Protein–RNA interactions for Protein: O60890

OPHN1, Oligophrenin-1, humanhuman

Predictions only

Length 802 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
OPHN1O60890 HDAC11-221ENST00000522202 1559 ntAPPRIS ALT2 TSL 2 BASIC19.39■□□□□ 0.69
OPHN1O60890 RNF157-201ENST00000269391 4955 ntAPPRIS P3 TSL 1 (best) BASIC19.39■□□□□ 0.69
OPHN1O60890 ISM2-207ENST00000493585 1739 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
OPHN1O60890 IL4I1-202ENST00000391826 1863 ntAPPRIS ALT2 TSL 1 (best) BASIC19.39■□□□□ 0.69
OPHN1O60890 AP001351.1-201ENST00000501397 1865 ntTSL 2 BASIC19.39■□□□□ 0.69
OPHN1O60890 PODXL2-201ENST00000342480 2186 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
OPHN1O60890 AIRE-201ENST00000291582 2257 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
OPHN1O60890 FAM72C-202ENST00000584486 2297 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
OPHN1O60890 PARS2-201ENST00000371279 2347 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
OPHN1O60890 RIPK2-201ENST00000220751 2584 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
OPHN1O60890 RNF169-201ENST00000299563 7823 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
OPHN1O60890 ZNF623-203ENST00000526926 2612 ntAPPRIS ALT2 TSL 2 BASIC19.38■□□□□ 0.69
OPHN1O60890 RAB4A-205ENST00000618010 2799 ntTSL 3 BASIC19.38■□□□□ 0.69
OPHN1O60890 CENPA-201ENST00000233505 1299 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
OPHN1O60890 KRT6C-201ENST00000252250 2289 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
OPHN1O60890 KRT6B-201ENST00000252252 2282 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
OPHN1O60890 CCDC27-201ENST00000294600 2176 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
OPHN1O60890 RHEBL1-201ENST00000301068 1210 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
OPHN1O60890 TYMS-201ENST00000323224 1327 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
OPHN1O60890 COPE-203ENST00000351079 907 ntTSL 2 BASIC19.38■□□□□ 0.69
OPHN1O60890 MCRS1-202ENST00000357123 1428 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
OPHN1O60890 LRRC27-203ENST00000368613 2113 ntAPPRIS P3 TSL 1 (best) BASIC19.38■□□□□ 0.69
OPHN1O60890 FKBP3-202ENST00000396062 1346 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
OPHN1O60890 BAIAP2-204ENST00000428708 2095 ntAPPRIS ALT2 TSL 1 (best) BASIC19.38■□□□□ 0.69
OPHN1O60890 B3GAT3P1-201ENST00000471720 806 ntBASIC19.38■□□□□ 0.69
OPHN1O60890 TNFSF13-208ENST00000483039 959 ntTSL 2 BASIC19.38■□□□□ 0.69
OPHN1O60890 PRSS44-201ENST00000515154 1146 ntBASIC19.38■□□□□ 0.69
OPHN1O60890 FADS2-209ENST00000521849 1703 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
OPHN1O60890 ZHX3-212ENST00000558993 1528 ntTSL 5 BASIC19.38■□□□□ 0.69
OPHN1O60890 AL445686.2-201ENST00000577528 1445 ntTSL 3 BASIC19.38■□□□□ 0.69
OPHN1O60890 GHDC-212ENST00000593209 1827 ntTSL 5 BASIC19.38■□□□□ 0.69
OPHN1O60890 C16orf74-207ENST00000602914 761 ntAPPRIS ALT2 TSL 2 BASIC19.38■□□□□ 0.69
OPHN1O60890 NDUFA10-214ENST00000620965 1489 ntAPPRIS ALT1 TSL 5 BASIC19.38■□□□□ 0.69
OPHN1O60890 RFC2-213ENST00000621097 1635 ntTSL 5 BASIC19.38■□□□□ 0.69
OPHN1O60890 AL358472.4-201ENST00000633140 710 ntBASIC19.38■□□□□ 0.69
OPHN1O60890 PRLHR-202ENST00000636925 1275 ntAPPRIS P1 BASIC19.38■□□□□ 0.69
OPHN1O60890 ZBTB33-201ENST00000326624 5211 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
OPHN1O60890 POFUT2-201ENST00000331343 4825 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
OPHN1O60890 CACNA1A-201ENST00000360228 8627 ntAPPRIS P4 TSL 1 (best) BASIC19.38■□□□□ 0.69
OPHN1O60890 UBR3-203ENST00000418381 7951 ntAPPRIS P1 TSL 5 BASIC19.38■□□□□ 0.69
OPHN1O60890 MMP9-201ENST00000372330 2336 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
OPHN1O60890 TEPSIN-201ENST00000300714 2287 ntAPPRIS P2 TSL 1 (best) BASIC19.37■□□□□ 0.69
OPHN1O60890 DNAJC28-204ENST00000617313 2237 ntAPPRIS P1 TSL 5 BASIC19.37■□□□□ 0.69
OPHN1O60890 FUCA1-201ENST00000374479 2047 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
OPHN1O60890 ABHD14B-202ENST00000361143 1636 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
OPHN1O60890 MSL1-202ENST00000398532 4707 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
OPHN1O60890 C18orf21-205ENST00000592875 1581 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
OPHN1O60890 KRT8P11-201ENST00000409686 1436 ntBASIC19.37■□□□□ 0.69
OPHN1O60890 TMEM250-201ENST00000418388 2823 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
OPHN1O60890 CACNA1B-205ENST00000371363 9758 ntAPPRIS ALT2 TSL 5 BASIC19.37■□□□□ 0.69
OPHN1O60890 COX7A1-201ENST00000292907 762 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
OPHN1O60890 GUK1-204ENST00000366721 689 ntTSL 3 BASIC19.37■□□□□ 0.69
OPHN1O60890 TSPY8-202ENST00000383000 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC19.37■□□□□ 0.69
OPHN1O60890 TSPY2-202ENST00000383042 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC19.37■□□□□ 0.69
OPHN1O60890 DERL1-203ENST00000419562 918 ntTSL 2 BASIC19.37■□□□□ 0.69
OPHN1O60890 HDAC11-AS1-201ENST00000424112 515 ntTSL 2 BASIC19.37■□□□□ 0.69
OPHN1O60890 TSPY3-201ENST00000424594 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC19.37■□□□□ 0.69
OPHN1O60890 TSPY10-202ENST00000444056 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC19.37■□□□□ 0.69
OPHN1O60890 MIR1302-2HG-202ENST00000473358 712 ntTSL 5 BASIC19.37■□□□□ 0.69
OPHN1O60890 SURF4-206ENST00000485435 1206 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
OPHN1O60890 AC063952.2-201ENST00000498792 1227 ntBASIC19.37■□□□□ 0.69
OPHN1O60890 LY6E-211ENST00000521699 1256 ntAPPRIS P2 TSL 5 BASIC19.37■□□□□ 0.69
OPHN1O60890 SSSCA1-206ENST00000531405 879 ntTSL 2 BASIC19.37■□□□□ 0.69
OPHN1O60890 AC140725.1-202ENST00000561145 712 ntTSL 5 BASIC19.37■□□□□ 0.69
OPHN1O60890 AC132938.3-201ENST00000579095 357 ntTSL 2 BASIC19.37■□□□□ 0.69
OPHN1O60890 AC103746.1-201ENST00000617440 1133 ntTSL 3 BASIC19.37■□□□□ 0.69
OPHN1O60890 KAZN-208ENST00000636203 6874 ntTSL 5 BASIC19.37■□□□□ 0.69
OPHN1O60890 FAM213A-206ENST00000615554 2213 ntAPPRIS P1 TSL 5 BASIC19.37■□□□□ 0.69
OPHN1O60890 PLIN2-201ENST00000276914 1972 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
OPHN1O60890 C19orf25-203ENST00000585675 1837 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
OPHN1O60890 SOCS3-201ENST00000330871 2734 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
OPHN1O60890 SHE-201ENST00000304760 6243 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
OPHN1O60890 PCCB-216ENST00000483687 1727 ntTSL 3 BASIC19.37■□□□□ 0.69
OPHN1O60890 FGFR3-205ENST00000440486 4287 ntAPPRIS P3 TSL 5 BASIC19.37■□□□□ 0.69
OPHN1O60890 LTBP4-203ENST00000308370 4948 ntAPPRIS P4 TSL 1 (best) BASIC19.36■□□□□ 0.69
OPHN1O60890 LRRC23-201ENST00000007969 1615 ntAPPRIS P4 TSL 1 (best) BASIC19.36■□□□□ 0.69
OPHN1O60890 CBX1-202ENST00000393408 2422 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
OPHN1O60890 RNF146-203ENST00000368314 2369 ntAPPRIS ALT1 TSL 2 BASIC19.36■□□□□ 0.69
OPHN1O60890 TRIM47-201ENST00000254816 2266 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
OPHN1O60890 CASC2-205ENST00000454781 2216 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
OPHN1O60890 OTUD1-201ENST00000376495 2933 ntAPPRIS P1 BASIC19.36■□□□□ 0.69
OPHN1O60890 BID-205ENST00000399774 2167 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
OPHN1O60890 PRSS50-202ENST00000315170 1372 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
OPHN1O60890 CNIH3-201ENST00000272133 2558 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
OPHN1O60890 GUCA1B-201ENST00000230361 1113 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
OPHN1O60890 IL17C-201ENST00000244241 1044 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
OPHN1O60890 TYMSOS-201ENST00000323813 844 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
OPHN1O60890 C9orf129-201ENST00000375419 1154 ntAPPRIS P1 TSL 5 BASIC19.36■□□□□ 0.69
OPHN1O60890 ICAM1-202ENST00000423829 1296 ntTSL 2 BASIC19.36■□□□□ 0.69
OPHN1O60890 SPAG16-207ENST00000432529 1250 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
OPHN1O60890 DCTN3-209ENST00000477738 713 ntTSL 3 BASIC19.36■□□□□ 0.69
OPHN1O60890 PRKCB-209ENST00000498058 480 ntTSL 3 BASIC19.36■□□□□ 0.69
OPHN1O60890 RAB2A-211ENST00000531289 1058 ntTSL 2 BASIC19.36■□□□□ 0.69
OPHN1O60890 METTL23-204ENST00000586752 904 ntTSL 2 BASIC19.36■□□□□ 0.69
OPHN1O60890 ABBA01031674.1-201ENST00000635145 728 ntBASIC19.36■□□□□ 0.69
OPHN1O60890 FDXR-217ENST00000582944 1766 ntTSL 2 BASIC19.36■□□□□ 0.69
OPHN1O60890 HAPLN4-201ENST00000291481 3449 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
OPHN1O60890 GPRIN2-201ENST00000374314 1696 ntAPPRIS P1 BASIC19.36■□□□□ 0.69
OPHN1O60890 FAM131A-204ENST00000418281 1664 ntTSL 5 BASIC19.36■□□□□ 0.69
OPHN1O60890 AK3-202ENST00000381809 2736 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Retrieved 100 of 98,524 protein–RNA pairs in 45.8 ms