Protein–RNA interactions for Protein: O60931

CTNS, Cystinosin, humanhuman

Predictions only

Length 367 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTNSO60931 DMKN-208ENST00000424570 1293 ntAPPRIS ALT2 TSL 1 (best) BASIC17.41■□□□□ 0.38
CTNSO60931 TSPY5P-201ENST00000426936 936 ntBASIC17.41■□□□□ 0.38
CTNSO60931 NDUFA13-201ENST00000428459 576 ntTSL 2 BASIC17.41■□□□□ 0.38
CTNSO60931 AC012618.3-202ENST00000440004 472 ntTSL 4 BASIC17.41■□□□□ 0.38
CTNSO60931 AL136307.1-201ENST00000454882 411 ntTSL 2 BASIC17.41■□□□□ 0.38
CTNSO60931 SEC1P-202ENST00000473944 940 ntBASIC17.41■□□□□ 0.38
CTNSO60931 DRAP1-205ENST00000527119 581 ntTSL 5 BASIC17.41■□□□□ 0.38
CTNSO60931 AL441883.1-201ENST00000566170 1045 ntBASIC17.41■□□□□ 0.38
CTNSO60931 MIR3180-4-201ENST00000582223 153 ntBASIC17.41■□□□□ 0.38
CTNSO60931 MAP3K14-AS1-202ENST00000585351 893 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
CTNSO60931 NAT14-202ENST00000587400 416 ntTSL 5 BASIC17.41■□□□□ 0.38
CTNSO60931 EDC3-214ENST00000568176 1825 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
CTNSO60931 SNX17-201ENST00000233575 2044 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
CTNSO60931 MYOZ3-203ENST00000517768 1451 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
CTNSO60931 ENDOV-225ENST00000522751 1475 ntTSL 5 BASIC17.41■□□□□ 0.38
CTNSO60931 ENTPD8-202ENST00000371506 2222 ntAPPRIS P1 TSL 5 BASIC17.41■□□□□ 0.38
CTNSO60931 P2RY6-212ENST00000618468 2431 ntAPPRIS P1 TSL 3 BASIC17.41■□□□□ 0.38
CTNSO60931 WFDC1-203ENST00000568638 1319 ntAPPRIS P1 TSL 2 BASIC17.41■□□□□ 0.38
CTNSO60931 NTRK1-201ENST00000358660 2492 ntAPPRIS ALT2 TSL 2 BASIC17.41■□□□□ 0.38
CTNSO60931 EGFL7-204ENST00000406555 1529 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
CTNSO60931 CPNE7-201ENST00000268720 2657 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
CTNSO60931 HOXC10-201ENST00000303460 1936 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
CTNSO60931 ANHX-202ENST00000545940 3452 ntAPPRIS P1 TSL 5 BASIC17.41■□□□□ 0.38
CTNSO60931 NFIB-208ENST00000397581 3318 ntTSL 5 BASIC17.41■□□□□ 0.38
CTNSO60931 MYLKP1-201ENST00000509077 1580 ntBASIC17.4■□□□□ 0.38
CTNSO60931 SARAF-214ENST00000545648 1976 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
CTNSO60931 ASB6-202ENST00000277459 2180 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
CTNSO60931 ZKSCAN7-205ENST00000426540 2791 ntAPPRIS P1 TSL 2 BASIC17.4■□□□□ 0.38
CTNSO60931 ENOPH1-201ENST00000273920 2025 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
CTNSO60931 OSR2-201ENST00000297565 1838 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
CTNSO60931 MCRS1-202ENST00000357123 1428 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
CTNSO60931 CNOT6-201ENST00000261951 6176 ntAPPRIS P1 TSL 5 BASIC17.4■□□□□ 0.38
CTNSO60931 TBX20-201ENST00000408931 1871 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
CTNSO60931 SLC26A11-212ENST00000572725 1862 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
CTNSO60931 ANXA3-201ENST00000264908 1657 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
CTNSO60931 OGFOD3-202ENST00000329197 1652 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
CTNSO60931 IL4I1-201ENST00000341114 2349 ntAPPRIS P4 TSL 1 (best) BASIC17.4■□□□□ 0.38
CTNSO60931 AC007731.5-201ENST00000429594 644 ntAPPRIS P1 TSL 5 BASIC17.4■□□□□ 0.38
CTNSO60931 ZNF706-204ENST00000518336 501 ntAPPRIS P1 TSL 4 BASIC17.4■□□□□ 0.38
CTNSO60931 C12orf43-206ENST00000537817 1270 ntAPPRIS ALT2 TSL 1 (best) BASIC17.4■□□□□ 0.38
CTNSO60931 AC021739.3-201ENST00000557908 855 ntTSL 2 BASIC17.4■□□□□ 0.38
CTNSO60931 CENPS-CORT-205ENST00000602787 571 ntAPPRIS P1 TSL 3 BASIC17.4■□□□□ 0.38
CTNSO60931 ISOC2-201ENST00000085068 1122 ntTSL 2 BASIC17.4■□□□□ 0.38
CTNSO60931 PRRT1-201ENST00000211413 1909 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
CTNSO60931 SMARCD1-201ENST00000381513 3237 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
CTNSO60931 FIP1L1-202ENST00000337488 2198 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
CTNSO60931 FIP1L1-203ENST00000358575 2180 ntAPPRIS P4 TSL 2 BASIC17.4■□□□□ 0.38
CTNSO60931 SEMA3B-202ENST00000418576 1765 ntTSL 2 BASIC17.4■□□□□ 0.38
CTNSO60931 TFAP4-201ENST00000204517 2215 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
CTNSO60931 SMARCC2-201ENST00000267064 4076 ntAPPRIS P4 TSL 1 (best) BASIC17.4■□□□□ 0.38
CTNSO60931 C6orf223-202ENST00000439969 2757 ntTSL 2 BASIC17.4■□□□□ 0.38
CTNSO60931 ARRB1-201ENST00000360025 1895 ntAPPRIS P3 TSL 1 (best) BASIC17.39■□□□□ 0.38
CTNSO60931 GTF2H4-202ENST00000376316 1673 ntAPPRIS P1 TSL 5 BASIC17.39■□□□□ 0.37
CTNSO60931 SLC6A9-201ENST00000357730 2168 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
CTNSO60931 AL499627.1-201ENST00000569373 2188 ntBASIC17.39■□□□□ 0.37
CTNSO60931 DGKI-202ENST00000424189 4163 ntAPPRIS ALT2 TSL 5 BASIC17.39■□□□□ 0.37
CTNSO60931 RNF167-205ENST00000571816 1728 ntAPPRIS P3 TSL 5 BASIC17.39■□□□□ 0.37
CTNSO60931 SLC1A6-210ENST00000600144 1735 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
CTNSO60931 MBD3-207ENST00000590550 2782 ntTSL 2 BASIC17.39■□□□□ 0.37
CTNSO60931 CACNA1A-246ENST00000637736 8340 ntAPPRIS ALT2 TSL 5 BASIC17.39■□□□□ 0.37
CTNSO60931 MRAS-204ENST00000464896 1534 ntTSL 2 BASIC17.39■□□□□ 0.37
CTNSO60931 MYO15B-232ENST00000610510 9195 ntAPPRIS P1 TSL 5 BASIC17.39■□□□□ 0.37
CTNSO60931 AC003075.1-204ENST00000433005 540 ntTSL 2 BASIC17.39■□□□□ 0.37
CTNSO60931 LINC00595-207ENST00000476909 792 ntTSL 2 BASIC17.39■□□□□ 0.37
CTNSO60931 ZNF706-206ENST00000519744 785 ntTSL 3 BASIC17.39■□□□□ 0.37
CTNSO60931 CD81-212ENST00000526072 1172 ntTSL 5 BASIC17.39■□□□□ 0.37
CTNSO60931 C14orf144-201ENST00000553757 537 ntTSL 4 BASIC17.39■□□□□ 0.37
CTNSO60931 CENPX-206ENST00000580435 710 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
CTNSO60931 FAM104A-205ENST00000581110 512 ntTSL 2 BASIC17.39■□□□□ 0.37
CTNSO60931 C17orf62-221ENST00000581196 668 ntTSL 4 BASIC17.39■□□□□ 0.37
CTNSO60931 ZNF534-205ENST00000617900 1085 ntTSL 2 BASIC17.39■□□□□ 0.37
CTNSO60931 TRPC1-203ENST00000476941 3061 ntAPPRIS ALT2 TSL 1 (best) BASIC17.39■□□□□ 0.37
CTNSO60931 FBXL18-205ENST00000620087 2076 ntTSL 5 BASIC17.39■□□□□ 0.37
CTNSO60931 MAGED2-213ENST00000627068 1811 ntAPPRIS ALT2 TSL 5 BASIC17.39■□□□□ 0.37
CTNSO60931 CERS5-203ENST00000422340 2855 ntAPPRIS ALT2 TSL 2 BASIC17.39■□□□□ 0.37
CTNSO60931 ACSS3-201ENST00000261206 2666 ntAPPRIS ALT1 TSL 1 (best) BASIC17.39■□□□□ 0.37
CTNSO60931 PSTPIP1-203ENST00000558012 1896 ntAPPRIS P2 TSL 1 (best) BASIC17.39■□□□□ 0.37
CTNSO60931 SAMD11-216ENST00000620200 1874 ntTSL 5 BASIC17.39■□□□□ 0.37
CTNSO60931 RFTN1-201ENST00000334133 2982 ntAPPRIS P2 TSL 1 (best) BASIC17.39■□□□□ 0.37
CTNSO60931 PSMD3-201ENST00000264639 2158 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
CTNSO60931 NPR3-204ENST00000434067 2715 ntTSL 5 BASIC17.39■□□□□ 0.37
CTNSO60931 ARHGEF18-202ENST00000359920 5733 ntAPPRIS ALT2 TSL 2 BASIC17.39■□□□□ 0.37
CTNSO60931 SAMD14-203ENST00000503131 1938 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
CTNSO60931 LTBP3-217ENST00000530785 2461 ntTSL 2 BASIC17.39■□□□□ 0.37
CTNSO60931 SCAND1-203ENST00000615116 1371 ntAPPRIS P1 TSL 5 BASIC17.39■□□□□ 0.37
CTNSO60931 SEMA3B-210ENST00000611067 2292 ntAPPRIS ALT2 TSL 1 (best) BASIC17.38■□□□□ 0.37
CTNSO60931 AGO3-202ENST00000324350 1726 ntTSL 2 BASIC17.38■□□□□ 0.37
CTNSO60931 NPLOC4-201ENST00000331134 4415 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
CTNSO60931 BPTF-201ENST00000306378 9688 ntAPPRIS P2 TSL 1 (best) BASIC17.38■□□□□ 0.37
CTNSO60931 AL138781.2-201ENST00000617896 1843 ntBASIC17.38■□□□□ 0.37
CTNSO60931 L3HYPDH-201ENST00000247194 1527 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
CTNSO60931 TMEM176A-210ENST00000484928 1530 ntAPPRIS P2 TSL 5 BASIC17.38■□□□□ 0.37
CTNSO60931 TULP1-201ENST00000229771 2162 ntAPPRIS P2 TSL 1 (best) BASIC17.38■□□□□ 0.37
CTNSO60931 TP53BP2-201ENST00000343537 4651 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
CTNSO60931 KLK14-201ENST00000156499 1060 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
CTNSO60931 PAX3-201ENST00000258387 958 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
CTNSO60931 HRAS-201ENST00000311189 894 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
CTNSO60931 C6orf48-206ENST00000375641 602 ntAPPRIS P1 TSL 2 BASIC17.38■□□□□ 0.37
CTNSO60931 SYCE1L-201ENST00000378644 858 ntAPPRIS P2 TSL 5 BASIC17.38■□□□□ 0.37
CTNSO60931 ICAM4-202ENST00000380770 1211 ntAPPRIS P3 TSL 1 (best) BASIC17.38■□□□□ 0.37
Retrieved 100 of 98,524 protein–RNA pairs in 42.5 ms