Protein–RNA interactions for Protein: A0A0B4J237

TRAV8-2, T-cell receptor alpha variable 8-2 (Fragment), humanhuman

Predictions only

Length 113 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV8-2A0A0B4J237 INS-203ENST00000397262 639 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
TRAV8-2A0A0B4J237 ABCC5-211ENST00000446941 883 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
TRAV8-2A0A0B4J237 BABAM1-202ENST00000447614 930 ntAPPRIS ALT2 TSL 5 BASIC14.15□□□□□ -0.14
TRAV8-2A0A0B4J237 AC019257.1-201ENST00000517676 557 ntTSL 5 BASIC14.15□□□□□ -0.14
TRAV8-2A0A0B4J237 CNOT8-224ENST00000523698 862 ntTSL 2 BASIC14.15□□□□□ -0.14
TRAV8-2A0A0B4J237 C14orf144-202ENST00000555282 854 ntTSL 3 BASIC14.15□□□□□ -0.14
TRAV8-2A0A0B4J237 AC026271.3-201ENST00000571884 352 ntBASIC14.15□□□□□ -0.14
TRAV8-2A0A0B4J237 AF186192.3-201ENST00000583427 947 ntBASIC14.15□□□□□ -0.14
TRAV8-2A0A0B4J237 AC020922.2-201ENST00000596786 359 ntTSL 4 BASIC14.15□□□□□ -0.14
TRAV8-2A0A0B4J237 AL031985.4-201ENST00000642138 673 ntBASIC14.15□□□□□ -0.14
TRAV8-2A0A0B4J237 ACSF2-201ENST00000300441 2235 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
TRAV8-2A0A0B4J237 NARFL-201ENST00000251588 2112 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
TRAV8-2A0A0B4J237 XYLT2-203ENST00000507602 2107 ntTSL 2 BASIC14.15□□□□□ -0.14
TRAV8-2A0A0B4J237 ASB7-203ENST00000558747 2133 ntTSL 5 BASIC14.15□□□□□ -0.14
TRAV8-2A0A0B4J237 TRIP4-201ENST00000261884 2045 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
TRAV8-2A0A0B4J237 C6orf118-201ENST00000230301 1812 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
TRAV8-2A0A0B4J237 EXOSC3-201ENST00000327304 1806 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
TRAV8-2A0A0B4J237 CLN3-204ENST00000357857 1720 ntTSL 2 BASIC14.15□□□□□ -0.14
TRAV8-2A0A0B4J237 TFCP2-205ENST00000549867 1727 ntTSL 5 BASIC14.15□□□□□ -0.14
TRAV8-2A0A0B4J237 KRT81-202ENST00000615839 1505 ntAPPRIS ALT2 TSL 5 BASIC14.15□□□□□ -0.14
TRAV8-2A0A0B4J237 FAM99A-201ENST00000382167 1432 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
TRAV8-2A0A0B4J237 STMN3-202ENST00000540534 2351 ntTSL 2 BASIC14.15□□□□□ -0.14
TRAV8-2A0A0B4J237 KCNQ2-218ENST00000629676 2399 ntTSL 5 BASIC14.15□□□□□ -0.14
TRAV8-2A0A0B4J237 NADK-201ENST00000341426 3235 ntAPPRIS P3 TSL 2 BASIC14.15□□□□□ -0.14
TRAV8-2A0A0B4J237 SERPINF2-202ENST00000382061 2265 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
TRAV8-2A0A0B4J237 SERPINE2-201ENST00000258405 2195 ntAPPRIS P3 TSL 1 (best) BASIC14.15□□□□□ -0.15
TRAV8-2A0A0B4J237 POLR2C-201ENST00000219252 2057 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
TRAV8-2A0A0B4J237 FAM219B-204ENST00000563119 2721 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
TRAV8-2A0A0B4J237 SEC14L2-215ENST00000617837 2632 ntTSL 2 BASIC14.14□□□□□ -0.15
TRAV8-2A0A0B4J237 FGFR3-202ENST00000340107 4293 ntAPPRIS ALT2 TSL 5 BASIC14.14□□□□□ -0.15
TRAV8-2A0A0B4J237 PLA2R1-202ENST00000392771 5160 ntAPPRIS ALT2 TSL 1 (best) BASIC14.14□□□□□ -0.15
TRAV8-2A0A0B4J237 RAP1GAP-204ENST00000374761 3318 ntTSL 5 BASIC14.14□□□□□ -0.15
TRAV8-2A0A0B4J237 C3orf58-201ENST00000315691 4346 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
TRAV8-2A0A0B4J237 CBS-203ENST00000398158 2453 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
TRAV8-2A0A0B4J237 CBSL-206ENST00000624406 2453 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
TRAV8-2A0A0B4J237 SPERT-202ENST00000378966 1842 ntAPPRIS ALT2 TSL 1 (best) BASIC14.14□□□□□ -0.15
TRAV8-2A0A0B4J237 HLA-DRB1-201ENST00000360004 1229 ntAPPRIS P1 BASIC14.14□□□□□ -0.15
TRAV8-2A0A0B4J237 CHPF-202ENST00000373891 1079 ntTSL 2 BASIC14.14□□□□□ -0.15
TRAV8-2A0A0B4J237 UHRF2-202ENST00000381373 802 ntTSL 3 BASIC14.14□□□□□ -0.15
TRAV8-2A0A0B4J237 RAB29-203ENST00000414729 1157 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
TRAV8-2A0A0B4J237 SNX5-213ENST00000486039 602 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
TRAV8-2A0A0B4J237 RARRES2P10-201ENST00000564312 460 ntBASIC14.14□□□□□ -0.15
TRAV8-2A0A0B4J237 CKBP1-201ENST00000565489 1086 ntBASIC14.14□□□□□ -0.15
TRAV8-2A0A0B4J237 AC130371.2-201ENST00000619443 611 ntBASIC14.14□□□□□ -0.15
TRAV8-2A0A0B4J237 SLC35A2-213ENST00000635015 1008 ntTSL 2 BASIC14.14□□□□□ -0.15
TRAV8-2A0A0B4J237 LINC00094-205ENST00000603928 5722 ntAPPRIS ALT2 TSL 2 BASIC14.14□□□□□ -0.15
TRAV8-2A0A0B4J237 CCDC3-201ENST00000378825 2731 ntAPPRIS P3 TSL 1 (best) BASIC14.14□□□□□ -0.15
TRAV8-2A0A0B4J237 ASNS-206ENST00000437628 1638 ntTSL 2 BASIC14.14□□□□□ -0.15
TRAV8-2A0A0B4J237 FBLIM1-202ENST00000375766 3695 ntAPPRIS P1 TSL 2 BASIC14.14□□□□□ -0.15
TRAV8-2A0A0B4J237 SATB1-201ENST00000338745 7810 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
TRAV8-2A0A0B4J237 NOL4L-211ENST00000621426 6577 ntAPPRIS P2 TSL 5 BASIC14.14□□□□□ -0.15
TRAV8-2A0A0B4J237 CD248-201ENST00000311330 2558 ntAPPRIS P1 BASIC14.14□□□□□ -0.15
TRAV8-2A0A0B4J237 IPMK-201ENST00000373935 6133 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
TRAV8-2A0A0B4J237 ZNFX1-203ENST00000371754 5235 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
TRAV8-2A0A0B4J237 ANKRD10-201ENST00000267339 2495 ntAPPRIS P1 TSL 2 BASIC14.14□□□□□ -0.15
TRAV8-2A0A0B4J237 ECE1-203ENST00000374893 2484 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
TRAV8-2A0A0B4J237 ASCC2-202ENST00000397771 2823 ntAPPRIS P1 TSL 5 BASIC14.14□□□□□ -0.15
TRAV8-2A0A0B4J237 C19orf48-202ENST00000391812 1666 ntAPPRIS P1 TSL 2 BASIC14.14□□□□□ -0.15
TRAV8-2A0A0B4J237 PPP2R2C-206ENST00000507294 1667 ntTSL 2 BASIC14.14□□□□□ -0.15
TRAV8-2A0A0B4J237 PRELID3A-209ENST00000592149 2001 ntTSL 2 BASIC14.14□□□□□ -0.15
TRAV8-2A0A0B4J237 SLC35E4-201ENST00000343605 2714 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
TRAV8-2A0A0B4J237 ARL5A-201ENST00000295087 5326 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
TRAV8-2A0A0B4J237 DUS1L-202ENST00000354321 2151 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
TRAV8-2A0A0B4J237 BMP2K-208ENST00000628286 3848 ntAPPRIS ALT2 TSL 5 BASIC14.13□□□□□ -0.15
TRAV8-2A0A0B4J237 PTTG1IP-203ENST00000397887 2413 ntTSL 4 BASIC14.13□□□□□ -0.15
TRAV8-2A0A0B4J237 CGRRF1-201ENST00000216420 2057 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
TRAV8-2A0A0B4J237 DAPK1-207ENST00000469640 5899 ntTSL 5 BASIC14.13□□□□□ -0.15
TRAV8-2A0A0B4J237 LINC00466-207ENST00000634725 1736 ntTSL 5 BASIC14.13□□□□□ -0.15
TRAV8-2A0A0B4J237 PCDHA5-202ENST00000529859 5218 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
TRAV8-2A0A0B4J237 FAM213B-205ENST00000444521 2827 ntAPPRIS ALT2 TSL 2 BASIC14.13□□□□□ -0.15
TRAV8-2A0A0B4J237 SEMA3B-209ENST00000456560 2221 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
TRAV8-2A0A0B4J237 ZNF655-202ENST00000320583 1601 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
TRAV8-2A0A0B4J237 HAUS4-218ENST00000555986 1626 ntTSL 5 BASIC14.13□□□□□ -0.15
TRAV8-2A0A0B4J237 NTRK2-207ENST00000376214 5608 ntAPPRIS P3 TSL 5 BASIC14.13□□□□□ -0.15
TRAV8-2A0A0B4J237 AC011506.1-201ENST00000474329 610 ntBASIC14.13□□□□□ -0.15
TRAV8-2A0A0B4J237 CHAC1-203ENST00000487220 853 ntTSL 3 BASIC14.13□□□□□ -0.15
TRAV8-2A0A0B4J237 TMEM235-204ENST00000551068 1187 ntAPPRIS P1 TSL 5 BASIC14.13□□□□□ -0.15
TRAV8-2A0A0B4J237 FLT3LG-211ENST00000600429 984 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
TRAV8-2A0A0B4J237 AC010531.6-201ENST00000602282 401 ntTSL 2 BASIC14.13□□□□□ -0.15
TRAV8-2A0A0B4J237 AC073195.1-201ENST00000607241 877 ntBASIC14.13□□□□□ -0.15
TRAV8-2A0A0B4J237 MARK4-211ENST00000622871 1147 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
TRAV8-2A0A0B4J237 PER3-203ENST00000377541 1524 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
TRAV8-2A0A0B4J237 PTP4A1-201ENST00000370651 5088 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
TRAV8-2A0A0B4J237 DNAJC8-201ENST00000263697 1759 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
TRAV8-2A0A0B4J237 SELENOF-207ENST00000611507 1785 ntTSL 5 BASIC14.13□□□□□ -0.15
TRAV8-2A0A0B4J237 BIRC8-201ENST00000426466 2026 ntAPPRIS P1 BASIC14.13□□□□□ -0.15
TRAV8-2A0A0B4J237 NUTM2F-202ENST00000341207 2516 ntAPPRIS ALT2 TSL 5 BASIC14.13□□□□□ -0.15
TRAV8-2A0A0B4J237 NUTM2G-202ENST00000372322 2516 ntAPPRIS ALT2 TSL 5 BASIC14.13□□□□□ -0.15
TRAV8-2A0A0B4J237 SLC35F3-201ENST00000366617 2762 ntAPPRIS ALT1 TSL 1 (best) BASIC14.13□□□□□ -0.15
TRAV8-2A0A0B4J237 TRAK2-202ENST00000430254 1436 ntTSL 2 BASIC14.13□□□□□ -0.15
TRAV8-2A0A0B4J237 AKIP1-207ENST00000529876 1421 ntTSL 2 BASIC14.13□□□□□ -0.15
TRAV8-2A0A0B4J237 ACBD4-215ENST00000592162 1684 ntTSL 5 BASIC14.13□□□□□ -0.15
TRAV8-2A0A0B4J237 RPS6KA1-204ENST00000374168 3186 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
TRAV8-2A0A0B4J237 LRP3-201ENST00000253193 3807 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
TRAV8-2A0A0B4J237 KRT6A-201ENST00000330722 2310 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
TRAV8-2A0A0B4J237 TCTN1-225ENST00000551590 2309 ntAPPRIS ALT2 TSL 1 (best) BASIC14.13□□□□□ -0.15
TRAV8-2A0A0B4J237 GGNBP2-210ENST00000611219 2315 ntTSL 2 BASIC14.13□□□□□ -0.15
TRAV8-2A0A0B4J237 RBM7-201ENST00000375490 2064 ntAPPRIS ALT1 TSL 1 (best) BASIC14.13□□□□□ -0.15
TRAV8-2A0A0B4J237 AL357033.4-201ENST00000617703 1807 ntBASIC14.13□□□□□ -0.15
TRAV8-2A0A0B4J237 ZFP3-201ENST00000318833 5206 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Retrieved 100 of 98,524 protein–RNA pairs in 46.2 ms