIC19.56■□□□□ 0.72
RTN3O95197 AC083906.6-201ENST00000641366 219 ntBASIC19.56■□□□□ 0.72
RTN3O95197 NEFHP1-201ENST00000412845 2629 ntBASIC19.56■□□□□ 0.72
RTN3O95197 AC004408.2-201ENST00000623613 2777 ntBASIC19.56■□□□□ 0.72
RTN3O95197 PFDN6-206ENST00000463584 1915 ntTSL 3 BASIC19.56■□□□□ 0.72
RTN3O95197 C11orf80-214ENST00000532565 1948 ntAPPRIS ALT2 TSL 5 BASIC19.56■□□□□ 0.72
RTN3O95197 TPCN2-201ENST00000294309 2931 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
RTN3O95197 NOC2LP1-202ENST00000452600 2235 ntBASIC19.56■□□□□ 0.72
RTN3O95197 PCED1A-201ENST00000356872 1706 ntTSL 2 BASIC19.56■□□□□ 0.72
RTN3O95197 UTP18-201ENST00000225298 1894 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
RTN3O95197 PDE9A-206ENST00000380328 1875 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
RTN3O95197 NUDT10-202ENST00000376006 2001 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
RTN3O95197 ASMTL-201ENST00000381317 2027 ntAPPRIS P3 TSL 1 (best) BASIC19.56■□□□□ 0.72
RTN3O95197 KCNH1-214ENST00000640566 1365 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
RTN3O95197 PODXL2-201ENST00000342480 2186 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
RTN3O95197 SMPD1-203ENST00000527275 2188 ntAPPRIS P3 TSL 2 BASIC19.56■□□□□ 0.72
RTN3O95197 BRAF-201ENST00000288602 2480 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
RTN3O95197 TRMT2A-203ENST00000404751 2498 ntAPPRIS ALT2 TSL 2 BASIC19.56■□□□□ 0.72
RTN3O95197 CCT5-214ENST00000515676 1997 ntTSL 2 BASIC19.55■□□□□ 0.72
RTN3O95197 NDRG2-227ENST00000554143 1980 ntAPPRIS ALT1 TSL 2 BASIC19.55■□□□□ 0.72
RTN3O95197 PTGES2-AS1-201ENST00000443493 2100 ntBASIC19.55■□□□□ 0.72
RTN3O95197 SGO1-209ENST00000442720 2266 ntAPPRIS ALT2 TSL 1 (best) BASIC19.55■□□□□ 0.72
RTN3O95197 SMPD3-201ENST00000219334 5453 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
RTN3O95197 NFATC1-201ENST00000253506 4642 ntAPPRIS P3 TSL 1 (best) BASIC19.55■□□□□ 0.72
RTN3O95197 C7orf49-202ENST00000424142 1738 ntTSL 2 BASIC19.55■□□□□ 0.72
RTN3O95197 LINC01311-201ENST00000565162 1445 ntBASIC19.55■□□□□ 0.72
RTN3O95197 MIR3917-201ENST00000580971 93 ntBASIC19.55■□□□□ 0.72
RTN3O95197 C16orf74-203ENST00000602675 744 ntAPPRIS ALT2 TSL 1 (best) BASIC19.55■□□□□ 0.72
RTN3O95197 C16orf74-206ENST00000602766 832 ntAPPRIS ALT2 TSL 3 BASIC19.55■□□□□ 0.72
RTN3O95197 RNASET2-213ENST00000611959 1124 ntTSL 5 BASIC19.55■□□□□ 0.72
RTN3O95197 PSPC1-206ENST00000619300 2013 ntAPPRIS P1 TSL 5 BASIC19.55■□□□□ 0.72
RTN3O95197 HYMAI.1-201ENST00000620949 238 ntBASIC19.55■□□□□ 0.72
RTN3O95197 DFFB-212ENST00000625756 649 ntTSL 5 BASIC19.55■□□□□ 0.72
RTN3O95197 NDUFAB1-201ENST00000007516 717 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
RTN3O95197 MARK4-210ENST00000620044 2105 ntTSL 5 BASIC19.55■□□□□ 0.72
RTN3O95197 IP6K1-204ENST00000468463 1815 ntTSL 5 BASIC19.55■□□□□ 0.72
RTN3O95197 INTS11-249ENST00000618806 1523 ntTSL 2 BASIC19.55■□□□□ 0.72
RTN3O95197 ZNF324B-202ENST00000545523 2368 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
RTN3O95197 AC006333.2-201ENST00000607957 2099 ntBASIC19.55■□□□□ 0.72
RTN3O95197 ZNF12-201ENST00000342651 2921 ntAPPRIS ALT2 TSL 2 BASIC19.55■□□□□ 0.72
RTN3O95197 AC011944.1-201ENST00000316148 1900 ntTSL 2 BASIC19.55■□□□□ 0.72
RTN3O95197 CTNNBL1-201ENST00000361383 1925 ntAPPRIS P2 TSL 1 (best) BASIC19.55■□□□□ 0.72
RTN3O95197 PTPRE-201ENST00000254667 5331 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
RTN3O95197 SNX11-201ENST00000359238 2315 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
RTN3O95197 KLC2-204ENST00000394067 2898 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
RTN3O95197 CPZ-202ENST00000360986 2267 ntAPPRIS ALT2 TSL 1 (best) BASIC19.54■□□□□ 0.72
RTN3O95197 ATP6V1G2-205ENST00000303892 1588 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
RTN3O95197 TMEM259-209ENST00000592590 2509 ntTSL 5 BASIC19.54■□□□□ 0.72
RTN3O95197 NFIB-208ENST00000397581 3318 ntTSL 5 BASIC19.54■□□□□ 0.72
RTN3O95197 AURKA-202ENST00000347343 2248 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
RTN3O95197 FAM86EP-206ENST00000510506 987 ntBASIC19.54■□□□□ 0.72
RTN3O95197 MFGE8-203ENST00000542878 1172 ntTSL 2 BASIC19.54■□□□□ 0.72
RTN3O95197 PRTN3-202ENST00000544537 1036 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
RTN3O95197 C14orf144-201ENST00000553757 537 ntTSL 4 BASIC19.54■□□□□ 0.72
RTN3O95197 ZNF444P1-201ENST00000559497 298 ntBASIC19.54■□□□□ 0.72
RTN3O95197 SLF2-205ENST00000609386 891 ntAPPRIS ALT2 BASIC19.54■□□□□ 0.72
RTN3O95197 DHRS2-210ENST00000611765 1287 ntAPPRIS ALT2 TSL 2 BASIC19.54■□□□□ 0.72
RTN3O95197 AL358472.4-201ENST00000633140 710 ntBASIC19.54■□□□□ 0.72
RTN3O95197 SMIM29-209ENST00000636500 1186 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
RTN3O95197 SEMA3B-202ENST00000418576 1765 ntTSL 2 BASIC19.54■□□□□ 0.72
RTN3O95197 AR-207ENST00000612010 3896 ntTSL 5 BASIC19.54■□□□□ 0.72
RTN3O95197 RNF113B-201ENST00000267291 1376 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
RTN3O95197 TNXA-203ENST00000507684 2038 ntBASIC19.54■□□□□ 0.72
RTN3O95197 CMIP-209ENST00000566513 2288 ntTSL 5 BASIC19.54■□□□□ 0.72
Retrieved 100 of 98,524 protein–RNA pairs in 24.1 ms