Protein–RNA interactions for Protein: A0A0B4J1Z2

IGKV1D-43, Immunoglobulin kappa variable 1D-43, humanhuman

Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IGKV1D-43A0A0B4J1Z2 SLC39A2-203ENST00000554422 1259 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
IGKV1D-43A0A0B4J1Z2 CR769767.2-201ENST00000622735 460 ntBASIC16.43■□□□□ 0.22
IGKV1D-43A0A0B4J1Z2 GLDC-219ENST00000640208 420 ntTSL 2 BASIC16.43■□□□□ 0.22
IGKV1D-43A0A0B4J1Z2 PDE9A-209ENST00000398227 1606 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
IGKV1D-43A0A0B4J1Z2 MAPK9-208ENST00000455781 4336 ntAPPRIS ALT1 TSL 2 BASIC16.43■□□□□ 0.22
IGKV1D-43A0A0B4J1Z2 CLASRP-201ENST00000221455 2234 ntAPPRIS P2 TSL 1 (best) BASIC16.43■□□□□ 0.22
IGKV1D-43A0A0B4J1Z2 EFEMP2-210ENST00000528176 1504 ntTSL 5 BASIC16.43■□□□□ 0.22
IGKV1D-43A0A0B4J1Z2 HIPK1-207ENST00000369561 3777 ntTSL 5 BASIC16.43■□□□□ 0.22
IGKV1D-43A0A0B4J1Z2 GSTZ1-204ENST00000393734 1424 ntTSL 5 BASIC16.43■□□□□ 0.22
IGKV1D-43A0A0B4J1Z2 TMEM110-MUSTN1-202ENST00000504329 1405 ntAPPRIS P1 TSL 5 BASIC16.43■□□□□ 0.22
IGKV1D-43A0A0B4J1Z2 KRT8P50-201ENST00000562022 1438 ntBASIC16.43■□□□□ 0.22
IGKV1D-43A0A0B4J1Z2 CYP2D7-201ENST00000358097 1655 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
IGKV1D-43A0A0B4J1Z2 STX11-201ENST00000367568 1926 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
IGKV1D-43A0A0B4J1Z2 KANK3-201ENST00000330915 2787 ntAPPRIS P2 TSL 1 (best) BASIC16.43■□□□□ 0.22
IGKV1D-43A0A0B4J1Z2 VPS37B-201ENST00000267202 3028 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
IGKV1D-43A0A0B4J1Z2 EIF2B5-201ENST00000273783 2655 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
IGKV1D-43A0A0B4J1Z2 ZNF419-205ENST00000424930 2323 ntAPPRIS ALT2 TSL 1 (best) BASIC16.42■□□□□ 0.22
IGKV1D-43A0A0B4J1Z2 SCYL1-203ENST00000420247 2583 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
IGKV1D-43A0A0B4J1Z2 ZNF114-206ENST00000600687 1742 ntAPPRIS P1 TSL 5 BASIC16.42■□□□□ 0.22
IGKV1D-43A0A0B4J1Z2 AC027097.1-202ENST00000592201 1954 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
IGKV1D-43A0A0B4J1Z2 ACSF2-201ENST00000300441 2235 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
IGKV1D-43A0A0B4J1Z2 RNF121-201ENST00000361756 2625 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
IGKV1D-43A0A0B4J1Z2 GPT-202ENST00000394955 1885 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
IGKV1D-43A0A0B4J1Z2 CCKBR-203ENST00000525462 2138 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
IGKV1D-43A0A0B4J1Z2 INO80E-207ENST00000563197 2103 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
IGKV1D-43A0A0B4J1Z2 AC034236.2-201ENST00000606662 1610 ntBASIC16.42■□□□□ 0.22
IGKV1D-43A0A0B4J1Z2 SOD2-206ENST00000452684 2045 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
IGKV1D-43A0A0B4J1Z2 PRSS23-209ENST00000533902 2043 ntTSL 4 BASIC16.42■□□□□ 0.22
IGKV1D-43A0A0B4J1Z2 KCNIP4-205ENST00000382152 1767 ntTSL 5 BASIC16.42■□□□□ 0.22
IGKV1D-43A0A0B4J1Z2 TSPY14P-201ENST00000303979 915 ntBASIC16.42■□□□□ 0.22
IGKV1D-43A0A0B4J1Z2 CXADR-204ENST00000400166 1080 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
IGKV1D-43A0A0B4J1Z2 RNF144A-AS1-204ENST00000437589 618 ntTSL 2 BASIC16.42■□□□□ 0.22
IGKV1D-43A0A0B4J1Z2 TSPY17P-201ENST00000450329 467 ntBASIC16.42■□□□□ 0.22
IGKV1D-43A0A0B4J1Z2 AL451069.1-201ENST00000455414 634 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
IGKV1D-43A0A0B4J1Z2 LINC00595-207ENST00000476909 792 ntTSL 2 BASIC16.42■□□□□ 0.22
IGKV1D-43A0A0B4J1Z2 CFL2-205ENST00000555765 632 ntTSL 2 BASIC16.42■□□□□ 0.22
IGKV1D-43A0A0B4J1Z2 RABAC1-210ENST00000601891 628 ntTSL 3 BASIC16.42■□□□□ 0.22
IGKV1D-43A0A0B4J1Z2 AC020913.2-201ENST00000601929 629 ntTSL 5 BASIC16.42■□□□□ 0.22
IGKV1D-43A0A0B4J1Z2 MYC-208ENST00000641036 567 ntBASIC16.42■□□□□ 0.22
IGKV1D-43A0A0B4J1Z2 ARID3C-201ENST00000378909 1411 ntAPPRIS P1 TSL 2 BASIC16.42■□□□□ 0.22
IGKV1D-43A0A0B4J1Z2 SYT8-202ENST00000381968 1424 ntAPPRIS P2 TSL 5 BASIC16.42■□□□□ 0.22
IGKV1D-43A0A0B4J1Z2 CD276-201ENST00000318424 2738 ntTSL 5 BASIC16.42■□□□□ 0.22
IGKV1D-43A0A0B4J1Z2 PRDM12-201ENST00000253008 2476 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
IGKV1D-43A0A0B4J1Z2 B4GALT4-202ENST00000393765 2459 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
IGKV1D-43A0A0B4J1Z2 GAREM2-201ENST00000401533 4161 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
IGKV1D-43A0A0B4J1Z2 HARBI1-201ENST00000326737 1967 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
IGKV1D-43A0A0B4J1Z2 APAF1-210ENST00000551964 5444 ntAPPRIS P4 TSL 1 (best) BASIC16.42■□□□□ 0.22
IGKV1D-43A0A0B4J1Z2 GTPBP2-202ENST00000307126 2933 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
IGKV1D-43A0A0B4J1Z2 CALHM2-201ENST00000260743 1859 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
IGKV1D-43A0A0B4J1Z2 CD164L2-202ENST00000374027 1457 ntAPPRIS P3 TSL 1 (best) BASIC16.42■□□□□ 0.22
IGKV1D-43A0A0B4J1Z2 HEXB-207ENST00000511181 2021 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
IGKV1D-43A0A0B4J1Z2 SIGIRR-220ENST00000531205 1649 ntTSL 2 BASIC16.41■□□□□ 0.22
IGKV1D-43A0A0B4J1Z2 OBSL1-204ENST00000404537 5841 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
IGKV1D-43A0A0B4J1Z2 NAT8L-201ENST00000331662 5571 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
IGKV1D-43A0A0B4J1Z2 GSDMD-201ENST00000262580 1762 ntAPPRIS P2 TSL 1 (best) BASIC16.41■□□□□ 0.22
IGKV1D-43A0A0B4J1Z2 CDK10-202ENST00000353379 1798 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
IGKV1D-43A0A0B4J1Z2 AC135776.1-201ENST00000319817 2481 ntBASIC16.41■□□□□ 0.22
IGKV1D-43A0A0B4J1Z2 KCNH2-203ENST00000430723 2648 ntTSL 5 BASIC16.41■□□□□ 0.22
IGKV1D-43A0A0B4J1Z2 SLC25A43-201ENST00000217909 2783 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
IGKV1D-43A0A0B4J1Z2 STK25-203ENST00000403346 2210 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
IGKV1D-43A0A0B4J1Z2 GPC2-201ENST00000292377 2532 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
IGKV1D-43A0A0B4J1Z2 RXRB-202ENST00000374685 2846 ntAPPRIS ALT1 TSL 1 (best) BASIC16.41■□□□□ 0.22
IGKV1D-43A0A0B4J1Z2 KRAS-201ENST00000256078 1119 ntAPPRIS P4 TSL 1 (best) BASIC16.41■□□□□ 0.22
IGKV1D-43A0A0B4J1Z2 OR10H2-201ENST00000305899 1041 ntAPPRIS P1 BASIC16.41■□□□□ 0.22
IGKV1D-43A0A0B4J1Z2 TTC22-201ENST00000371274 2149 ntTSL 2 BASIC16.41■□□□□ 0.22
IGKV1D-43A0A0B4J1Z2 COL11A2-204ENST00000395194 1194 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
IGKV1D-43A0A0B4J1Z2 CCR12P-201ENST00000446203 998 ntBASIC16.41■□□□□ 0.22
IGKV1D-43A0A0B4J1Z2 REPIN1-210ENST00000482680 1029 ntTSL 2 BASIC16.41■□□□□ 0.22
IGKV1D-43A0A0B4J1Z2 C2orf69P3-201ENST00000565542 1120 ntBASIC16.41■□□□□ 0.22
IGKV1D-43A0A0B4J1Z2 AL513523.10-201ENST00000623024 1186 ntAPPRIS P1 TSL 5 BASIC16.41■□□□□ 0.22
IGKV1D-43A0A0B4J1Z2 EHMT1-204ENST00000462484 2707 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
IGKV1D-43A0A0B4J1Z2 TCF25-225ENST00000614813 2047 ntTSL 5 BASIC16.41■□□□□ 0.22
IGKV1D-43A0A0B4J1Z2 ENTPD6-202ENST00000360031 2766 ntAPPRIS ALT2 TSL 1 (best) BASIC16.41■□□□□ 0.22
IGKV1D-43A0A0B4J1Z2 NEU4-203ENST00000404257 2352 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
IGKV1D-43A0A0B4J1Z2 NUTM2F-202ENST00000341207 2516 ntAPPRIS ALT2 TSL 5 BASIC16.41■□□□□ 0.22
IGKV1D-43A0A0B4J1Z2 NUTM2G-202ENST00000372322 2516 ntAPPRIS ALT2 TSL 5 BASIC16.41■□□□□ 0.22
IGKV1D-43A0A0B4J1Z2 PDE4A-202ENST00000344979 2579 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
IGKV1D-43A0A0B4J1Z2 AC107464.1-203ENST00000468356 2120 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
IGKV1D-43A0A0B4J1Z2 RRN3-205ENST00000563559 2128 ntTSL 5 BASIC16.4■□□□□ 0.22
IGKV1D-43A0A0B4J1Z2 EMC8-201ENST00000253457 1962 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
IGKV1D-43A0A0B4J1Z2 LRRC27-201ENST00000344079 1809 ntAPPRIS ALT2 TSL 2 BASIC16.4■□□□□ 0.22
IGKV1D-43A0A0B4J1Z2 LTBP4-201ENST00000204005 5032 ntAPPRIS ALT2 TSL 1 (best) BASIC16.4■□□□□ 0.22
IGKV1D-43A0A0B4J1Z2 STEAP1B-201ENST00000404369 1515 ntAPPRIS ALT2 TSL 1 (best) BASIC16.4■□□□□ 0.22
IGKV1D-43A0A0B4J1Z2 CHRM4-201ENST00000433765 1511 ntAPPRIS P1 BASIC16.4■□□□□ 0.22
IGKV1D-43A0A0B4J1Z2 UBE2QL1-201ENST00000399816 4317 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
IGKV1D-43A0A0B4J1Z2 CSPG5-202ENST00000383738 4161 ntAPPRIS ALT2 TSL 1 (best) BASIC16.4■□□□□ 0.22
IGKV1D-43A0A0B4J1Z2 ESPNP-201ENST00000270691 2015 ntBASIC16.4■□□□□ 0.22
IGKV1D-43A0A0B4J1Z2 TMEM177-204ENST00000424086 1738 ntAPPRIS P1 TSL 2 BASIC16.4■□□□□ 0.22
IGKV1D-43A0A0B4J1Z2 EGFL6-202ENST00000380602 2385 ntAPPRIS ALT2 TSL 1 (best) BASIC16.4■□□□□ 0.22
IGKV1D-43A0A0B4J1Z2 MMP23A-201ENST00000234610 1017 ntBASIC16.4■□□□□ 0.22
IGKV1D-43A0A0B4J1Z2 SSNA1-201ENST00000322310 896 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
IGKV1D-43A0A0B4J1Z2 KRT17P2-202ENST00000326333 1174 ntTSL 2 BASIC16.4■□□□□ 0.22
IGKV1D-43A0A0B4J1Z2 TRAPPC3-204ENST00000373166 1265 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
IGKV1D-43A0A0B4J1Z2 SUSD3-205ENST00000617293 1076 ntAPPRIS ALT2 TSL 3 BASIC16.4■□□□□ 0.22
IGKV1D-43A0A0B4J1Z2 EBLN3P-205ENST00000629870 958 ntTSL 3 BASIC16.4■□□□□ 0.22
IGKV1D-43A0A0B4J1Z2 AC116562.4-202ENST00000641738 218 ntBASIC16.4■□□□□ 0.22
IGKV1D-43A0A0B4J1Z2 GTF2IRD2-207ENST00000625377 1910 ntTSL 5 BASIC16.4■□□□□ 0.22
IGKV1D-43A0A0B4J1Z2 ECHDC1-214ENST00000474289 2443 ntAPPRIS P3 TSL 5 BASIC16.4■□□□□ 0.22
IGKV1D-43A0A0B4J1Z2 SLC35A3-217ENST00000639807 2767 ntTSL 5 BASIC16.4■□□□□ 0.22
IGKV1D-43A0A0B4J1Z2 OGFOD2-205ENST00000454694 1488 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
Retrieved 100 of 98,524 protein–RNA pairs in 36.1 ms