Protein–RNA interactions for Protein: Q9ULB4

CDH9, Cadherin-9, humanhuman

Predictions only

Length 789 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH9Q9ULB4 LONRF3-202ENST00000371628 2550 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
CDH9Q9ULB4 ZNF787-202ENST00000587279 1657 ntTSL 2 BASIC19.66■□□□□ 0.74
CDH9Q9ULB4 RAB7A-201ENST00000265062 2244 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
CDH9Q9ULB4 ROR1-201ENST00000371079 5832 ntAPPRIS P2 TSL 1 (best) BASIC19.66■□□□□ 0.74
CDH9Q9ULB4 C20orf196-201ENST00000303142 1154 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
CDH9Q9ULB4 HLA-F-217ENST00000334668 1283 ntAPPRIS ALT2 BASIC19.66■□□□□ 0.74
CDH9Q9ULB4 SMYD3-204ENST00000403792 1209 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
CDH9Q9ULB4 PCED1CP-201ENST00000419887 785 ntBASIC19.66■□□□□ 0.74
CDH9Q9ULB4 HLA-F-220ENST00000434407 884 ntBASIC19.66■□□□□ 0.74
CDH9Q9ULB4 SPDYE13P-201ENST00000445314 798 ntBASIC19.66■□□□□ 0.74
CDH9Q9ULB4 VENTXP5-201ENST00000523979 775 ntBASIC19.66■□□□□ 0.74
CDH9Q9ULB4 IFI27L1-206ENST00000554562 571 ntTSL 3 BASIC19.66■□□□□ 0.74
CDH9Q9ULB4 AC034238.1-212ENST00000596137 723 ntTSL 5 BASIC19.66■□□□□ 0.74
CDH9Q9ULB4 GFOD2-207ENST00000602855 819 ntTSL 3 BASIC19.66■□□□□ 0.74
CDH9Q9ULB4 AL136038.4-201ENST00000603606 1261 ntBASIC19.66■□□□□ 0.74
CDH9Q9ULB4 CLN6-214ENST00000636314 442 ntTSL 3 BASIC19.66■□□□□ 0.74
CDH9Q9ULB4 AP000550.4-202ENST00000639755 178 ntBASIC19.66■□□□□ 0.74
CDH9Q9ULB4 PFKFB3-219ENST00000640683 2311 ntTSL 5 BASIC19.66■□□□□ 0.74
CDH9Q9ULB4 AL391807.1-203ENST00000604392 2365 ntBASIC19.66■□□□□ 0.74
CDH9Q9ULB4 NEK2-205ENST00000540251 1318 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
CDH9Q9ULB4 AC005332.1-201ENST00000577698 1310 ntBASIC19.66■□□□□ 0.74
CDH9Q9ULB4 ZNF281-202ENST00000367352 2933 ntAPPRIS ALT2 TSL 2 BASIC19.66■□□□□ 0.74
CDH9Q9ULB4 TAPT1-201ENST00000405303 4591 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
CDH9Q9ULB4 SEMA6C-210ENST00000621728 1918 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
CDH9Q9ULB4 AC112777.1-201ENST00000540175 1423 ntBASIC19.66■□□□□ 0.74
CDH9Q9ULB4 ADGRB1-201ENST00000323289 5527 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
CDH9Q9ULB4 GPR75-201ENST00000394705 2115 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
CDH9Q9ULB4 WEE1-202ENST00000450114 2799 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
CDH9Q9ULB4 AL360181.3-201ENST00000468317 1605 ntAPPRIS P1 TSL 5 BASIC19.65■□□□□ 0.74
CDH9Q9ULB4 COL13A1-205ENST00000398978 3093 ntAPPRIS P4 TSL 5 BASIC19.65■□□□□ 0.74
CDH9Q9ULB4 FARSA-202ENST00000423140 1720 ntTSL 2 BASIC19.65■□□□□ 0.74
CDH9Q9ULB4 AC114490.1-202ENST00000311990 1887 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
CDH9Q9ULB4 HOPX-201ENST00000317745 1129 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
CDH9Q9ULB4 CCDC151-201ENST00000356392 2107 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
CDH9Q9ULB4 LINC02317-201ENST00000555413 426 ntTSL 3 BASIC19.65■□□□□ 0.74
CDH9Q9ULB4 LUC7L-201ENST00000293872 1456 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
CDH9Q9ULB4 AC020661.1-201ENST00000503052 1584 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
CDH9Q9ULB4 PRSS33-201ENST00000293851 1694 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
CDH9Q9ULB4 MRPS7-204ENST00000579761 1717 ntTSL 2 BASIC19.65■□□□□ 0.74
CDH9Q9ULB4 POLE2-202ENST00000539565 1792 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
CDH9Q9ULB4 HEXDC-203ENST00000577944 1820 ntTSL 5 BASIC19.65■□□□□ 0.74
CDH9Q9ULB4 GNA12-201ENST00000275364 4378 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
CDH9Q9ULB4 TTC3-203ENST00000399010 2115 ntTSL 5 BASIC19.64■□□□□ 0.74
CDH9Q9ULB4 CD1E-210ENST00000368165 1003 ntAPPRIS ALT2 TSL 1 (best) BASIC19.64■□□□□ 0.73
CDH9Q9ULB4 AANAT-202ENST00000392492 1005 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
CDH9Q9ULB4 PVRIG2P-201ENST00000435460 978 ntBASIC19.64■□□□□ 0.73
CDH9Q9ULB4 CD1E-214ENST00000452291 745 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
CDH9Q9ULB4 SYNGR4-204ENST00000601610 859 ntTSL 3 BASIC19.64■□□□□ 0.73
CDH9Q9ULB4 ZACN-201ENST00000334586 1335 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
CDH9Q9ULB4 C6orf203-202ENST00000405204 1420 ntAPPRIS P1 TSL 2 BASIC19.64■□□□□ 0.73
CDH9Q9ULB4 AC093525.10-201ENST00000625130 1569 ntBASIC19.64■□□□□ 0.73
CDH9Q9ULB4 CENPT-215ENST00000564817 1638 ntAPPRIS ALT2 TSL 5 BASIC19.64■□□□□ 0.73
CDH9Q9ULB4 SLC2A14-214ENST00000542505 1650 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
CDH9Q9ULB4 P2RY6-201ENST00000349767 1700 ntAPPRIS P1 TSL 2 BASIC19.64■□□□□ 0.73
CDH9Q9ULB4 C19orf25-203ENST00000585675 1837 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
CDH9Q9ULB4 CCDC63-202ENST00000545036 1887 ntAPPRIS ALT2 TSL 2 BASIC19.64■□□□□ 0.73
CDH9Q9ULB4 DPF1-203ENST00000414789 1960 ntTSL 2 BASIC19.64■□□□□ 0.73
CDH9Q9ULB4 SLC35G2-202ENST00000446465 2060 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
CDH9Q9ULB4 TINAGL1-202ENST00000457433 2140 ntAPPRIS ALT2 TSL 2 BASIC19.64■□□□□ 0.73
CDH9Q9ULB4 TCTN1-223ENST00000550703 2149 ntTSL 2 BASIC19.64■□□□□ 0.73
CDH9Q9ULB4 NFATC4-220ENST00000555393 2235 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
CDH9Q9ULB4 GRK2-201ENST00000308595 3466 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
CDH9Q9ULB4 HMCES-201ENST00000383463 2515 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
CDH9Q9ULB4 HOXC13-201ENST00000243056 2423 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
CDH9Q9ULB4 PCID2-203ENST00000375457 2372 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
CDH9Q9ULB4 SNX17-201ENST00000233575 2044 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
CDH9Q9ULB4 ELMOD1-202ENST00000443271 1990 ntAPPRIS P1 TSL 2 BASIC19.63■□□□□ 0.73
CDH9Q9ULB4 CBSL-210ENST00000624934 1992 ntTSL 5 BASIC19.63■□□□□ 0.73
CDH9Q9ULB4 AL163051.1-201ENST00000569214 1512 ntBASIC19.63■□□□□ 0.73
CDH9Q9ULB4 AC008393.1-201ENST00000499601 1454 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
CDH9Q9ULB4 ZFC3H1-211ENST00000552037 1484 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
CDH9Q9ULB4 IER3-202ENST00000376377 1350 ntBASIC19.63■□□□□ 0.73
CDH9Q9ULB4 ISCA1-202ENST00000326094 1264 ntTSL 3 BASIC19.63■□□□□ 0.73
CDH9Q9ULB4 BET1L-202ENST00000332865 533 ntTSL 5 BASIC19.63■□□□□ 0.73
CDH9Q9ULB4 SMIM19-202ENST00000416469 691 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
CDH9Q9ULB4 PTK2-216ENST00000519881 863 ntTSL 3 BASIC19.63■□□□□ 0.73
CDH9Q9ULB4 USF2-205ENST00000594064 1179 ntTSL 2 BASIC19.63■□□□□ 0.73
CDH9Q9ULB4 AC116407.4-201ENST00000623319 1061 ntBASIC19.63■□□□□ 0.73
CDH9Q9ULB4 INSM2-201ENST00000307169 3013 ntAPPRIS P1 BASIC19.63■□□□□ 0.73
CDH9Q9ULB4 NAT16-201ENST00000300303 2935 ntAPPRIS P2 TSL 2 BASIC19.63■□□□□ 0.73
CDH9Q9ULB4 PDP1-208ENST00000520728 2554 ntAPPRIS P3 TSL 1 (best) BASIC19.63■□□□□ 0.73
CDH9Q9ULB4 NGLY1-202ENST00000280700 2473 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
CDH9Q9ULB4 GAS6-201ENST00000327773 2490 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
CDH9Q9ULB4 PITX2-201ENST00000306732 2320 ntAPPRIS P4 TSL 1 (best) BASIC19.63■□□□□ 0.73
CDH9Q9ULB4 COL4A3BP-201ENST00000261415 2262 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
CDH9Q9ULB4 PGAP3-206ENST00000579146 2220 ntTSL 2 BASIC19.63■□□□□ 0.73
CDH9Q9ULB4 DMWD-201ENST00000270223 3305 ntAPPRIS P2 TSL 1 (best) BASIC19.63■□□□□ 0.73
CDH9Q9ULB4 CACNA1I-204ENST00000407673 5952 ntAPPRIS ALT2 TSL 1 (best) BASIC19.63■□□□□ 0.73
CDH9Q9ULB4 CARD9-202ENST00000371734 1814 ntTSL 5 BASIC19.62■□□□□ 0.73
CDH9Q9ULB4 CCNA1-202ENST00000440264 1758 ntAPPRIS P1 TSL 2 BASIC19.62■□□□□ 0.73
CDH9Q9ULB4 ERCC2-205ENST00000485403 1538 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
CDH9Q9ULB4 MRGPRF-AS1-201ENST00000538407 1490 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
CDH9Q9ULB4 PRSS36-202ENST00000418068 2446 ntTSL 2 BASIC19.62■□□□□ 0.73
CDH9Q9ULB4 METTL5-207ENST00000410097 1370 ntTSL 2 BASIC19.62■□□□□ 0.73
CDH9Q9ULB4 LPCAT3-201ENST00000261407 2268 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
CDH9Q9ULB4 AC008073.3-201ENST00000610442 2281 ntAPPRIS P1 TSL 2 BASIC19.62■□□□□ 0.73
CDH9Q9ULB4 UBE2C-204ENST00000356455 850 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
CDH9Q9ULB4 C16orf91-201ENST00000442039 978 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
CDH9Q9ULB4 MYD88-206ENST00000443433 914 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
CDH9Q9ULB4 AC027682.5-201ENST00000567122 530 ntTSL 3 BASIC19.62■□□□□ 0.73
Retrieved 100 of 98,524 protein–RNA pairs in 20.3 ms