Protein–RNA interactions for Protein: O43541

SMAD6, Mothers against decapentaplegic homolog 6, humanhuman

Known RBP Predictions only

Length 496 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD6O43541 FAM187B-201ENST00000324675 1184 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
SMAD6O43541 COPS8-203ENST00000409334 794 ntTSL 5 BASIC18.76■□□□□ 0.59
SMAD6O43541 SMIM19-202ENST00000416469 691 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
SMAD6O43541 ISOC2-202ENST00000425675 998 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
SMAD6O43541 CATIP-AS1-202ENST00000441749 480 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
SMAD6O43541 NT5C2-211ENST00000470299 249 ntTSL 5 BASIC18.76■□□□□ 0.59
SMAD6O43541 AP000777.3-201ENST00000538705 491 ntTSL 3 BASIC18.76■□□□□ 0.59
SMAD6O43541 AC091076.1-201ENST00000610741 619 ntBASIC18.76■□□□□ 0.59
SMAD6O43541 AC116407.4-201ENST00000623319 1061 ntBASIC18.76■□□□□ 0.59
SMAD6O43541 AP000550.4-202ENST00000639755 178 ntBASIC18.76■□□□□ 0.59
SMAD6O43541 P2RY6-201ENST00000349767 1700 ntAPPRIS P1 TSL 2 BASIC18.76■□□□□ 0.59
SMAD6O43541 SIX5-201ENST00000317578 3318 ntAPPRIS P2 TSL 1 (best) BASIC18.76■□□□□ 0.59
SMAD6O43541 FAM239A-202ENST00000438107 2155 ntTSL 5 BASIC18.76■□□□□ 0.59
SMAD6O43541 MRGPRF-AS1-201ENST00000538407 1490 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
SMAD6O43541 GGT2-201ENST00000401924 2366 ntAPPRIS P1 TSL 5 BASIC18.76■□□□□ 0.59
SMAD6O43541 NECTIN3-206ENST00000485303 3664 ntAPPRIS P3 TSL 1 (best) BASIC18.76■□□□□ 0.59
SMAD6O43541 ZACN-201ENST00000334586 1335 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
SMAD6O43541 PRODH-215ENST00000610940 2405 ntAPPRIS P3 TSL 1 (best) BASIC18.75■□□□□ 0.59
SMAD6O43541 LAT-204ENST00000395461 1448 ntAPPRIS ALT2 TSL 1 (best) BASIC18.75■□□□□ 0.59
SMAD6O43541 TMEM8B-204ENST00000439587 2150 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
SMAD6O43541 HOXA11-201ENST00000006015 2295 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
SMAD6O43541 CA7-202ENST00000394069 1713 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
SMAD6O43541 ANO7L1-203ENST00000602586 1720 ntBASIC18.75■□□□□ 0.59
SMAD6O43541 FAM198A-202ENST00000430121 3121 ntAPPRIS P2 TSL 5 BASIC18.75■□□□□ 0.59
SMAD6O43541 CPNE7-201ENST00000268720 2657 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
SMAD6O43541 NMRK1-202ENST00000376808 1121 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
SMAD6O43541 REPIN1-210ENST00000482680 1029 ntTSL 2 BASIC18.75■□□□□ 0.59
SMAD6O43541 MIR3180-4-201ENST00000582223 153 ntBASIC18.75■□□□□ 0.59
SMAD6O43541 DBP-204ENST00000599385 709 ntTSL 3 BASIC18.75■□□□□ 0.59
SMAD6O43541 NDUFV2-AS1-203ENST00000608008 779 ntBASIC18.75■□□□□ 0.59
SMAD6O43541 IER3-202ENST00000376377 1350 ntBASIC18.75■□□□□ 0.59
SMAD6O43541 ARFRP1-207ENST00000612157 1698 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
SMAD6O43541 SEPT9-246ENST00000592951 1793 ntAPPRIS ALT2 TSL 2 BASIC18.75■□□□□ 0.59
SMAD6O43541 SCARF2-202ENST00000622235 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC18.75■□□□□ 0.59
SMAD6O43541 ITPKB-203ENST00000429204 6162 ntAPPRIS P1 TSL 5 BASIC18.75■□□□□ 0.59
SMAD6O43541 P2RY2-201ENST00000311131 2660 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
SMAD6O43541 MMAB-204ENST00000537236 1342 ntTSL 3 BASIC18.74■□□□□ 0.59
SMAD6O43541 CORO6-212ENST00000584969 1416 ntAPPRIS ALT1 TSL 5 BASIC18.74■□□□□ 0.59
SMAD6O43541 AL163051.1-201ENST00000569214 1512 ntBASIC18.74■□□□□ 0.59
SMAD6O43541 EIF2B4-210ENST00000493344 1949 ntTSL 5 BASIC18.74■□□□□ 0.59
SMAD6O43541 IL17RC-215ENST00000455057 2244 ntAPPRIS ALT2 TSL 1 (best) BASIC18.74■□□□□ 0.59
SMAD6O43541 TEAD2-202ENST00000377214 2440 ntAPPRIS ALT1 TSL 2 BASIC18.74■□□□□ 0.59
SMAD6O43541 REPS1-203ENST00000409812 2511 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
SMAD6O43541 MCU-202ENST00000373053 2949 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
SMAD6O43541 AC087289.5-201ENST00000586076 3175 ntBASIC18.74■□□□□ 0.59
SMAD6O43541 MBD3-207ENST00000590550 2782 ntTSL 2 BASIC18.74■□□□□ 0.59
SMAD6O43541 RGMB-207ENST00000513185 2052 ntAPPRIS ALT2 TSL 2 BASIC18.74■□□□□ 0.59
SMAD6O43541 ZNF768-202ENST00000562803 1999 ntAPPRIS ALT2 TSL 3 BASIC18.74■□□□□ 0.59
SMAD6O43541 CCDC63-202ENST00000545036 1887 ntAPPRIS ALT2 TSL 2 BASIC18.74■□□□□ 0.59
SMAD6O43541 AC093525.10-201ENST00000625130 1569 ntBASIC18.74■□□□□ 0.59
SMAD6O43541 ENDOV-225ENST00000522751 1475 ntTSL 5 BASIC18.74■□□□□ 0.59
SMAD6O43541 ZFYVE21-202ENST00000311141 1383 ntAPPRIS P3 TSL 1 (best) BASIC18.74■□□□□ 0.59
SMAD6O43541 UXT-201ENST00000333119 574 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
SMAD6O43541 AP000593.1-201ENST00000393668 712 ntBASIC18.74■□□□□ 0.59
SMAD6O43541 SCO2-202ENST00000395693 992 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
SMAD6O43541 AC116353.4-201ENST00000507279 576 ntTSL 4 BASIC18.74■□□□□ 0.59
SMAD6O43541 IFI27L1-206ENST00000554562 571 ntTSL 3 BASIC18.74■□□□□ 0.59
SMAD6O43541 ABCD4-228ENST00000557588 763 ntTSL 3 BASIC18.74■□□□□ 0.59
SMAD6O43541 FXYD7-203ENST00000586063 456 ntAPPRIS ALT2 TSL 3 BASIC18.74■□□□□ 0.59
SMAD6O43541 AC027682.6-202ENST00000621378 795 ntTSL 2 BASIC18.74■□□□□ 0.59
SMAD6O43541 SLC27A3-204ENST00000368661 2410 ntAPPRIS P2 TSL 1 (best) BASIC18.74■□□□□ 0.59
SMAD6O43541 SYT17-207ENST00000568115 1721 ntTSL 5 BASIC18.74■□□□□ 0.59
SMAD6O43541 ERCC2-205ENST00000485403 1538 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
SMAD6O43541 CRTC1-203ENST00000594658 2384 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
SMAD6O43541 AC005082.1-201ENST00000413042 2259 ntBASIC18.74■□□□□ 0.59
SMAD6O43541 NTMT1-203ENST00000372483 1315 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
SMAD6O43541 NEK2-205ENST00000540251 1318 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
SMAD6O43541 EWSR1-208ENST00000414183 2189 ntAPPRIS P4 TSL 2 BASIC18.74■□□□□ 0.59
SMAD6O43541 SDF4-201ENST00000263741 2079 ntAPPRIS P3 TSL 1 (best) BASIC18.73■□□□□ 0.59
SMAD6O43541 PCSK6-214ENST00000611716 4409 ntAPPRIS P4 TSL 1 (best) BASIC18.73■□□□□ 0.59
SMAD6O43541 ATP1B1-202ENST00000367816 2608 ntAPPRIS P1 TSL 5 BASIC18.73■□□□□ 0.59
SMAD6O43541 AC026362.1-201ENST00000540866 5618 ntTSL 2 BASIC18.73■□□□□ 0.59
SMAD6O43541 AL031598.1-201ENST00000561511 1773 ntBASIC18.73■□□□□ 0.59
SMAD6O43541 MEN1-205ENST00000377316 2868 ntTSL 5 BASIC18.73■□□□□ 0.59
SMAD6O43541 ZNF398-202ENST00000475153 2860 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
SMAD6O43541 SMARCC2-201ENST00000267064 4076 ntAPPRIS P4 TSL 1 (best) BASIC18.73■□□□□ 0.59
SMAD6O43541 CCDC34-202ENST00000328697 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC18.73■□□□□ 0.59
SMAD6O43541 EGFL7-203ENST00000371699 2125 ntAPPRIS P1 TSL 2 BASIC18.73■□□□□ 0.59
SMAD6O43541 ADPGK-201ENST00000311669 2557 ntAPPRIS P1 TSL 2 BASIC18.73■□□□□ 0.59
SMAD6O43541 METTL5-207ENST00000410097 1370 ntTSL 2 BASIC18.73■□□□□ 0.59
SMAD6O43541 PTH2R-204ENST00000617735 2472 ntTSL 2 BASIC18.73■□□□□ 0.59
SMAD6O43541 RHOT1-202ENST00000354266 2919 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
SMAD6O43541 ARHGAP22-203ENST00000374172 2380 ntTSL 2 BASIC18.73■□□□□ 0.59
SMAD6O43541 NDUFA1-201ENST00000371437 766 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
SMAD6O43541 UPK3BP1-201ENST00000428678 509 ntBASIC18.73■□□□□ 0.59
SMAD6O43541 KRTCAP3-207ENST00000543753 956 ntAPPRIS P1 TSL 5 BASIC18.73■□□□□ 0.59
SMAD6O43541 AC132938.3-201ENST00000579095 357 ntTSL 2 BASIC18.73■□□□□ 0.59
SMAD6O43541 MB21D1-202ENST00000370318 1917 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
SMAD6O43541 RGMB-AS1-201ENST00000498871 1903 ntTSL 2 BASIC18.72■□□□□ 0.59
SMAD6O43541 ZNF623-203ENST00000526926 2612 ntAPPRIS ALT2 TSL 2 BASIC18.72■□□□□ 0.59
SMAD6O43541 ANKRD40-201ENST00000285243 4184 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
SMAD6O43541 PBK-203ENST00000522944 1499 ntTSL 2 BASIC18.72■□□□□ 0.59
SMAD6O43541 DRD5-201ENST00000304374 2330 ntAPPRIS P1 BASIC18.72■□□□□ 0.59
SMAD6O43541 IL10RB-201ENST00000290200 1963 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
SMAD6O43541 FOXP4-205ENST00000409208 3341 ntAPPRIS P1 TSL 5 BASIC18.72■□□□□ 0.59
SMAD6O43541 GUCA1B-201ENST00000230361 1113 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
SMAD6O43541 C20orf196-201ENST00000303142 1154 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
SMAD6O43541 BEX1-201ENST00000372728 864 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
SMAD6O43541 TSPY8-203ENST00000383005 435 ntTSL 5 BASIC18.72■□□□□ 0.59
SMAD6O43541 RNF216P1-205ENST00000406089 807 ntTSL 5 BASIC18.72■□□□□ 0.59
Retrieved 100 of 98,524 protein–RNA pairs in 28 ms