Protein–RNA interactions for Protein: A0A5B6

TCRBV3S1, T-cell receptor beta variable 28 (Fragment), humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TCRBV3S1A0A5B6 PSTPIP1-201ENST00000379595 1840 ntAPPRIS ALT1 TSL 5 BASIC17.41■□□□□ 0.38
TCRBV3S1A0A5B6 CRYZL1-203ENST00000381540 1482 ntTSL 2 BASIC17.41■□□□□ 0.38
TCRBV3S1A0A5B6 HASPIN-201ENST00000325418 2797 ntAPPRIS P1 BASIC17.41■□□□□ 0.38
TCRBV3S1A0A5B6 SETMAR-206ENST00000430981 1671 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
TCRBV3S1A0A5B6 COBLL1-201ENST00000342193 4898 ntAPPRIS P3 TSL 1 (best) BASIC17.41■□□□□ 0.38
TCRBV3S1A0A5B6 ABCC3-202ENST00000427699 1881 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
TCRBV3S1A0A5B6 JAK2-201ENST00000381652 5285 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
TCRBV3S1A0A5B6 QKI-201ENST00000275262 6964 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
TCRBV3S1A0A5B6 QSOX2-201ENST00000358701 4530 ntAPPRIS P1 TSL 2 BASIC17.41■□□□□ 0.38
TCRBV3S1A0A5B6 AC008687.8-201ENST00000599795 1748 ntAPPRIS P1 TSL 2 BASIC17.41■□□□□ 0.38
TCRBV3S1A0A5B6 CXorf67-201ENST00000342995 1929 ntAPPRIS P1 BASIC17.41■□□□□ 0.38
TCRBV3S1A0A5B6 SEMA6C-210ENST00000621728 1918 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
TCRBV3S1A0A5B6 MTHFD1L-211ENST00000611279 3475 ntAPPRIS ALT1 TSL 5 BASIC17.41■□□□□ 0.38
TCRBV3S1A0A5B6 NFATC1-206ENST00000542384 2142 ntAPPRIS ALT2 TSL 1 (best) BASIC17.41■□□□□ 0.38
TCRBV3S1A0A5B6 PITX3-201ENST00000370002 1391 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
TCRBV3S1A0A5B6 NUDT16-201ENST00000502852 1552 ntTSL 2 BASIC17.4■□□□□ 0.38
TCRBV3S1A0A5B6 DCBLD2-201ENST00000326840 6122 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
TCRBV3S1A0A5B6 FOSB-209ENST00000590335 2170 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
TCRBV3S1A0A5B6 ATPAF1-214ENST00000576409 4158 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
TCRBV3S1A0A5B6 RUSC2-202ENST00000455600 5636 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
TCRBV3S1A0A5B6 TOR2A-205ENST00000463577 2211 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
TCRBV3S1A0A5B6 GPANK1-204ENST00000375900 1814 ntAPPRIS P1 TSL 2 BASIC17.4■□□□□ 0.38
TCRBV3S1A0A5B6 LMF1-212ENST00000568897 1603 ntTSL 5 BASIC17.4■□□□□ 0.38
TCRBV3S1A0A5B6 RAPSN-205ENST00000529341 1408 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
TCRBV3S1A0A5B6 SKOR1-202ENST00000380035 3675 ntAPPRIS ALT2 TSL 5 BASIC17.4■□□□□ 0.38
TCRBV3S1A0A5B6 TBXAS1-210ENST00000458722 2057 ntTSL 2 BASIC17.4■□□□□ 0.38
TCRBV3S1A0A5B6 AC022211.2-201ENST00000585075 2527 ntBASIC17.4■□□□□ 0.38
TCRBV3S1A0A5B6 PDLIM2-207ENST00000409417 1487 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
TCRBV3S1A0A5B6 GCC2-AS1-201ENST00000322353 558 ntTSL 2 BASIC17.4■□□□□ 0.38
TCRBV3S1A0A5B6 CABP2-202ENST00000353903 789 ntAPPRIS P1 TSL 5 BASIC17.4■□□□□ 0.38
TCRBV3S1A0A5B6 WWTR1-201ENST00000360632 2103 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
TCRBV3S1A0A5B6 C1orf50-201ENST00000372525 996 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
TCRBV3S1A0A5B6 TNFRSF18-203ENST00000379268 1179 ntAPPRIS ALT2 TSL 1 (best) BASIC17.4■□□□□ 0.38
TCRBV3S1A0A5B6 METTL26-203ENST00000397664 604 ntTSL 2 BASIC17.4■□□□□ 0.38
TCRBV3S1A0A5B6 CAMKMT-202ENST00000402247 665 ntTSL 2 BASIC17.4■□□□□ 0.38
TCRBV3S1A0A5B6 P2RX2-207ENST00000449132 1113 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
TCRBV3S1A0A5B6 SEC23A-AS1-201ENST00000557350 500 ntTSL 3 BASIC17.4■□□□□ 0.38
TCRBV3S1A0A5B6 PNMA8A-203ENST00000602246 572 ntAPPRIS ALT2 TSL 4 BASIC17.4■□□□□ 0.38
TCRBV3S1A0A5B6 MFSD14C-203ENST00000602917 786 ntAPPRIS P5 TSL 1 (best) BASIC17.4■□□□□ 0.38
TCRBV3S1A0A5B6 ACBD4-216ENST00000619916 1276 ntTSL 5 BASIC17.4■□□□□ 0.38
TCRBV3S1A0A5B6 MARK4-211ENST00000622871 1147 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
TCRBV3S1A0A5B6 PTP4A3-201ENST00000329397 2785 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
TCRBV3S1A0A5B6 TPD52L1-213ENST00000534000 2356 ntAPPRIS P3 TSL 1 (best) BASIC17.4■□□□□ 0.38
TCRBV3S1A0A5B6 RNF128-201ENST00000255499 2817 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
TCRBV3S1A0A5B6 PPIF-201ENST00000225174 2190 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
TCRBV3S1A0A5B6 CD24-201ENST00000606017 2180 ntAPPRIS P3 TSL 1 (best) BASIC17.4■□□□□ 0.38
TCRBV3S1A0A5B6 ZCCHC23-201ENST00000500526 1951 ntTSL 2 BASIC17.4■□□□□ 0.38
TCRBV3S1A0A5B6 CD58-203ENST00000457047 1328 ntAPPRIS ALT2 TSL 1 (best) BASIC17.4■□□□□ 0.38
TCRBV3S1A0A5B6 ODF2-204ENST00000372814 2249 ntTSL 2 BASIC17.4■□□□□ 0.38
TCRBV3S1A0A5B6 APEH-202ENST00000438011 2249 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
TCRBV3S1A0A5B6 RIN1-201ENST00000311320 2693 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
TCRBV3S1A0A5B6 TNIP1-208ENST00000520931 2680 ntAPPRIS ALT2 TSL 1 (best) BASIC17.4■□□□□ 0.38
TCRBV3S1A0A5B6 ING5-201ENST00000313552 5196 ntAPPRIS P3 TSL 1 (best) BASIC17.4■□□□□ 0.38
TCRBV3S1A0A5B6 CYP46A1-202ENST00000380228 1597 ntTSL 2 BASIC17.4■□□□□ 0.38
TCRBV3S1A0A5B6 STYXL1-208ENST00000451157 1570 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
TCRBV3S1A0A5B6 PTPA-203ENST00000348141 2737 ntTSL 5 BASIC17.4■□□□□ 0.38
TCRBV3S1A0A5B6 PTPA-207ENST00000393370 2737 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
TCRBV3S1A0A5B6 ZNF623-201ENST00000458270 2733 ntAPPRIS ALT2 TSL 1 (best) BASIC17.4■□□□□ 0.38
TCRBV3S1A0A5B6 EHMT1-204ENST00000462484 2707 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
TCRBV3S1A0A5B6 EPHA10-201ENST00000319637 2050 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
TCRBV3S1A0A5B6 LINC01569-202ENST00000573042 2093 ntTSL 2 BASIC17.4■□□□□ 0.38
TCRBV3S1A0A5B6 SNX11-203ENST00000452859 1601 ntTSL 2 BASIC17.39■□□□□ 0.38
TCRBV3S1A0A5B6 NF2-208ENST00000403435 2568 ntTSL 5 BASIC17.39■□□□□ 0.38
TCRBV3S1A0A5B6 CCDC154-202ENST00000409671 2561 ntAPPRIS ALT2 TSL 1 (best) BASIC17.39■□□□□ 0.38
TCRBV3S1A0A5B6 EGR2-203ENST00000439032 2844 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.38
TCRBV3S1A0A5B6 ZNF746-202ENST00000458143 3797 ntAPPRIS ALT2 TSL 2 BASIC17.39■□□□□ 0.38
TCRBV3S1A0A5B6 KCNQ5-203ENST00000355635 6623 ntAPPRIS ALT1 TSL 5 BASIC17.39■□□□□ 0.38
TCRBV3S1A0A5B6 ARID1A-201ENST00000324856 8577 ntAPPRIS P3 TSL 1 (best) BASIC17.39■□□□□ 0.37
TCRBV3S1A0A5B6 CRTAC1-201ENST00000309155 1946 ntAPPRIS ALT2 TSL 1 (best) BASIC17.39■□□□□ 0.37
TCRBV3S1A0A5B6 SEMA6C-209ENST00000613223 1950 ntTSL 5 BASIC17.39■□□□□ 0.37
TCRBV3S1A0A5B6 MED9-201ENST00000268711 2228 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
TCRBV3S1A0A5B6 RBPJL-201ENST00000343694 2489 ntAPPRIS P3 TSL 1 (best) BASIC17.39■□□□□ 0.37
TCRBV3S1A0A5B6 TRIM11-202ENST00000366699 2511 ntTSL 2 BASIC17.39■□□□□ 0.37
TCRBV3S1A0A5B6 SAAL1-204ENST00000529318 1503 ntAPPRIS ALT1 TSL 5 BASIC17.39■□□□□ 0.37
TCRBV3S1A0A5B6 SMARCC1-201ENST00000254480 6375 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
TCRBV3S1A0A5B6 NUDT22-201ENST00000279206 1094 ntAPPRIS P3 TSL 1 (best) BASIC17.39■□□□□ 0.37
TCRBV3S1A0A5B6 ATP5C1-202ENST00000356708 1163 ntAPPRIS ALT1 TSL 1 (best) BASIC17.39■□□□□ 0.37
TCRBV3S1A0A5B6 NUDT22-204ENST00000441250 986 ntAPPRIS ALT2 TSL 5 BASIC17.39■□□□□ 0.37
TCRBV3S1A0A5B6 AC120498.8-201ENST00000614275 531 ntBASIC17.39■□□□□ 0.37
TCRBV3S1A0A5B6 PTGER3-208ENST00000370932 1841 ntAPPRIS ALT2 TSL 5 BASIC17.39■□□□□ 0.37
TCRBV3S1A0A5B6 SERGEF-201ENST00000265965 1566 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
TCRBV3S1A0A5B6 AUNIP-201ENST00000374298 2116 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
TCRBV3S1A0A5B6 NME9-203ENST00000383180 2133 ntTSL 2 BASIC17.39■□□□□ 0.37
TCRBV3S1A0A5B6 MAPKAP1-208ENST00000394063 2977 ntTSL 5 BASIC17.39■□□□□ 0.37
TCRBV3S1A0A5B6 MRPL10-203ENST00000414011 1622 ntTSL 3 BASIC17.39■□□□□ 0.37
TCRBV3S1A0A5B6 PPP2R5B-201ENST00000164133 2745 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
TCRBV3S1A0A5B6 HIBCH-201ENST00000359678 1939 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
TCRBV3S1A0A5B6 MUM1-216ENST00000627377 2235 ntAPPRIS ALT2 TSL 5 BASIC17.39■□□□□ 0.37
TCRBV3S1A0A5B6 ERBB2-205ENST00000578199 2526 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
TCRBV3S1A0A5B6 HCK-210ENST00000629881 1969 ntAPPRIS ALT2 TSL 2 BASIC17.39■□□□□ 0.37
TCRBV3S1A0A5B6 AC104809.2-201ENST00000418218 2274 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
TCRBV3S1A0A5B6 DNAJA3-202ENST00000355296 2591 ntAPPRIS ALT1 TSL 1 (best) BASIC17.38■□□□□ 0.37
TCRBV3S1A0A5B6 TMEM177-204ENST00000424086 1738 ntAPPRIS P1 TSL 2 BASIC17.38■□□□□ 0.37
TCRBV3S1A0A5B6 AC090340.1-201ENST00000620778 4980 ntBASIC17.38■□□□□ 0.37
TCRBV3S1A0A5B6 ZNF48-206ENST00000622647 2695 ntTSL 4 BASIC17.38■□□□□ 0.37
TCRBV3S1A0A5B6 FARP1-242ENST00000627049 5103 ntTSL 5 BASIC17.38■□□□□ 0.37
TCRBV3S1A0A5B6 EWSR1-222ENST00000629659 2446 ntTSL 5 BASIC17.38■□□□□ 0.37
TCRBV3S1A0A5B6 PODNL1-203ENST00000538371 1826 ntAPPRIS ALT2 TSL 2 BASIC17.38■□□□□ 0.37
TCRBV3S1A0A5B6 RNPS1-205ENST00000561718 1806 ntTSL 3 BASIC17.38■□□□□ 0.37
TCRBV3S1A0A5B6 ACADVL-205ENST00000543245 2227 ntTSL 2 BASIC17.38■□□□□ 0.37
Retrieved 100 of 98,524 protein–RNA pairs in 22.7 ms