Protein–RNA interactions for Protein: O15516

CLOCK, Circadian locomoter output cycles protein kaput, humanhuman

Predictions only

Length 846 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLOCKO15516 ZDHHC12-202ENST00000372667 1187 ntTSL 5 BASIC17.65■□□□□ 0.42
CLOCKO15516 DYNLRB1-203ENST00000374846 1044 ntTSL 5 BASIC17.65■□□□□ 0.42
CLOCKO15516 MRPS26-201ENST00000380325 1127 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
CLOCKO15516 NPY-202ENST00000405982 565 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
CLOCKO15516 AC114730.2-201ENST00000417267 668 ntTSL 3 BASIC17.65■□□□□ 0.42
CLOCKO15516 AL807752.2-201ENST00000435463 301 ntTSL 3 BASIC17.65■□□□□ 0.42
CLOCKO15516 AC073912.1-201ENST00000546264 587 ntTSL 3 BASIC17.65■□□□□ 0.42
CLOCKO15516 GNB5-211ENST00000560116 918 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
CLOCKO15516 AC113189.1-201ENST00000570444 327 ntTSL 3 BASIC17.65■□□□□ 0.42
CLOCKO15516 EML2-AS1-202ENST00000591087 838 ntTSL 3 BASIC17.65■□□□□ 0.42
CLOCKO15516 HSD11B1L-219ENST00000581893 1540 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
CLOCKO15516 ARFIP2-201ENST00000254584 2543 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
CLOCKO15516 SUZ12-204ENST00000580398 3977 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
CLOCKO15516 RBM42-204ENST00000589559 1328 ntTSL 5 BASIC17.65■□□□□ 0.42
CLOCKO15516 GPSM2-201ENST00000264126 3032 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
CLOCKO15516 ARAP1-AS2-201ENST00000500163 1824 ntTSL 2 BASIC17.65■□□□□ 0.42
CLOCKO15516 BFSP1-201ENST00000377868 2063 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
CLOCKO15516 SLC44A3-201ENST00000271227 2388 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
CLOCKO15516 CPZ-201ENST00000315782 2136 ntAPPRIS P3 TSL 1 (best) BASIC17.65■□□□□ 0.42
CLOCKO15516 ITGB4-201ENST00000200181 5919 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
CLOCKO15516 FBLIM1-202ENST00000375766 3695 ntAPPRIS P1 TSL 2 BASIC17.65■□□□□ 0.42
CLOCKO15516 ETNK2-203ENST00000367202 2434 ntAPPRIS P3 TSL 1 (best) BASIC17.64■□□□□ 0.42
CLOCKO15516 OGG1-201ENST00000302003 1655 ntAPPRIS P4 TSL 1 (best) BASIC17.64■□□□□ 0.42
CLOCKO15516 ABHD1-201ENST00000316470 1400 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.42
CLOCKO15516 MEST-201ENST00000223215 2465 ntAPPRIS P4 TSL 1 (best) BASIC17.64■□□□□ 0.42
CLOCKO15516 KCNQ2-207ENST00000370224 3004 ntTSL 5 BASIC17.64■□□□□ 0.41
CLOCKO15516 STX5-202ENST00000377897 1785 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
CLOCKO15516 C2CD2L-205ENST00000528586 2320 ntTSL 2 BASIC17.64■□□□□ 0.41
CLOCKO15516 AP5B1-201ENST00000532090 4811 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
CLOCKO15516 PNCK-201ENST00000340888 1508 ntAPPRIS P1 TSL 5 BASIC17.64■□□□□ 0.41
CLOCKO15516 RRP7BP-201ENST00000357802 2375 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
CLOCKO15516 ARL2-201ENST00000246747 979 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
CLOCKO15516 OLFM1-202ENST00000277415 1014 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
CLOCKO15516 WDR74-202ENST00000311713 1153 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
CLOCKO15516 SULT1A1-202ENST00000350842 1282 ntTSL 3 BASIC17.64■□□□□ 0.41
CLOCKO15516 YBX1P10-201ENST00000444752 975 ntBASIC17.64■□□□□ 0.41
CLOCKO15516 UNC93B4-201ENST00000505679 747 ntBASIC17.64■□□□□ 0.41
CLOCKO15516 FAM213B-215ENST00000537325 1096 ntAPPRIS ALT2 TSL 2 BASIC17.64■□□□□ 0.41
CLOCKO15516 RNF166-203ENST00000541206 2419 ntTSL 2 BASIC17.64■□□□□ 0.41
CLOCKO15516 HLA-G-205ENST00000428701 1578 ntAPPRIS P2 BASIC17.64■□□□□ 0.41
CLOCKO15516 DTX2-202ENST00000413936 2472 ntAPPRIS P3 TSL 1 (best) BASIC17.64■□□□□ 0.41
CLOCKO15516 MAP3K6-202ENST00000374040 4309 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
CLOCKO15516 CMPK2-201ENST00000256722 2884 ntAPPRIS P3 TSL 1 (best) BASIC17.64■□□□□ 0.41
CLOCKO15516 RIC8A-208ENST00000527696 2565 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
CLOCKO15516 UQCC3-202ENST00000531323 2288 ntAPPRIS P1 TSL 3 BASIC17.64■□□□□ 0.41
CLOCKO15516 ACSM2A-201ENST00000219054 1988 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
CLOCKO15516 DIO1-201ENST00000322679 1658 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
CLOCKO15516 DIO1-217ENST00000617230 1656 ntTSL 5 BASIC17.64■□□□□ 0.41
CLOCKO15516 COL4A3BP-203ENST00000380494 5651 ntTSL 2 BASIC17.64■□□□□ 0.41
CLOCKO15516 MAP7-203ENST00000438100 2633 ntAPPRIS ALT2 TSL 2 BASIC17.64■□□□□ 0.41
CLOCKO15516 FAM49B-214ENST00000519540 2021 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
CLOCKO15516 SNAI3-AS1-205ENST00000568633 2096 ntBASIC17.63■□□□□ 0.41
CLOCKO15516 MIPEP-201ENST00000382172 2400 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
CLOCKO15516 GATAD2A-202ENST00000360315 5671 ntAPPRIS P3 TSL 5 BASIC17.63■□□□□ 0.41
CLOCKO15516 LINC00896-202ENST00000609602 2128 ntBASIC17.63■□□□□ 0.41
CLOCKO15516 C1orf210-202ENST00000523677 1478 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
CLOCKO15516 DENND5B-201ENST00000354285 3132 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
CLOCKO15516 DDX17-211ENST00000640332 2190 ntAPPRIS P3 TSL 1 (best) BASIC17.63■□□□□ 0.41
CLOCKO15516 DDX17-212ENST00000640668 2196 ntAPPRIS ALT2 TSL 1 (best) BASIC17.63■□□□□ 0.41
CLOCKO15516 CIZ1-226ENST00000629610 2855 ntAPPRIS ALT2 TSL 2 BASIC17.63■□□□□ 0.41
CLOCKO15516 ART5-203ENST00000397068 1504 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
CLOCKO15516 IQSEC2-202ENST00000396435 6015 ntAPPRIS ALT2 TSL 1 (best) BASIC17.63■□□□□ 0.41
CLOCKO15516 PMAIP1-202ENST00000316660 1948 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
CLOCKO15516 PCDHA8-201ENST00000378123 2616 ntAPPRIS ALT2 BASIC17.63■□□□□ 0.41
CLOCKO15516 TMEM183A-201ENST00000367242 3019 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
CLOCKO15516 SUPT4H1-202ENST00000577396 1643 ntTSL 2 BASIC17.63■□□□□ 0.41
CLOCKO15516 BAALC-201ENST00000297574 801 ntTSL 3 BASIC17.63■□□□□ 0.41
CLOCKO15516 AC012146.1-202ENST00000413077 474 ntTSL 2 BASIC17.63■□□□□ 0.41
CLOCKO15516 ZDHHC20-204ENST00000415724 1296 ntAPPRIS ALT2 TSL 5 BASIC17.63■□□□□ 0.41
CLOCKO15516 KRT17P3-201ENST00000420566 1262 ntBASIC17.63■□□□□ 0.41
CLOCKO15516 METTL21A-207ENST00000442521 1003 ntAPPRIS P1 TSL 2 BASIC17.63■□□□□ 0.41
CLOCKO15516 LINC01881-205ENST00000456398 1235 ntTSL 5 BASIC17.63■□□□□ 0.41
CLOCKO15516 AC100835.1-201ENST00000565737 498 ntTSL 5 BASIC17.63■□□□□ 0.41
CLOCKO15516 KANSL1-AS1-203ENST00000572973 424 ntTSL 3 BASIC17.63■□□□□ 0.41
CLOCKO15516 AC008403.3-201ENST00000598924 454 ntBASIC17.63■□□□□ 0.41
CLOCKO15516 AC006557.6-201ENST00000623071 864 ntBASIC17.63■□□□□ 0.41
CLOCKO15516 PTPN6-204ENST00000456013 2389 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
CLOCKO15516 AC009053.2-201ENST00000563701 2365 ntBASIC17.63■□□□□ 0.41
CLOCKO15516 CACNA1A-215ENST00000635727 7536 ntAPPRIS ALT2 TSL 5 BASIC17.63■□□□□ 0.41
CLOCKO15516 UBE2Q2-201ENST00000267938 3130 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
CLOCKO15516 KCNA2-201ENST00000316361 2827 ntAPPRIS P1 TSL 2 BASIC17.63■□□□□ 0.41
CLOCKO15516 CCDC43-201ENST00000315286 2082 ntAPPRIS P2 TSL 1 (best) BASIC17.63■□□□□ 0.41
CLOCKO15516 SLC38A8-201ENST00000299709 1308 ntAPPRIS P1 TSL 5 BASIC17.63■□□□□ 0.41
CLOCKO15516 CYP2F1-201ENST00000331105 1720 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
CLOCKO15516 GPC2-201ENST00000292377 2532 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
CLOCKO15516 NR2F1-201ENST00000327111 3732 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
CLOCKO15516 IL15-208ENST00000529613 1355 ntAPPRIS P1 TSL 5 BASIC17.63■□□□□ 0.41
CLOCKO15516 RNASET2-214ENST00000620173 1391 ntTSL 5 BASIC17.63■□□□□ 0.41
CLOCKO15516 EXOSC3-201ENST00000327304 1806 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
CLOCKO15516 WASF1-202ENST00000359451 3075 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
CLOCKO15516 CALHM2-201ENST00000260743 1859 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
CLOCKO15516 KRT16P6-201ENST00000417510 1873 ntTSL 5 BASIC17.63■□□□□ 0.41
CLOCKO15516 C6orf223-203ENST00000442114 3109 ntAPPRIS ALT2 TSL 1 (best) BASIC17.63■□□□□ 0.41
CLOCKO15516 MYC-207ENST00000621592 2366 ntAPPRIS ALT1 TSL 1 (best) BASIC17.62■□□□□ 0.41
CLOCKO15516 AP006587.1-201ENST00000534129 1502 ntBASIC17.62■□□□□ 0.41
CLOCKO15516 PCDHA8-202ENST00000531613 5260 ntAPPRIS P2 TSL 1 (best) BASIC17.62■□□□□ 0.41
CLOCKO15516 CDH22-203ENST00000537909 3902 ntAPPRIS P1 TSL 2 BASIC17.62■□□□□ 0.41
CLOCKO15516 WWOX-205ENST00000539474 1670 ntTSL 5 BASIC17.62■□□□□ 0.41
CLOCKO15516 OLFM2-203ENST00000590841 1665 ntTSL 2 BASIC17.62■□□□□ 0.41
CLOCKO15516 RPS6KA3-201ENST00000379565 7918 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Retrieved 100 of 98,524 protein–RNA pairs in 31.1 ms