Protein–RNA interactions for Protein: A7MD48

SRRM4, Serine/arginine repetitive matrix protein 4, humanhuman

Known RBP Predictions only

Length 611 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SRRM4A7MD48 EIF2B5-201ENST00000273783 2655 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
SRRM4A7MD48 CIZ1-226ENST00000629610 2855 ntAPPRIS ALT2 TSL 2 BASIC14.99□□□□□ -0.01
SRRM4A7MD48 ACADS-202ENST00000411593 1398 ntTSL 2 BASIC14.98□□□□□ -0.01
SRRM4A7MD48 CABIN1-202ENST00000337989 2422 ntAPPRIS ALT2 TSL 1 (best) BASIC14.98□□□□□ -0.01
SRRM4A7MD48 MCCC1-214ENST00000610757 2410 ntTSL 5 BASIC14.98□□□□□ -0.01
SRRM4A7MD48 MFSD10-205ENST00000507555 1573 ntTSL 5 BASIC14.98□□□□□ -0.01
SRRM4A7MD48 VPS26B-202ENST00000525095 1558 ntAPPRIS P1 TSL 5 BASIC14.98□□□□□ -0.01
SRRM4A7MD48 EMC8-201ENST00000253457 1962 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
SRRM4A7MD48 WNT5B-201ENST00000310594 2184 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
SRRM4A7MD48 USP39-201ENST00000323701 2177 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
SRRM4A7MD48 SLC35A3-217ENST00000639807 2767 ntTSL 5 BASIC14.98□□□□□ -0.01
SRRM4A7MD48 BAG5-201ENST00000299204 4848 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
SRRM4A7MD48 DKK3-203ENST00000525493 1326 ntTSL 2 BASIC14.98□□□□□ -0.01
SRRM4A7MD48 PHB2-203ENST00000535923 1515 ntAPPRIS P2 TSL 5 BASIC14.98□□□□□ -0.01
SRRM4A7MD48 SPNS1-204ENST00000352260 1948 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
SRRM4A7MD48 ZNF205-206ENST00000620094 2309 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
SRRM4A7MD48 RSPO4-201ENST00000217260 2707 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
SRRM4A7MD48 VMAC-201ENST00000339485 2254 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
SRRM4A7MD48 CCDC43-201ENST00000315286 2082 ntAPPRIS P2 TSL 1 (best) BASIC14.98□□□□□ -0.01
SRRM4A7MD48 AC116565.2-201ENST00000637674 1854 ntTSL 2 BASIC14.98□□□□□ -0.01
SRRM4A7MD48 BTG3-201ENST00000339775 1485 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
SRRM4A7MD48 CXCL3-201ENST00000296026 1075 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
SRRM4A7MD48 GYG2P1-201ENST00000357871 623 ntTSL 3 BASIC14.98□□□□□ -0.01
SRRM4A7MD48 PHOSPHO2-201ENST00000359744 1125 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
SRRM4A7MD48 BUB3-202ENST00000368859 667 ntTSL 3 BASIC14.98□□□□□ -0.01
SRRM4A7MD48 NKAIN4-201ENST00000370307 793 ntTSL 5 BASIC14.98□□□□□ -0.01
SRRM4A7MD48 MDFI-202ENST00000373050 809 ntTSL 2 BASIC14.98□□□□□ -0.01
SRRM4A7MD48 TRPT1-203ENST00000394547 865 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
SRRM4A7MD48 PAIP2-208ENST00000511706 468 ntTSL 5 BASIC14.98□□□□□ -0.01
SRRM4A7MD48 CDH18-AS1-201ENST00000513573 424 ntTSL 2 BASIC14.98□□□□□ -0.01
SRRM4A7MD48 AL354712.1-201ENST00000563570 477 ntTSL 3 BASIC14.98□□□□□ -0.01
SRRM4A7MD48 TGIF1-222ENST00000577543 729 ntTSL 3 BASIC14.98□□□□□ -0.01
SRRM4A7MD48 KLHL26-205ENST00000599006 989 ntTSL 5 BASIC14.98□□□□□ -0.01
SRRM4A7MD48 DECR2-212ENST00000627716 352 ntTSL 2 BASIC14.98□□□□□ -0.01
SRRM4A7MD48 MYC-208ENST00000641036 567 ntBASIC14.98□□□□□ -0.01
SRRM4A7MD48 FBXO41-205ENST00000521871 7336 ntAPPRIS P1 TSL 5 BASIC14.98□□□□□ -0.01
SRRM4A7MD48 STK25-203ENST00000403346 2210 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
SRRM4A7MD48 SCYL1-203ENST00000420247 2583 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
SRRM4A7MD48 EGFL6-202ENST00000380602 2385 ntAPPRIS ALT2 TSL 1 (best) BASIC14.98□□□□□ -0.01
SRRM4A7MD48 AL445686.2-201ENST00000577528 1445 ntTSL 3 BASIC14.98□□□□□ -0.01
SRRM4A7MD48 EVI5L-201ENST00000270530 3855 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
SRRM4A7MD48 RAVER1-207ENST00000615032 1952 ntAPPRIS ALT2 TSL 5 BASIC14.98□□□□□ -0.01
SRRM4A7MD48 ZCCHC24-202ENST00000372336 4933 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
SRRM4A7MD48 TTC22-201ENST00000371274 2149 ntTSL 2 BASIC14.98□□□□□ -0.01
SRRM4A7MD48 SMN2-202ENST00000380742 1388 ntAPPRIS ALT2 TSL 5 BASIC14.98□□□□□ -0.01
SRRM4A7MD48 SLC25A3-211ENST00000548847 1369 ntTSL 5 BASIC14.98□□□□□ -0.01
SRRM4A7MD48 ABALON-201ENST00000629058 1903 ntBASIC14.98□□□□□ -0.01
SRRM4A7MD48 HYAL1-204ENST00000395144 2081 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
SRRM4A7MD48 ZNF419-207ENST00000442920 1857 ntAPPRIS ALT2 TSL 2 BASIC14.97□□□□□ -0.01
SRRM4A7MD48 THOP1-205ENST00000586677 1872 ntTSL 2 BASIC14.97□□□□□ -0.01
SRRM4A7MD48 GRB10-208ENST00000403097 5432 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
SRRM4A7MD48 PLEKHG5-206ENST00000377748 5221 ntAPPRIS ALT2 TSL 2 BASIC14.97□□□□□ -0.01
SRRM4A7MD48 TEX13A-202ENST00000609007 1349 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
SRRM4A7MD48 CD276-201ENST00000318424 2738 ntTSL 5 BASIC14.97□□□□□ -0.01
SRRM4A7MD48 PPFIA1-202ENST00000389547 4133 ntAPPRIS ALT1 TSL 1 (best) BASIC14.97□□□□□ -0.01
SRRM4A7MD48 NUDT17-201ENST00000334513 1473 ntAPPRIS P1 TSL 5 BASIC14.97□□□□□ -0.01
SRRM4A7MD48 NSMAF-202ENST00000427130 3371 ntTSL 2 BASIC14.97□□□□□ -0.01
SRRM4A7MD48 PTPRJ-202ENST00000440289 3158 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
SRRM4A7MD48 ENSA-205ENST00000361532 792 ntTSL 2 BASIC14.97□□□□□ -0.01
SRRM4A7MD48 TIMM17B-201ENST00000376582 950 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
SRRM4A7MD48 LGALS7-201ENST00000378626 466 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
SRRM4A7MD48 TMSB4X-201ENST00000380633 495 ntAPPRIS P1 TSL 3 BASIC14.97□□□□□ -0.01
SRRM4A7MD48 AC007040.1-201ENST00000416229 477 ntTSL 3 BASIC14.97□□□□□ -0.01
SRRM4A7MD48 CRYGFP-201ENST00000418459 633 ntBASIC14.97□□□□□ -0.01
SRRM4A7MD48 SGO1-AS1-202ENST00000448208 819 ntTSL 3 BASIC14.97□□□□□ -0.01
SRRM4A7MD48 DBNL-214ENST00000456905 1241 ntTSL 2 BASIC14.97□□□□□ -0.01
SRRM4A7MD48 TNFRSF12A-206ENST00000575124 1133 ntTSL 2 BASIC14.97□□□□□ -0.01
SRRM4A7MD48 KCNH2-203ENST00000430723 2648 ntTSL 5 BASIC14.97□□□□□ -0.01
SRRM4A7MD48 PTK6-201ENST00000217185 2401 ntTSL 2 BASIC14.97□□□□□ -0.01
SRRM4A7MD48 SLC37A2-203ENST00000403796 2910 ntAPPRIS ALT1 TSL 2 BASIC14.97□□□□□ -0.01
SRRM4A7MD48 RBM7-201ENST00000375490 2064 ntAPPRIS ALT1 TSL 1 (best) BASIC14.97□□□□□ -0.01
SRRM4A7MD48 LTBP3-202ENST00000322147 4046 ntAPPRIS P3 TSL 1 (best) BASIC14.97□□□□□ -0.01
SRRM4A7MD48 RRP7BP-201ENST00000357802 2375 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
SRRM4A7MD48 AL034417.2-201ENST00000445300 2044 ntTSL 2 BASIC14.97□□□□□ -0.01
SRRM4A7MD48 DBX1-201ENST00000524983 1380 ntAPPRIS P1 TSL 5 BASIC14.97□□□□□ -0.01
SRRM4A7MD48 AVL9-209ENST00000640103 1367 ntTSL 5 BASIC14.97□□□□□ -0.01
SRRM4A7MD48 AL133373.2-201ENST00000623187 2828 ntBASIC14.97□□□□□ -0.01
SRRM4A7MD48 PARP15-202ENST00000464300 2156 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
SRRM4A7MD48 INTS11-249ENST00000618806 1523 ntTSL 2 BASIC14.97□□□□□ -0.01
SRRM4A7MD48 ANXA3-201ENST00000264908 1657 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
SRRM4A7MD48 TICAM1-202ENST00000621756 1650 ntTSL 5 BASIC14.97□□□□□ -0.01
SRRM4A7MD48 HARBI1-201ENST00000326737 1967 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
SRRM4A7MD48 SERPINH1-215ENST00000533603 2299 ntAPPRIS P1 TSL 2 BASIC14.96□□□□□ -0.01
SRRM4A7MD48 APBB1-210ENST00000530885 1626 ntTSL 2 BASIC14.96□□□□□ -0.01
SRRM4A7MD48 KCNIP4-205ENST00000382152 1767 ntTSL 5 BASIC14.96□□□□□ -0.01
SRRM4A7MD48 FNBP1-203ENST00000443566 5227 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
SRRM4A7MD48 SYNGR1-201ENST00000216155 497 ntTSL 3 BASIC14.96□□□□□ -0.01
SRRM4A7MD48 MSGN1-201ENST00000281047 606 ntAPPRIS P1 BASIC14.96□□□□□ -0.01
SRRM4A7MD48 TPPP3-201ENST00000290942 1116 ntAPPRIS P1 TSL 2 BASIC14.96□□□□□ -0.01
SRRM4A7MD48 BAALC-201ENST00000297574 801 ntTSL 3 BASIC14.96□□□□□ -0.01
SRRM4A7MD48 SEC61A2-201ENST00000298428 1893 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
SRRM4A7MD48 SOST-201ENST00000301691 2300 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
SRRM4A7MD48 FAM26F-202ENST00000368605 1117 ntAPPRIS P1 TSL 5 BASIC14.96□□□□□ -0.01
SRRM4A7MD48 TCEAL6-202ENST00000372774 1106 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
SRRM4A7MD48 MIR564-202ENST00000385049 94 ntBASIC14.96□□□□□ -0.01
SRRM4A7MD48 TPPP3-202ENST00000393957 1058 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
SRRM4A7MD48 UBB-203ENST00000395839 1012 ntAPPRIS P1 TSL 2 BASIC14.96□□□□□ -0.01
SRRM4A7MD48 AL390728.5-201ENST00000428687 706 ntTSL 3 BASIC14.96□□□□□ -0.01
SRRM4A7MD48 AL445645.1-201ENST00000451318 1019 ntTSL 2 BASIC14.96□□□□□ -0.01
SRRM4A7MD48 AC008550.1-201ENST00000511500 884 ntBASIC14.96□□□□□ -0.01
Retrieved 100 of 98,524 protein–RNA pairs in 33.5 ms