Protein–RNA interactions for Protein: Q9Y5P4

COL4A3BP, Collagen type IV alpha-3-binding protein, humanhuman

Predictions only

Length 624 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A3BPQ9Y5P4 NEK4P2-201ENST00000580004 1012 ntBASIC20.81■□□□□ 0.92
COL4A3BPQ9Y5P4 NUDT16L1-203ENST00000586252 922 ntTSL 3 BASIC20.81■□□□□ 0.92
COL4A3BPQ9Y5P4 PRLHR-202ENST00000636925 1275 ntAPPRIS P1 BASIC20.81■□□□□ 0.92
COL4A3BPQ9Y5P4 PLA2G7-201ENST00000274793 1882 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
COL4A3BPQ9Y5P4 CPZ-201ENST00000315782 2136 ntAPPRIS P3 TSL 1 (best) BASIC20.81■□□□□ 0.92
COL4A3BPQ9Y5P4 AP001351.1-201ENST00000501397 1865 ntTSL 2 BASIC20.81■□□□□ 0.92
COL4A3BPQ9Y5P4 ZNF302-214ENST00000613363 2893 ntAPPRIS ALT2 TSL 4 BASIC20.81■□□□□ 0.92
COL4A3BPQ9Y5P4 EI24-201ENST00000278903 2455 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
COL4A3BPQ9Y5P4 UMOD-201ENST00000302509 2477 ntAPPRIS P3 TSL 5 BASIC20.81■□□□□ 0.92
COL4A3BPQ9Y5P4 ZNF211-204ENST00000347302 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC20.81■□□□□ 0.92
COL4A3BPQ9Y5P4 BAIAP2-204ENST00000428708 2095 ntAPPRIS ALT2 TSL 1 (best) BASIC20.81■□□□□ 0.92
COL4A3BPQ9Y5P4 ARAP1-AS2-201ENST00000500163 1824 ntTSL 2 BASIC20.81■□□□□ 0.92
COL4A3BPQ9Y5P4 C19orf25-203ENST00000585675 1837 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
COL4A3BPQ9Y5P4 NTRK1-206ENST00000524377 2432 ntAPPRIS P3 TSL 1 (best) BASIC20.8■□□□□ 0.92
COL4A3BPQ9Y5P4 MFSD10-205ENST00000507555 1573 ntTSL 5 BASIC20.8■□□□□ 0.92
COL4A3BPQ9Y5P4 CTSH-201ENST00000220166 2190 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
COL4A3BPQ9Y5P4 CHST2-201ENST00000309575 4582 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
COL4A3BPQ9Y5P4 CKMT1A-202ENST00000413453 1911 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
COL4A3BPQ9Y5P4 SEMA3B-210ENST00000611067 2292 ntAPPRIS ALT2 TSL 1 (best) BASIC20.8■□□□□ 0.92
COL4A3BPQ9Y5P4 ZNF787-202ENST00000587279 1657 ntTSL 2 BASIC20.8■□□□□ 0.92
COL4A3BPQ9Y5P4 ENOPH1-201ENST00000273920 2025 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
COL4A3BPQ9Y5P4 FDXR-217ENST00000582944 1766 ntTSL 2 BASIC20.8■□□□□ 0.92
COL4A3BPQ9Y5P4 IL4I1-202ENST00000391826 1863 ntAPPRIS ALT2 TSL 1 (best) BASIC20.8■□□□□ 0.92
COL4A3BPQ9Y5P4 PHF12-202ENST00000332830 4759 ntAPPRIS P1 TSL 2 BASIC20.8■□□□□ 0.92
COL4A3BPQ9Y5P4 COBL-202ENST00000395540 2332 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
COL4A3BPQ9Y5P4 ACADS-201ENST00000242592 1950 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
COL4A3BPQ9Y5P4 HSD11B1L-205ENST00000422535 730 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
COL4A3BPQ9Y5P4 HDAC11-AS1-201ENST00000424112 515 ntTSL 2 BASIC20.8■□□□□ 0.92
COL4A3BPQ9Y5P4 ELAC2-212ENST00000578071 579 ntTSL 4 BASIC20.8■□□□□ 0.92
COL4A3BPQ9Y5P4 CACNA1A-218ENST00000635895 8657 ntAPPRIS ALT2 TSL 5 BASIC20.8■□□□□ 0.92
COL4A3BPQ9Y5P4 CACNA1A-257ENST00000638009 8665 ntAPPRIS ALT2 TSL 1 (best) BASIC20.8■□□□□ 0.92
COL4A3BPQ9Y5P4 EIF4E3-201ENST00000295612 2764 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
COL4A3BPQ9Y5P4 MTDH-203ENST00000519934 2184 ntTSL 5 BASIC20.8■□□□□ 0.92
COL4A3BPQ9Y5P4 ARSA-203ENST00000395619 1824 ntAPPRIS P1 TSL 5 BASIC20.8■□□□□ 0.92
COL4A3BPQ9Y5P4 MRPL3-202ENST00000425847 1457 ntTSL 2 BASIC20.8■□□□□ 0.92
COL4A3BPQ9Y5P4 NUTM2D-201ENST00000381697 3290 ntAPPRIS P5 TSL 1 (best) BASIC20.8■□□□□ 0.92
COL4A3BPQ9Y5P4 PLIN5-201ENST00000381848 2470 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
COL4A3BPQ9Y5P4 NUDT16-201ENST00000502852 1552 ntTSL 2 BASIC20.8■□□□□ 0.92
COL4A3BPQ9Y5P4 TNFSF9-201ENST00000245817 1665 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
COL4A3BPQ9Y5P4 PRSS33-201ENST00000293851 1694 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
COL4A3BPQ9Y5P4 NFYC-AS1-201ENST00000606277 1687 ntBASIC20.8■□□□□ 0.92
COL4A3BPQ9Y5P4 TMEM104-202ENST00000417024 1781 ntTSL 2 BASIC20.8■□□□□ 0.92
COL4A3BPQ9Y5P4 PSAP-205ENST00000610929 1969 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
COL4A3BPQ9Y5P4 BLOC1S3-201ENST00000433642 2601 ntAPPRIS P1 TSL 2 BASIC20.79■□□□□ 0.92
COL4A3BPQ9Y5P4 MAFG-201ENST00000357736 5040 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
COL4A3BPQ9Y5P4 TMEM250-201ENST00000418388 2823 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
COL4A3BPQ9Y5P4 NAF1-202ENST00000422287 1604 ntAPPRIS ALT2 TSL 1 (best) BASIC20.79■□□□□ 0.92
COL4A3BPQ9Y5P4 HEXDC-203ENST00000577944 1820 ntTSL 5 BASIC20.79■□□□□ 0.92
COL4A3BPQ9Y5P4 RASSF1-210ENST00000616212 1842 ntTSL 2 BASIC20.79■□□□□ 0.92
COL4A3BPQ9Y5P4 COBL-210ENST00000632460 1941 ntTSL 5 BASIC20.79■□□□□ 0.92
COL4A3BPQ9Y5P4 GGCT-202ENST00000275428 1173 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
COL4A3BPQ9Y5P4 PHOSPHO2-201ENST00000359744 1125 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
COL4A3BPQ9Y5P4 GUCA2B-201ENST00000372581 597 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
COL4A3BPQ9Y5P4 MCCD1P1-208ENST00000445732 328 ntBASIC20.79■□□□□ 0.92
COL4A3BPQ9Y5P4 AC092647.4-201ENST00000457211 535 ntBASIC20.79■□□□□ 0.92
COL4A3BPQ9Y5P4 MED9-202ENST00000580462 565 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
COL4A3BPQ9Y5P4 BVES-AS1-203ENST00000580511 853 ntTSL 5 BASIC20.79■□□□□ 0.92
COL4A3BPQ9Y5P4 C17orf62-221ENST00000581196 668 ntTSL 4 BASIC20.79■□□□□ 0.92
COL4A3BPQ9Y5P4 UQCR11-201ENST00000585671 753 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
COL4A3BPQ9Y5P4 EPB41L4B-201ENST00000374557 4006 ntAPPRIS ALT2 TSL 1 (best) BASIC20.79■□□□□ 0.92
COL4A3BPQ9Y5P4 HOXC13-201ENST00000243056 2423 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
COL4A3BPQ9Y5P4 OGFOD2-205ENST00000454694 1488 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
COL4A3BPQ9Y5P4 ATP6V1G2-205ENST00000303892 1588 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
COL4A3BPQ9Y5P4 NPR3-204ENST00000434067 2715 ntTSL 5 BASIC20.79■□□□□ 0.92
COL4A3BPQ9Y5P4 MATN4-201ENST00000353917 1657 ntTSL 5 BASIC20.79■□□□□ 0.92
COL4A3BPQ9Y5P4 UVSSA-207ENST00000511216 2927 ntAPPRIS P2 TSL 1 (best) BASIC20.79■□□□□ 0.92
COL4A3BPQ9Y5P4 ACTG1-201ENST00000331925 1994 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
COL4A3BPQ9Y5P4 ADAP1-205ENST00000449296 2093 ntTSL 2 BASIC20.79■□□□□ 0.92
COL4A3BPQ9Y5P4 AGTR1-201ENST00000349243 2356 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
COL4A3BPQ9Y5P4 LTBP3-217ENST00000530785 2461 ntTSL 2 BASIC20.79■□□□□ 0.92
COL4A3BPQ9Y5P4 TRPC1-203ENST00000476941 3061 ntAPPRIS ALT2 TSL 1 (best) BASIC20.79■□□□□ 0.92
COL4A3BPQ9Y5P4 MTMR9LP-203ENST00000426597 1545 ntBASIC20.78■□□□□ 0.92
COL4A3BPQ9Y5P4 JPT1-203ENST00000409753 1605 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
COL4A3BPQ9Y5P4 TRPM4-213ENST00000599628 1829 ntTSL 2 BASIC20.78■□□□□ 0.92
COL4A3BPQ9Y5P4 ZXDB-201ENST00000374888 5894 ntAPPRIS P1 BASIC20.78■□□□□ 0.92
COL4A3BPQ9Y5P4 PRODH-215ENST00000610940 2405 ntAPPRIS P3 TSL 1 (best) BASIC20.78■□□□□ 0.92
COL4A3BPQ9Y5P4 SLC38A10-201ENST00000288439 2708 ntAPPRIS P3 TSL 1 (best) BASIC20.78■□□□□ 0.92
COL4A3BPQ9Y5P4 NBPF9-209ENST00000621645 5632 ntAPPRIS ALT2 TSL 2 BASIC20.78■□□□□ 0.92
COL4A3BPQ9Y5P4 ADAMTS9-202ENST00000459780 2871 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
COL4A3BPQ9Y5P4 UAP1-204ENST00000367926 2294 ntAPPRIS P3 TSL 1 (best) BASIC20.78■□□□□ 0.92
COL4A3BPQ9Y5P4 DCLK2-207ENST00000635524 2153 ntAPPRIS ALT2 TSL 5 BASIC20.78■□□□□ 0.92
COL4A3BPQ9Y5P4 AC036111.1-201ENST00000533973 1582 ntBASIC20.78■□□□□ 0.92
COL4A3BPQ9Y5P4 WIPI1-202ENST00000546360 1575 ntTSL 2 BASIC20.78■□□□□ 0.92
COL4A3BPQ9Y5P4 PLCB1-204ENST00000404098 1260 ntTSL 3 BASIC20.78■□□□□ 0.92
COL4A3BPQ9Y5P4 LY6E-210ENST00000521182 1079 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
COL4A3BPQ9Y5P4 MRPL46-202ENST00000558531 1002 ntTSL 2 BASIC20.78■□□□□ 0.92
COL4A3BPQ9Y5P4 DCTN5-208ENST00000568589 772 ntTSL 2 BASIC20.78■□□□□ 0.92
COL4A3BPQ9Y5P4 AC087388.1-201ENST00000571370 1112 ntBASIC20.78■□□□□ 0.92
COL4A3BPQ9Y5P4 C16orf74-207ENST00000602914 761 ntAPPRIS ALT2 TSL 2 BASIC20.78■□□□□ 0.92
COL4A3BPQ9Y5P4 SMARCC2-203ENST00000394023 4271 ntAPPRIS ALT2 TSL 1 (best) BASIC20.78■□□□□ 0.92
COL4A3BPQ9Y5P4 C3orf70-201ENST00000335012 5901 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
COL4A3BPQ9Y5P4 RIMKLB-202ENST00000357529 5830 ntAPPRIS P1 TSL 5 BASIC20.78■□□□□ 0.92
COL4A3BPQ9Y5P4 RAX2-201ENST00000555633 2414 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
COL4A3BPQ9Y5P4 ANKRD13D-201ENST00000308440 2219 ntTSL 2 BASIC20.78■□□□□ 0.92
COL4A3BPQ9Y5P4 ZNF420-201ENST00000304239 1945 ntTSL 2 BASIC20.78■□□□□ 0.92
COL4A3BPQ9Y5P4 KANSL1-202ENST00000432791 5343 ntAPPRIS P3 TSL 1 (best) BASIC20.78■□□□□ 0.92
COL4A3BPQ9Y5P4 KHDC1-202ENST00000370384 1430 ntAPPRIS ALT2 TSL 1 (best) BASIC20.78■□□□□ 0.92
COL4A3BPQ9Y5P4 SPAG16-209ENST00000447990 1330 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
COL4A3BPQ9Y5P4 SLC6A9-201ENST00000357730 2168 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
COL4A3BPQ9Y5P4 TCAIM-203ENST00000396078 2178 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
Retrieved 100 of 98,524 protein–RNA pairs in 49.5 ms