Protein–RNA interactions for Protein: Q9Y587

AP4S1, AP-4 complex subunit sigma-1, humanhuman

Predictions only

Length 144 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP4S1Q9Y587 LRRC20-203ENST00000358141 2924 ntTSL 2 BASIC17.6■□□□□ 0.41
AP4S1Q9Y587 RASL10B-201ENST00000603017 3205 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
AP4S1Q9Y587 PYY-201ENST00000360085 1053 ntAPPRIS P2 TSL 1 (best) BASIC17.6■□□□□ 0.41
AP4S1Q9Y587 NCF1B-202ENST00000432102 930 ntTSL 2 BASIC17.6■□□□□ 0.41
AP4S1Q9Y587 LTB-211ENST00000446745 853 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
AP4S1Q9Y587 LEF1-AS1-203ENST00000507799 459 ntTSL 3 BASIC17.6■□□□□ 0.41
AP4S1Q9Y587 AC068385.1-201ENST00000533218 409 ntTSL 3 BASIC17.6■□□□□ 0.41
AP4S1Q9Y587 AC005829.2-201ENST00000571422 1056 ntBASIC17.6■□□□□ 0.41
AP4S1Q9Y587 PTCRA-204ENST00000616441 1125 ntAPPRIS ALT2 TSL 2 BASIC17.6■□□□□ 0.41
AP4S1Q9Y587 TM7SF2-202ENST00000345348 1490 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
AP4S1Q9Y587 RABEPK-204ENST00000394125 1466 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
AP4S1Q9Y587 MTMR9LP-203ENST00000426597 1545 ntBASIC17.6■□□□□ 0.41
AP4S1Q9Y587 MFSD10-205ENST00000507555 1573 ntTSL 5 BASIC17.6■□□□□ 0.41
AP4S1Q9Y587 RGS20-203ENST00000344277 1667 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
AP4S1Q9Y587 RPS6KB2-201ENST00000312629 1733 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
AP4S1Q9Y587 ENC1-205ENST00000510316 5381 ntTSL 2 BASIC17.6■□□□□ 0.41
AP4S1Q9Y587 C1orf159-205ENST00000421241 1841 ntAPPRIS P3 TSL 2 BASIC17.6■□□□□ 0.41
AP4S1Q9Y587 TAPBP-233ENST00000426633 1888 ntAPPRIS P4 TSL 1 (best) BASIC17.6■□□□□ 0.41
AP4S1Q9Y587 FBXL18-203ENST00000453700 1932 ntAPPRIS ALT2 TSL 1 (best) BASIC17.6■□□□□ 0.41
AP4S1Q9Y587 HECTD2-203ENST00000371681 2175 ntTSL 2 BASIC17.6■□□□□ 0.41
AP4S1Q9Y587 AC108860.2-201ENST00000562760 2183 ntBASIC17.6■□□□□ 0.41
AP4S1Q9Y587 GGT5-201ENST00000263112 2334 ntAPPRIS ALT2 TSL 1 (best) BASIC17.6■□□□□ 0.41
AP4S1Q9Y587 TADA3-202ENST00000343450 2554 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
AP4S1Q9Y587 CBSL-202ENST00000617706 2563 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
AP4S1Q9Y587 C2CD3-213ENST00000539061 2722 ntTSL 2 BASIC17.6■□□□□ 0.41
AP4S1Q9Y587 LINC00094-205ENST00000603928 5722 ntAPPRIS ALT2 TSL 2 BASIC17.6■□□□□ 0.41
AP4S1Q9Y587 GAREM2-202ENST00000407684 5138 ntTSL 2 BASIC17.59■□□□□ 0.41
AP4S1Q9Y587 CHRNA5-201ENST00000299565 3623 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
AP4S1Q9Y587 CLCN2-205ENST00000457512 2820 ntAPPRIS ALT2 TSL 2 BASIC17.59■□□□□ 0.41
AP4S1Q9Y587 DIDO1-203ENST00000370366 2383 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
AP4S1Q9Y587 AC079922.2-201ENST00000457336 2022 ntTSL 2 BASIC17.59■□□□□ 0.41
AP4S1Q9Y587 NAT9-201ENST00000357814 1875 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
AP4S1Q9Y587 POR-209ENST00000439269 1858 ntTSL 2 BASIC17.59■□□□□ 0.41
AP4S1Q9Y587 NECTIN3-211ENST00000493615 1876 ntAPPRIS ALT2 TSL 2 BASIC17.59■□□□□ 0.41
AP4S1Q9Y587 CAMK2G-205ENST00000372765 1822 ntTSL 5 BASIC17.59■□□□□ 0.41
AP4S1Q9Y587 FAM110A-203ENST00000381939 1737 ntAPPRIS P1 TSL 3 BASIC17.59■□□□□ 0.41
AP4S1Q9Y587 BMPER-201ENST00000297161 5031 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
AP4S1Q9Y587 SNX24-211ENST00000513881 1563 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
AP4S1Q9Y587 HSPB2-C11orf52-202ENST00000534100 1521 ntAPPRIS ALT2 TSL 2 BASIC17.59■□□□□ 0.41
AP4S1Q9Y587 ZHX3-212ENST00000558993 1528 ntTSL 5 BASIC17.59■□□□□ 0.41
AP4S1Q9Y587 CT47B1-201ENST00000371311 1328 ntAPPRIS P1 TSL 5 BASIC17.59■□□□□ 0.41
AP4S1Q9Y587 CLPSL2-201ENST00000360454 488 ntAPPRIS ALT2 TSL 1 (best) BASIC17.59■□□□□ 0.41
AP4S1Q9Y587 GDNF-203ENST00000381826 778 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
AP4S1Q9Y587 ART5-202ENST00000397067 1154 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
AP4S1Q9Y587 GDNF-204ENST00000427982 856 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
AP4S1Q9Y587 KRT18P16-201ENST00000510337 1294 ntBASIC17.59■□□□□ 0.41
AP4S1Q9Y587 AC073896.1-201ENST00000549318 937 ntAPPRIS P1 TSL 5 BASIC17.59■□□□□ 0.41
AP4S1Q9Y587 MYO19-221ENST00000620640 1186 ntTSL 2 BASIC17.59■□□□□ 0.41
AP4S1Q9Y587 SH2B1-216ENST00000618521 2935 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
AP4S1Q9Y587 WIZ-201ENST00000263381 5695 ntAPPRIS P2 TSL 2 BASIC17.59■□□□□ 0.41
AP4S1Q9Y587 RABEP1-202ENST00000537505 5365 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
AP4S1Q9Y587 PLD3-207ENST00000409735 2140 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
AP4S1Q9Y587 KIFC3-203ENST00000445690 3379 ntAPPRIS ALT2 TSL 1 (best) BASIC17.59■□□□□ 0.41
AP4S1Q9Y587 NDN-201ENST00000331837 1931 ntAPPRIS P1 BASIC17.59■□□□□ 0.41
AP4S1Q9Y587 TRA2A-212ENST00000621813 1931 ntAPPRIS ALT2 TSL 2 BASIC17.59■□□□□ 0.41
AP4S1Q9Y587 RARA-206ENST00000425707 3041 ntTSL 1 (best) BASIC17.58■□□□□ 0.41
AP4S1Q9Y587 DMPK-201ENST00000291270 2787 ntAPPRIS P3 TSL 5 BASIC17.58■□□□□ 0.41
AP4S1Q9Y587 MINK1-202ENST00000355280 4961 ntAPPRIS P4 TSL 1 (best) BASIC17.58■□□□□ 0.41
AP4S1Q9Y587 RCC2P6-201ENST00000526625 1557 ntBASIC17.58■□□□□ 0.41
AP4S1Q9Y587 KLC2-203ENST00000394066 2591 ntTSL 2 BASIC17.58■□□□□ 0.41
AP4S1Q9Y587 CEBPG-201ENST00000284000 4109 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
AP4S1Q9Y587 GLRB-201ENST00000264428 3126 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
AP4S1Q9Y587 DBN1-201ENST00000292385 3072 ntAPPRIS P4 TSL 1 (best) BASIC17.58■□□□□ 0.4
AP4S1Q9Y587 DIP2A-204ENST00000457905 3044 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
AP4S1Q9Y587 FAM72A-203ENST00000367129 676 ntTSL 3 BASIC17.58■□□□□ 0.4
AP4S1Q9Y587 RER1-204ENST00000378518 522 ntTSL 3 BASIC17.58■□□□□ 0.4
AP4S1Q9Y587 LSM12P1-201ENST00000411836 588 ntBASIC17.58■□□□□ 0.4
AP4S1Q9Y587 ZBTB11-202ENST00000461821 2115 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
AP4S1Q9Y587 FAM72A-205ENST00000468509 629 ntTSL 5 BASIC17.58■□□□□ 0.4
AP4S1Q9Y587 AC016065.1-203ENST00000523225 1017 ntTSL 3 BASIC17.58■□□□□ 0.4
AP4S1Q9Y587 CDKN2A-210ENST00000530628 748 ntAPPRIS P1 TSL 5 BASIC17.58■□□□□ 0.4
AP4S1Q9Y587 GOSR2-208ENST00000573224 1115 ntTSL 5 BASIC17.58■□□□□ 0.4
AP4S1Q9Y587 NTF6G-201ENST00000591094 616 ntBASIC17.58■□□□□ 0.4
AP4S1Q9Y587 PNLDC1-207ENST00000610273 1940 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
AP4S1Q9Y587 TNRC18P3-201ENST00000441896 2691 ntBASIC17.58■□□□□ 0.4
AP4S1Q9Y587 CERS6-201ENST00000305747 7217 ntAPPRIS P3 TSL 2 BASIC17.58■□□□□ 0.4
AP4S1Q9Y587 BIN1-208ENST00000376113 1832 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
AP4S1Q9Y587 KCNQ1-201ENST00000155840 3245 ntAPPRIS P2 TSL 1 (best) BASIC17.58■□□□□ 0.4
AP4S1Q9Y587 APOLD1-202ENST00000356591 4646 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
AP4S1Q9Y587 OGFOD3-202ENST00000329197 1652 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
AP4S1Q9Y587 MAP4K2-202ENST00000377350 2931 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
AP4S1Q9Y587 PSMD8-207ENST00000592035 1581 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
AP4S1Q9Y587 GABRB1-201ENST00000295454 2143 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
AP4S1Q9Y587 ARFGAP2-229ENST00000627920 2613 ntTSL 2 BASIC17.57■□□□□ 0.4
AP4S1Q9Y587 C19orf67-203ENST00000548523 1427 ntAPPRIS P2 TSL 5 BASIC17.57■□□□□ 0.4
AP4S1Q9Y587 CDC25A-202ENST00000351231 3663 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
AP4S1Q9Y587 DIO3OS-212ENST00000557661 1937 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
AP4S1Q9Y587 OIP5-201ENST00000220514 1236 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
AP4S1Q9Y587 NDUFB2-201ENST00000247866 504 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
AP4S1Q9Y587 PRR25-201ENST00000301698 1209 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
AP4S1Q9Y587 TUBB8P6-201ENST00000436895 1288 ntBASIC17.57■□□□□ 0.4
AP4S1Q9Y587 RPS2P52-201ENST00000469610 820 ntBASIC17.57■□□□□ 0.4
AP4S1Q9Y587 AC073111.3-201ENST00000478789 635 ntAPPRIS P1 TSL 3 BASIC17.57■□□□□ 0.4
AP4S1Q9Y587 REPIN1-210ENST00000482680 1029 ntTSL 2 BASIC17.57■□□□□ 0.4
AP4S1Q9Y587 EGFEM1P-209ENST00000502332 728 ntTSL 3 BASIC17.57■□□□□ 0.4
AP4S1Q9Y587 BEAN1-AS1-201ENST00000564618 533 ntTSL 4 BASIC17.57■□□□□ 0.4
AP4S1Q9Y587 ZNF561-AS1-205ENST00000588765 579 ntTSL 4 BASIC17.57■□□□□ 0.4
AP4S1Q9Y587 AC005181.1-201ENST00000604782 1256 ntBASIC17.57■□□□□ 0.4
AP4S1Q9Y587 LRMDA-215ENST00000611255 1040 ntAPPRIS ALT2 TSL 5 BASIC17.57■□□□□ 0.4
AP4S1Q9Y587 PDLIM3-202ENST00000284770 1766 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
Retrieved 100 of 98,524 protein–RNA pairs in 22.9 ms