Protein–RNA interactions for Protein: Q9P244

LRFN1, Leucine-rich repeat and fibronectin type III domain-containing protein 1, humanhuman

Predictions only

Length 771 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRFN1Q9P244 ZFAND2A-203ENST00000401903 968 ntTSL 3 BASIC17.07■□□□□ 0.32
LRFN1Q9P244 UBE2C-206ENST00000405520 641 ntTSL 2 BASIC17.07■□□□□ 0.32
LRFN1Q9P244 AL603832.1-201ENST00000421943 449 ntTSL 5 BASIC17.07■□□□□ 0.32
LRFN1Q9P244 ZNF706-206ENST00000519744 785 ntTSL 3 BASIC17.07■□□□□ 0.32
LRFN1Q9P244 AC004080.2-201ENST00000523331 556 ntTSL 4 BASIC17.07■□□□□ 0.32
LRFN1Q9P244 MFGE8-203ENST00000542878 1172 ntTSL 2 BASIC17.07■□□□□ 0.32
LRFN1Q9P244 C14orf144-201ENST00000553757 537 ntTSL 4 BASIC17.07■□□□□ 0.32
LRFN1Q9P244 LINC02317-201ENST00000555413 426 ntTSL 3 BASIC17.07■□□□□ 0.32
LRFN1Q9P244 LINC00092-202ENST00000580908 580 ntTSL 2 BASIC17.07■□□□□ 0.32
LRFN1Q9P244 NDUFV2-AS1-203ENST00000608008 779 ntBASIC17.07■□□□□ 0.32
LRFN1Q9P244 UBE2C-208ENST00000617055 705 ntTSL 3 BASIC17.07■□□□□ 0.32
LRFN1Q9P244 RALGAPA1-219ENST00000637992 8512 ntTSL 5 BASIC17.07■□□□□ 0.32
LRFN1Q9P244 TMEM191A-208ENST00000450925 1961 ntTSL 2 BASIC17.07■□□□□ 0.32
LRFN1Q9P244 ILDR2-203ENST00000469934 1950 ntAPPRIS ALT2 TSL 5 BASIC17.07■□□□□ 0.32
LRFN1Q9P244 RASSF1-201ENST00000327761 1757 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
LRFN1Q9P244 CCDC91-207ENST00000539107 2440 ntTSL 5 BASIC17.07■□□□□ 0.32
LRFN1Q9P244 CRTC1-203ENST00000594658 2384 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
LRFN1Q9P244 SETMAR-206ENST00000430981 1671 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
LRFN1Q9P244 ECE1-205ENST00000436918 2328 ntTSL 2 BASIC17.07■□□□□ 0.32
LRFN1Q9P244 DGKZ-203ENST00000421244 2862 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
LRFN1Q9P244 GFI1-201ENST00000294702 2784 ntAPPRIS P1 TSL 2 BASIC17.06■□□□□ 0.32
LRFN1Q9P244 PCSK7-201ENST00000320934 4649 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
LRFN1Q9P244 PTGER3-202ENST00000351052 1404 ntAPPRIS ALT2 TSL 5 BASIC17.06■□□□□ 0.32
LRFN1Q9P244 LINC02028-204ENST00000449350 1419 ntTSL 3 BASIC17.06■□□□□ 0.32
LRFN1Q9P244 NOP14-AS1-202ENST00000505731 1999 ntTSL 2 BASIC17.06■□□□□ 0.32
LRFN1Q9P244 AC087482.1-204ENST00000636067 2431 ntTSL 5 BASIC17.06■□□□□ 0.32
LRFN1Q9P244 SRRM2-AS1-203ENST00000571305 1344 ntTSL 2 BASIC17.06■□□□□ 0.32
LRFN1Q9P244 MOGS-201ENST00000233616 2895 ntAPPRIS P3 TSL 1 (best) BASIC17.06■□□□□ 0.32
LRFN1Q9P244 KRT18P56-201ENST00000507275 550 ntBASIC17.06■□□□□ 0.32
LRFN1Q9P244 RPL26L1-205ENST00000519974 695 ntAPPRIS P1 TSL 3 BASIC17.06■□□□□ 0.32
LRFN1Q9P244 CLDN7-204ENST00000571881 735 ntTSL 3 BASIC17.06■□□□□ 0.32
LRFN1Q9P244 AC015961.2-201ENST00000589281 701 ntTSL 3 BASIC17.06■□□□□ 0.32
LRFN1Q9P244 AC010240.3-201ENST00000607688 395 ntBASIC17.06■□□□□ 0.32
LRFN1Q9P244 Metazoa_SRP.33-201ENST00000613468 285 ntBASIC17.06■□□□□ 0.32
LRFN1Q9P244 AC068587.9-201ENST00000641814 219 ntBASIC17.06■□□□□ 0.32
LRFN1Q9P244 FFAR3-201ENST00000327809 1796 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
LRFN1Q9P244 SMPD1-203ENST00000527275 2188 ntAPPRIS P3 TSL 2 BASIC17.06■□□□□ 0.32
LRFN1Q9P244 MATN4-202ENST00000360607 2127 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
LRFN1Q9P244 P2RX5-202ENST00000345901 2031 ntTSL 5 BASIC17.06■□□□□ 0.32
LRFN1Q9P244 PLCG1-202ENST00000373271 7395 ntAPPRIS ALT1 TSL 1 (best) BASIC17.06■□□□□ 0.32
LRFN1Q9P244 SNTB2-201ENST00000336278 9789 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
LRFN1Q9P244 DYNC1LI2-201ENST00000258198 4515 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
LRFN1Q9P244 NAPRT-203ENST00000435154 1877 ntTSL 2 BASIC17.05■□□□□ 0.32
LRFN1Q9P244 EXOSC3-201ENST00000327304 1806 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
LRFN1Q9P244 CHTOP-207ENST00000614256 1840 ntTSL 3 BASIC17.05■□□□□ 0.32
LRFN1Q9P244 STX5-202ENST00000377897 1785 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
LRFN1Q9P244 AP5S1-202ENST00000379567 1791 ntAPPRIS P1 TSL 2 BASIC17.05■□□□□ 0.32
LRFN1Q9P244 MIR4300HG-201ENST00000500502 1397 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
LRFN1Q9P244 AC006333.2-201ENST00000607957 2099 ntBASIC17.05■□□□□ 0.32
LRFN1Q9P244 PAIP1-201ENST00000306846 2782 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
LRFN1Q9P244 ALG9-214ENST00000614444 2028 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
LRFN1Q9P244 HOPX-201ENST00000317745 1129 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
LRFN1Q9P244 IMMP2L-207ENST00000452895 833 ntAPPRIS P1 TSL 5 BASIC17.05■□□□□ 0.32
LRFN1Q9P244 HOXB-AS3-203ENST00000465846 434 ntTSL 3 BASIC17.05■□□□□ 0.32
LRFN1Q9P244 AK2-204ENST00000467905 880 ntAPPRIS ALT1 TSL 2 BASIC17.05■□□□□ 0.32
LRFN1Q9P244 AC051649.1-201ENST00000509204 330 ntTSL 3 BASIC17.05■□□□□ 0.32
LRFN1Q9P244 AL136038.4-201ENST00000603606 1261 ntBASIC17.05■□□□□ 0.32
LRFN1Q9P244 LCE1C-202ENST00000607093 644 ntAPPRIS P2 BASIC17.05■□□□□ 0.32
LRFN1Q9P244 CADM1-222ENST00000616271 1246 ntTSL 5 BASIC17.05■□□□□ 0.32
LRFN1Q9P244 AC079602.3-201ENST00000623931 403 ntBASIC17.05■□□□□ 0.32
LRFN1Q9P244 CHRNA4-201ENST00000370263 5577 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
LRFN1Q9P244 C18orf25-204ENST00000615553 2329 ntTSL 5 BASIC17.05■□□□□ 0.32
LRFN1Q9P244 SRP9-203ENST00000366839 1596 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
LRFN1Q9P244 STIM2-211ENST00000639195 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC17.05■□□□□ 0.32
LRFN1Q9P244 AHCYL1-203ENST00000393614 4313 ntTSL 2 BASIC17.05■□□□□ 0.32
LRFN1Q9P244 LAD1-202ENST00000391967 2906 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
LRFN1Q9P244 SASH1-201ENST00000367467 7711 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
LRFN1Q9P244 AC008878.3-201ENST00000617428 4964 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
LRFN1Q9P244 NHLRC1-201ENST00000340650 2248 ntAPPRIS P1 BASIC17.05■□□□□ 0.32
LRFN1Q9P244 DMD-208ENST00000378680 1858 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
LRFN1Q9P244 STEAP1B-201ENST00000404369 1515 ntAPPRIS ALT2 TSL 1 (best) BASIC17.05■□□□□ 0.32
LRFN1Q9P244 CLDND1-203ENST00000394181 2170 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
LRFN1Q9P244 FHL1-219ENST00000618438 2178 ntTSL 3 BASIC17.05■□□□□ 0.32
LRFN1Q9P244 PMEPA1-202ENST00000341744 4845 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
LRFN1Q9P244 MAPT-209ENST00000446361 5345 ntAPPRIS ALT2 TSL 1 (best) BASIC17.05■□□□□ 0.32
LRFN1Q9P244 LDHD-201ENST00000300051 2067 ntAPPRIS P3 TSL 1 (best) BASIC17.05■□□□□ 0.32
LRFN1Q9P244 CLIP2-201ENST00000223398 5563 ntAPPRIS P1 TSL 5 BASIC17.05■□□□□ 0.32
LRFN1Q9P244 C6orf203-202ENST00000405204 1420 ntAPPRIS P1 TSL 2 BASIC17.04■□□□□ 0.32
LRFN1Q9P244 WNT6-201ENST00000233948 1703 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
LRFN1Q9P244 ETV7-202ENST00000340181 1719 ntAPPRIS P3 TSL 1 (best) BASIC17.04■□□□□ 0.32
LRFN1Q9P244 FAM50A-202ENST00000393600 1352 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
LRFN1Q9P244 AC012615.6-201ENST00000593201 1697 ntTSL 2 BASIC17.04■□□□□ 0.32
LRFN1Q9P244 IQSEC1-201ENST00000273221 5279 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
LRFN1Q9P244 AP003356.1-202ENST00000517910 2770 ntTSL 2 BASIC17.04■□□□□ 0.32
LRFN1Q9P244 SLC35E1-208ENST00000595753 5099 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
LRFN1Q9P244 EDNRA-206ENST00000511804 1569 ntTSL 2 BASIC17.04■□□□□ 0.32
LRFN1Q9P244 ZDHHC2-201ENST00000262096 6377 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
LRFN1Q9P244 CRELD2-204ENST00000407217 1230 ntAPPRIS ALT2 TSL 1 (best) BASIC17.04■□□□□ 0.32
LRFN1Q9P244 TMEM243-203ENST00000433078 1273 ntAPPRIS P1 TSL 2 BASIC17.04■□□□□ 0.32
LRFN1Q9P244 MYD88-206ENST00000443433 914 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
LRFN1Q9P244 AC116353.4-201ENST00000507279 576 ntTSL 4 BASIC17.04■□□□□ 0.32
LRFN1Q9P244 LY6E-209ENST00000521003 740 ntAPPRIS P2 TSL 2 BASIC17.04■□□□□ 0.32
LRFN1Q9P244 CSRP1-214ENST00000531916 890 ntTSL 5 BASIC17.04■□□□□ 0.32
LRFN1Q9P244 NTF4-201ENST00000593537 932 ntAPPRIS P1 BASIC17.04■□□□□ 0.32
LRFN1Q9P244 SPEG-225ENST00000617028 815 ntTSL 5 BASIC17.04■□□□□ 0.32
LRFN1Q9P244 C15orf56-202ENST00000623360 2129 ntTSL 2 BASIC17.04■□□□□ 0.32
LRFN1Q9P244 EBLN3P-205ENST00000629870 958 ntTSL 3 BASIC17.04■□□□□ 0.32
LRFN1Q9P244 AL391807.1-203ENST00000604392 2365 ntBASIC17.04■□□□□ 0.32
LRFN1Q9P244 MAP2K5-202ENST00000340972 1491 ntTSL 2 BASIC17.04■□□□□ 0.32
LRFN1Q9P244 UBE3C-201ENST00000348165 5229 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Retrieved 100 of 98,524 protein–RNA pairs in 25.7 ms