Protein–RNA interactions for Protein: Q9UNS2

COPS3, COP9 signalosome complex subunit 3, humanhuman

Predictions only

Length 423 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COPS3Q9UNS2 AC108693.2-201ENST00000492981 303 ntTSL 3 BASIC16.61■□□□□ 0.25
COPS3Q9UNS2 C14orf28-204ENST00000557112 1097 ntTSL 5 BASIC16.61■□□□□ 0.25
COPS3Q9UNS2 LINC01578-208ENST00000557147 490 ntTSL 3 BASIC16.61■□□□□ 0.25
COPS3Q9UNS2 ANAPC11-219ENST00000583839 499 ntAPPRIS P1 TSL 2 BASIC16.61■□□□□ 0.25
COPS3Q9UNS2 KLHL31-201ENST00000370905 5743 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
COPS3Q9UNS2 SLC25A51-202ENST00000377716 1691 ntAPPRIS P1 TSL 3 BASIC16.61■□□□□ 0.25
COPS3Q9UNS2 AL355987.1-201ENST00000435202 2420 ntAPPRIS P1 TSL 2 BASIC16.61■□□□□ 0.25
COPS3Q9UNS2 AC127496.1-202ENST00000573602 2091 ntTSL 2 BASIC16.61■□□□□ 0.25
COPS3Q9UNS2 HSD11B1L-221ENST00000583928 1319 ntTSL 5 BASIC16.61■□□□□ 0.25
COPS3Q9UNS2 DCLK1-203ENST00000379892 2101 ntTSL 5 BASIC16.61■□□□□ 0.25
COPS3Q9UNS2 C19orf54-203ENST00000470681 2521 ntTSL 2 BASIC16.61■□□□□ 0.25
COPS3Q9UNS2 ZBTB45-202ENST00000594051 2541 ntAPPRIS P1 TSL 2 BASIC16.61■□□□□ 0.25
COPS3Q9UNS2 CSF1-203ENST00000369801 1364 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
COPS3Q9UNS2 EDA-208ENST00000524573 1381 ntAPPRIS ALT1 TSL 1 (best) BASIC16.61■□□□□ 0.25
COPS3Q9UNS2 KCNIP4-205ENST00000382152 1767 ntTSL 5 BASIC16.61■□□□□ 0.25
COPS3Q9UNS2 KCNK3-201ENST00000302909 6162 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
COPS3Q9UNS2 EIF5-201ENST00000216554 5945 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
COPS3Q9UNS2 XKR8-201ENST00000373884 2692 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
COPS3Q9UNS2 TDRKH-207ENST00000458431 2768 ntAPPRIS P2 TSL 1 (best) BASIC16.6■□□□□ 0.25
COPS3Q9UNS2 GPR137-204ENST00000438980 1596 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
COPS3Q9UNS2 TRIM33-202ENST00000369543 3457 ntAPPRIS ALT2 TSL 1 (best) BASIC16.6■□□□□ 0.25
COPS3Q9UNS2 HTATSF1-204ENST00000535601 3019 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
COPS3Q9UNS2 AC011270.2-201ENST00000624293 2550 ntBASIC16.6■□□□□ 0.25
COPS3Q9UNS2 MAP4K4-202ENST00000324219 7526 ntTSL 5 BASIC16.6■□□□□ 0.25
COPS3Q9UNS2 SLC9A6-201ENST00000370695 4725 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
COPS3Q9UNS2 CDK10-202ENST00000353379 1798 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
COPS3Q9UNS2 TTC9B-201ENST00000311308 843 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
COPS3Q9UNS2 SPATA2L-202ENST00000335360 1001 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
COPS3Q9UNS2 NME6-209ENST00000442597 757 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
COPS3Q9UNS2 RNA5SP413-201ENST00000516373 109 ntBASIC16.6■□□□□ 0.25
COPS3Q9UNS2 AC090192.1-201ENST00000517740 490 ntBASIC16.6■□□□□ 0.25
COPS3Q9UNS2 AC140479.4-201ENST00000561715 463 ntTSL 4 BASIC16.6■□□□□ 0.25
COPS3Q9UNS2 CDIPT-204ENST00000563415 1047 ntTSL 3 BASIC16.6■□□□□ 0.25
COPS3Q9UNS2 AC009052.1-201ENST00000567090 298 ntTSL 3 BASIC16.6■□□□□ 0.25
COPS3Q9UNS2 L34079.3-201ENST00000600242 546 ntTSL 4 BASIC16.6■□□□□ 0.25
COPS3Q9UNS2 TMEM191B-203ENST00000613597 366 ntAPPRIS ALT2 TSL 5 BASIC16.6■□□□□ 0.25
COPS3Q9UNS2 ZDHHC8P1-204ENST00000433168 2309 ntTSL 2 BASIC16.6■□□□□ 0.25
COPS3Q9UNS2 HOXB8-201ENST00000239144 1823 ntAPPRIS P2 TSL 2 BASIC16.6■□□□□ 0.25
COPS3Q9UNS2 BICRA-201ENST00000396720 5739 ntAPPRIS P2 TSL 5 BASIC16.6■□□□□ 0.25
COPS3Q9UNS2 RELL2-201ENST00000297164 2520 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
COPS3Q9UNS2 KMT2E-207ENST00000476671 2523 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
COPS3Q9UNS2 AJUBA-202ENST00000361265 2569 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
COPS3Q9UNS2 DTX2-206ENST00000430490 2623 ntAPPRIS P3 TSL 1 (best) BASIC16.6■□□□□ 0.25
COPS3Q9UNS2 GPR75-201ENST00000394705 2115 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
COPS3Q9UNS2 TMEM198B-203ENST00000482378 2230 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
COPS3Q9UNS2 ZNF655-202ENST00000320583 1601 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
COPS3Q9UNS2 PDZD3-202ENST00000355547 2252 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
COPS3Q9UNS2 UBQLN4-201ENST00000368309 3576 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
COPS3Q9UNS2 PNKP-207ENST00000596014 1665 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
COPS3Q9UNS2 CD1E-205ENST00000368160 1727 ntAPPRIS ALT2 TSL 1 (best) BASIC16.59■□□□□ 0.25
COPS3Q9UNS2 NOMO3-201ENST00000263012 3911 ntAPPRIS ALT2 TSL 1 (best) BASIC16.59■□□□□ 0.25
COPS3Q9UNS2 THOP1-205ENST00000586677 1872 ntTSL 2 BASIC16.59■□□□□ 0.25
COPS3Q9UNS2 TBP-202ENST00000392092 1903 ntAPPRIS P3 TSL 1 (best) BASIC16.59■□□□□ 0.25
COPS3Q9UNS2 CADPS2-201ENST00000313070 6065 ntTSL 5 BASIC16.59■□□□□ 0.25
COPS3Q9UNS2 SOD2-206ENST00000452684 2045 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
COPS3Q9UNS2 TULP1-208ENST00000614066 2084 ntAPPRIS ALT2 TSL 5 BASIC16.59■□□□□ 0.25
COPS3Q9UNS2 KRTCAP3-201ENST00000288873 872 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
COPS3Q9UNS2 AIDA-202ENST00000355727 1072 ntTSL 5 BASIC16.59■□□□□ 0.25
COPS3Q9UNS2 SERF2-207ENST00000409614 582 ntTSL 2 BASIC16.59■□□□□ 0.25
COPS3Q9UNS2 PTPA-216ENST00000432651 857 ntTSL 2 BASIC16.59■□□□□ 0.25
COPS3Q9UNS2 ZNF436-AS1-202ENST00000437367 606 ntTSL 2 BASIC16.59■□□□□ 0.25
COPS3Q9UNS2 APTR-205ENST00000447009 902 ntTSL 2 BASIC16.59■□□□□ 0.25
COPS3Q9UNS2 AC026366.1-201ENST00000488803 879 ntBASIC16.59■□□□□ 0.25
COPS3Q9UNS2 ROPN1L-202ENST00000503804 1291 ntAPPRIS P1 TSL 2 BASIC16.59■□□□□ 0.25
COPS3Q9UNS2 ALKAL1-202ENST00000523939 536 ntAPPRIS ALT2 TSL 1 (best) BASIC16.59■□□□□ 0.25
COPS3Q9UNS2 CLN6-207ENST00000566347 981 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
COPS3Q9UNS2 NRG2-205ENST00000361474 3020 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
COPS3Q9UNS2 AL139384.1-201ENST00000612143 3047 ntBASIC16.59■□□□□ 0.25
COPS3Q9UNS2 BACE1-203ENST00000428381 1333 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
COPS3Q9UNS2 ASB18-201ENST00000409749 1401 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
COPS3Q9UNS2 CACNA2D1-203ENST00000423588 1429 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
COPS3Q9UNS2 C19orf25-201ENST00000427685 1410 ntTSL 2 BASIC16.59■□□□□ 0.25
COPS3Q9UNS2 HOXC13-AS-201ENST00000512916 1408 ntTSL 3 BASIC16.59■□□□□ 0.25
COPS3Q9UNS2 ETNK2-202ENST00000367201 2431 ntAPPRIS ALT2 TSL 2 BASIC16.59■□□□□ 0.25
COPS3Q9UNS2 PER3-203ENST00000377541 1524 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
COPS3Q9UNS2 PDLIM7-203ENST00000359895 1567 ntAPPRIS ALT2 TSL 1 (best) BASIC16.59■□□□□ 0.25
COPS3Q9UNS2 GAL3ST1-206ENST00000406955 1635 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
COPS3Q9UNS2 TES-201ENST00000358204 2782 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
COPS3Q9UNS2 ISY1-201ENST00000273541 1704 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
COPS3Q9UNS2 PSTK-201ENST00000368887 1705 ntAPPRIS P2 TSL 1 (best) BASIC16.59■□□□□ 0.25
COPS3Q9UNS2 FAM110A-203ENST00000381939 1737 ntAPPRIS P1 TSL 3 BASIC16.59■□□□□ 0.25
COPS3Q9UNS2 ABCC5-204ENST00000392579 1848 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
COPS3Q9UNS2 EXTL3-201ENST00000220562 6483 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
COPS3Q9UNS2 CYP7B1-201ENST00000310193 2202 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
COPS3Q9UNS2 AC135776.1-201ENST00000319817 2481 ntBASIC16.58■□□□□ 0.25
COPS3Q9UNS2 ZZZ3-201ENST00000370798 2468 ntTSL 1 (best) BASIC16.58■□□□□ 0.25
COPS3Q9UNS2 GNE-201ENST00000377902 2565 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
COPS3Q9UNS2 FAM66C-209ENST00000544214 2623 ntTSL 1 (best) BASIC16.58■□□□□ 0.25
COPS3Q9UNS2 B3GALT5-206ENST00000615480 2617 ntAPPRIS P1 TSL 2 BASIC16.58■□□□□ 0.25
COPS3Q9UNS2 MDFIC-201ENST00000257724 4598 ntTSL 1 (best) BASIC16.58■□□□□ 0.25
COPS3Q9UNS2 PTTG1IP-201ENST00000330938 2760 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
COPS3Q9UNS2 HNRNPLL-202ENST00000358367 2779 ntTSL 5 BASIC16.58■□□□□ 0.25
COPS3Q9UNS2 PANX1-202ENST00000436171 2750 ntAPPRIS ALT1 TSL 1 (best) BASIC16.58■□□□□ 0.25
COPS3Q9UNS2 TAL1-201ENST00000294339 5001 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
COPS3Q9UNS2 MEN1-203ENST00000337652 3162 ntAPPRIS P3 TSL 5 BASIC16.58■□□□□ 0.24
COPS3Q9UNS2 PGM5-202ENST00000396396 3338 ntAPPRIS P1 TSL 2 BASIC16.58■□□□□ 0.24
COPS3Q9UNS2 RGCC-201ENST00000379359 960 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
COPS3Q9UNS2 GTF2A2-203ENST00000396061 758 ntAPPRIS P1 TSL 2 BASIC16.58■□□□□ 0.24
COPS3Q9UNS2 AC239809.2-201ENST00000415381 517 ntBASIC16.58■□□□□ 0.24
COPS3Q9UNS2 KRT16P5-201ENST00000455284 522 ntBASIC16.58■□□□□ 0.24
Retrieved 100 of 98,524 protein–RNA pairs in 41.6 ms