Protein–RNA interactions for Protein: O60423

ATP8B3, Phospholipid-transporting ATPase IK, humanhuman

Predictions only

Length 1,300 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATP8B3O60423 AP003041.3-201ENST00000527151 707 ntBASIC20.07■□□□□ 0.8
ATP8B3O60423 MVB12A-204ENST00000528515 686 ntTSL 5 BASIC20.07■□□□□ 0.8
ATP8B3O60423 RNF165-206ENST00000590330 1049 ntTSL 2 BASIC20.07■□□□□ 0.8
ATP8B3O60423 STARD7-AS1-202ENST00000446816 1527 ntTSL 2 BASIC20.07■□□□□ 0.8
ATP8B3O60423 LEFTY2-201ENST00000366820 2287 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
ATP8B3O60423 LONP1-201ENST00000360614 3236 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
ATP8B3O60423 FARSA-202ENST00000423140 1720 ntTSL 2 BASIC20.07■□□□□ 0.8
ATP8B3O60423 CRYZL1-203ENST00000381540 1482 ntTSL 2 BASIC20.07■□□□□ 0.8
ATP8B3O60423 KATNBL1P6-202ENST00000562413 1466 ntBASIC20.07■□□□□ 0.8
ATP8B3O60423 CABIN1-202ENST00000337989 2422 ntAPPRIS ALT2 TSL 1 (best) BASIC20.07■□□□□ 0.8
ATP8B3O60423 TMEM110-MUSTN1-202ENST00000504329 1405 ntAPPRIS P1 TSL 5 BASIC20.07■□□□□ 0.8
ATP8B3O60423 TMEM129-202ENST00000382936 2810 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
ATP8B3O60423 HOXA9-201ENST00000343483 2060 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
ATP8B3O60423 CHMP4A-201ENST00000347519 1393 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
ATP8B3O60423 TRIP4-201ENST00000261884 2045 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
ATP8B3O60423 GRM5-201ENST00000305432 4475 ntAPPRIS P3 TSL 1 (best) BASIC20.07■□□□□ 0.8
ATP8B3O60423 PGLYRP2-202ENST00000340880 2230 ntAPPRIS P2 TSL 1 (best) BASIC20.07■□□□□ 0.8
ATP8B3O60423 PPHLN1-213ENST00000549190 1777 ntTSL 5 BASIC20.07■□□□□ 0.8
ATP8B3O60423 PER3-203ENST00000377541 1524 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
ATP8B3O60423 LETM1P2-201ENST00000597330 2178 ntBASIC20.06■□□□□ 0.8
ATP8B3O60423 CHRNA4-207ENST00000615287 5643 ntTSL 5 BASIC20.06■□□□□ 0.8
ATP8B3O60423 CDH22-201ENST00000372262 3661 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
ATP8B3O60423 C7orf49-202ENST00000424142 1738 ntTSL 2 BASIC20.06■□□□□ 0.8
ATP8B3O60423 HOXC10-201ENST00000303460 1936 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
ATP8B3O60423 PRDX5-201ENST00000265462 893 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
ATP8B3O60423 TERF1P1-201ENST00000311003 1181 ntBASIC20.06■□□□□ 0.8
ATP8B3O60423 TMEM88B-201ENST00000378821 492 ntAPPRIS P1 TSL 2 BASIC20.06■□□□□ 0.8
ATP8B3O60423 TRPT1-202ENST00000394546 1058 ntAPPRIS ALT1 TSL 5 BASIC20.06■□□□□ 0.8
ATP8B3O60423 AL451069.1-201ENST00000455414 634 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
ATP8B3O60423 TRPT1-210ENST00000541278 941 ntTSL 2 BASIC20.06■□□□□ 0.8
ATP8B3O60423 AC010531.1-201ENST00000568879 953 ntAPPRIS P1 TSL 4 BASIC20.06■□□□□ 0.8
ATP8B3O60423 AC126696.3-202ENST00000570159 553 ntTSL 5 BASIC20.06■□□□□ 0.8
ATP8B3O60423 CYB561D2-210ENST00000607121 1004 ntTSL 2 BASIC20.06■□□□□ 0.8
ATP8B3O60423 AC092865.7-201ENST00000641832 219 ntBASIC20.06■□□□□ 0.8
ATP8B3O60423 TNFSF9-201ENST00000245817 1665 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
ATP8B3O60423 DNAJC28-201ENST00000314399 1625 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
ATP8B3O60423 SLC35E1-208ENST00000595753 5099 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
ATP8B3O60423 HOXC11-201ENST00000243082 2039 ntTSL 3 BASIC20.06■□□□□ 0.8
ATP8B3O60423 MATN4-203ENST00000372754 2200 ntAPPRIS ALT2 TSL 5 BASIC20.06■□□□□ 0.8
ATP8B3O60423 CD55-206ENST00000391921 2433 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
ATP8B3O60423 C1QTNF1-201ENST00000311661 2624 ntTSL 2 BASIC20.06■□□□□ 0.8
ATP8B3O60423 CD8A-202ENST00000352580 1977 ntAPPRIS ALT2 TSL 2 BASIC20.06■□□□□ 0.8
ATP8B3O60423 MUTYH-202ENST00000355498 1776 ntAPPRIS ALT2 TSL 1 (best) BASIC20.06■□□□□ 0.8
ATP8B3O60423 AVL9-209ENST00000640103 1367 ntTSL 5 BASIC20.06■□□□□ 0.8
ATP8B3O60423 PTTG1IP-204ENST00000445724 2497 ntTSL 2 BASIC20.06■□□□□ 0.8
ATP8B3O60423 AP5S1-203ENST00000379573 1848 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
ATP8B3O60423 UQCRQ-201ENST00000378665 586 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
ATP8B3O60423 KRTAP5-3-201ENST00000399685 899 ntAPPRIS P1 BASIC20.05■□□□□ 0.8
ATP8B3O60423 RCN1P1-201ENST00000400413 996 ntBASIC20.05■□□□□ 0.8
ATP8B3O60423 RNF144A-AS1-204ENST00000437589 618 ntTSL 2 BASIC20.05■□□□□ 0.8
ATP8B3O60423 AL513523.10-201ENST00000623024 1186 ntAPPRIS P1 TSL 5 BASIC20.05■□□□□ 0.8
ATP8B3O60423 SIKE1-201ENST00000060969 2190 ntAPPRIS P3 TSL 1 (best) BASIC20.05■□□□□ 0.8
ATP8B3O60423 NAP1L5-201ENST00000323061 2321 ntAPPRIS P1 BASIC20.05■□□□□ 0.8
ATP8B3O60423 GGNBP2-210ENST00000611219 2315 ntTSL 2 BASIC20.05■□□□□ 0.8
ATP8B3O60423 NOM1-201ENST00000275820 6077 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
ATP8B3O60423 MTERF2-202ENST00000392830 1763 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
ATP8B3O60423 DAG1-221ENST00000541308 5676 ntAPPRIS P1 TSL 5 BASIC20.05■□□□□ 0.8
ATP8B3O60423 PTPA-201ENST00000337738 2845 ntTSL 2 BASIC20.05■□□□□ 0.8
ATP8B3O60423 ASCC2-202ENST00000397771 2823 ntAPPRIS P1 TSL 5 BASIC20.05■□□□□ 0.8
ATP8B3O60423 STXBP2-203ENST00000441779 1914 ntTSL 2 BASIC20.05■□□□□ 0.8
ATP8B3O60423 MCC-208ENST00000514701 2855 ntTSL 2 BASIC20.05■□□□□ 0.8
ATP8B3O60423 AL445433.2-201ENST00000425113 2544 ntTSL 2 BASIC20.05■□□□□ 0.8
ATP8B3O60423 NFYC-AS1-201ENST00000606277 1687 ntBASIC20.05■□□□□ 0.8
ATP8B3O60423 SLC39A7-201ENST00000374675 2153 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
ATP8B3O60423 QKI-203ENST00000361752 9463 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
ATP8B3O60423 SSC4D-201ENST00000275560 2801 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
ATP8B3O60423 KRT8P32-201ENST00000512863 1461 ntBASIC20.05■□□□□ 0.8
ATP8B3O60423 ELOC-209ENST00000602840 2780 ntTSL 5 BASIC20.05■□□□□ 0.8
ATP8B3O60423 AL365232.1-201ENST00000423730 1636 ntAPPRIS P1 TSL 5 BASIC20.05■□□□□ 0.8
ATP8B3O60423 PDLIM3-202ENST00000284770 1766 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
ATP8B3O60423 TMEM8A-204ENST00000431232 3691 ntAPPRIS P2 TSL 1 (best) BASIC20.04■□□□□ 0.8
ATP8B3O60423 HES7-201ENST00000317814 678 ntAPPRIS P3 TSL 1 (best) BASIC20.04■□□□□ 0.8
ATP8B3O60423 BOLA3-202ENST00000327428 639 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
ATP8B3O60423 TNNT3-206ENST00000381579 1042 ntAPPRIS ALT2 TSL 1 (best) BASIC20.04■□□□□ 0.8
ATP8B3O60423 PHB2-202ENST00000440277 996 ntTSL 5 BASIC20.04■□□□□ 0.8
ATP8B3O60423 AP001059.1-201ENST00000442785 523 ntTSL 3 BASIC20.04■□□□□ 0.8
ATP8B3O60423 KCTD7-202ENST00000443322 1160 ntAPPRIS ALT1 TSL 1 (best) BASIC20.04■□□□□ 0.8
ATP8B3O60423 OOEP-AS1-201ENST00000445350 463 ntTSL 3 BASIC20.04■□□□□ 0.8
ATP8B3O60423 ABHD14B-208ENST00000525795 980 ntAPPRIS P1 TSL 3 BASIC20.04■□□□□ 0.8
ATP8B3O60423 TMEM249-203ENST00000565365 975 ntAPPRIS P2 TSL 3 BASIC20.04■□□□□ 0.8
ATP8B3O60423 SUSD3-205ENST00000617293 1076 ntAPPRIS ALT2 TSL 3 BASIC20.04■□□□□ 0.8
ATP8B3O60423 MYC-208ENST00000641036 567 ntBASIC20.04■□□□□ 0.8
ATP8B3O60423 COLCA2-201ENST00000398035 1414 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
ATP8B3O60423 KRT8P3-201ENST00000519669 1449 ntBASIC20.04■□□□□ 0.8
ATP8B3O60423 TRIM61-201ENST00000329314 1582 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
ATP8B3O60423 PJA1-202ENST00000374571 2672 ntAPPRIS ALT2 TSL 1 (best) BASIC20.04■□□□□ 0.8
ATP8B3O60423 MRPL3-201ENST00000264995 1706 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
ATP8B3O60423 NECTIN3-211ENST00000493615 1876 ntAPPRIS ALT2 TSL 2 BASIC20.04■□□□□ 0.8
ATP8B3O60423 TFCP2-204ENST00000548115 1862 ntTSL 5 BASIC20.04■□□□□ 0.8
ATP8B3O60423 SMPD1-203ENST00000527275 2188 ntAPPRIS P3 TSL 2 BASIC20.04■□□□□ 0.8
ATP8B3O60423 PCDHA2-203ENST00000526136 5254 ntAPPRIS P2 TSL 1 (best) BASIC20.04■□□□□ 0.8
ATP8B3O60423 PRDM14-201ENST00000276594 2344 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
ATP8B3O60423 PRKAR1B-212ENST00000544935 2494 ntAPPRIS P1 TSL 5 BASIC20.04■□□□□ 0.8
ATP8B3O60423 PRDM1-202ENST00000369091 2612 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
ATP8B3O60423 CHRM4-201ENST00000433765 1511 ntAPPRIS P1 BASIC20.04■□□□□ 0.8
ATP8B3O60423 ZNF213-202ENST00000416391 2996 ntAPPRIS P1 TSL 5 BASIC20.04■□□□□ 0.8
ATP8B3O60423 HS3ST3A1-201ENST00000284110 2527 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
ATP8B3O60423 STK25-203ENST00000403346 2210 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
ATP8B3O60423 ST3GAL3-205ENST00000347631 1324 ntTSL 5 BASIC20.04■□□□□ 0.8
ATP8B3O60423 PPP1R7-207ENST00000407025 1592 ntAPPRIS P1 TSL 5 BASIC20.04■□□□□ 0.8
Retrieved 100 of 98,524 protein–RNA pairs in 24.3 ms