Protein–RNA interactions for Protein: Q9NZI7

UBP1, Upstream-binding protein 1, humanhuman

Predictions only

Length 540 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBP1Q9NZI7 AP003041.3-201ENST00000527151 707 ntBASIC18.97■□□□□ 0.63
UBP1Q9NZI7 AL023803.3-201ENST00000615559 522 ntBASIC18.97■□□□□ 0.63
UBP1Q9NZI7 STRADB-202ENST00000392249 2190 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
UBP1Q9NZI7 CASP16P-202ENST00000575497 2161 ntTSL 2 BASIC18.97■□□□□ 0.63
UBP1Q9NZI7 SEMA6C-210ENST00000621728 1918 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
UBP1Q9NZI7 CDK4-202ENST00000312990 1650 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
UBP1Q9NZI7 AL109659.2-201ENST00000606809 1674 ntBASIC18.97■□□□□ 0.63
UBP1Q9NZI7 TRIM61-201ENST00000329314 1582 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
UBP1Q9NZI7 KCNQ2-218ENST00000629676 2399 ntTSL 5 BASIC18.97■□□□□ 0.63
UBP1Q9NZI7 PSMG4-209ENST00000473000 4603 ntTSL 2 BASIC18.97■□□□□ 0.63
UBP1Q9NZI7 PLA2G15-202ENST00000413021 1346 ntTSL 2 BASIC18.97■□□□□ 0.63
UBP1Q9NZI7 TEX13A-202ENST00000609007 1349 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
UBP1Q9NZI7 AC099343.3-201ENST00000605834 2503 ntBASIC18.97■□□□□ 0.63
UBP1Q9NZI7 DISP3-202ENST00000304391 1495 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
UBP1Q9NZI7 ZNF692-204ENST00000451251 2065 ntAPPRIS ALT2 TSL 2 BASIC18.96■□□□□ 0.63
UBP1Q9NZI7 TFAP4-201ENST00000204517 2215 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
UBP1Q9NZI7 ZSWIM4-201ENST00000254323 4339 ntAPPRIS P1 TSL 2 BASIC18.96■□□□□ 0.63
UBP1Q9NZI7 TMEM240-201ENST00000378733 718 ntAPPRIS P1 TSL 2 BASIC18.96■□□□□ 0.63
UBP1Q9NZI7 C7orf50-203ENST00000397100 1264 ntAPPRIS P2 TSL 3 BASIC18.96■□□□□ 0.63
UBP1Q9NZI7 AL390719.1-201ENST00000427998 977 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
UBP1Q9NZI7 MCCD1P1-208ENST00000445732 328 ntBASIC18.96■□□□□ 0.63
UBP1Q9NZI7 ARHGDIA-207ENST00000580685 1201 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
UBP1Q9NZI7 AC090164.3-201ENST00000610780 2143 ntBASIC18.96■□□□□ 0.63
UBP1Q9NZI7 ATG4B-226ENST00000625810 370 ntTSL 4 BASIC18.96■□□□□ 0.63
UBP1Q9NZI7 RPS27A-211ENST00000639844 606 ntTSL 5 BASIC18.96■□□□□ 0.63
UBP1Q9NZI7 SERPINH1-215ENST00000533603 2299 ntAPPRIS P1 TSL 2 BASIC18.96■□□□□ 0.63
UBP1Q9NZI7 CCNJL-203ENST00000393977 3320 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
UBP1Q9NZI7 SIL1-202ENST00000394817 1923 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
UBP1Q9NZI7 SENP6-202ENST00000370010 4644 ntAPPRIS P3 TSL 1 (best) BASIC18.96■□□□□ 0.63
UBP1Q9NZI7 MLX-201ENST00000246912 2586 ntAPPRIS P3 TSL 1 (best) BASIC18.95■□□□□ 0.62
UBP1Q9NZI7 FOXI1-201ENST00000306268 1990 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
UBP1Q9NZI7 BSG-201ENST00000333511 1974 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
UBP1Q9NZI7 LYPD3-201ENST00000244333 1694 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
UBP1Q9NZI7 C12orf42-205ENST00000548048 1532 ntAPPRIS ALT2 TSL 5 BASIC18.95■□□□□ 0.62
UBP1Q9NZI7 SPOPL-201ENST00000280098 6025 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
UBP1Q9NZI7 RELL2-202ENST00000444782 2154 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
UBP1Q9NZI7 HYOU1-212ENST00000532519 2162 ntTSL 5 BASIC18.95■□□□□ 0.62
UBP1Q9NZI7 BMP8B-201ENST00000372827 4822 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
UBP1Q9NZI7 CTSA-201ENST00000191018 1898 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
UBP1Q9NZI7 ATP5L-201ENST00000300688 1577 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
UBP1Q9NZI7 PHKG2-202ENST00000424889 1566 ntTSL 2 BASIC18.95■□□□□ 0.62
UBP1Q9NZI7 MMP23A-201ENST00000234610 1017 ntBASIC18.95■□□□□ 0.62
UBP1Q9NZI7 NPM3-201ENST00000370110 877 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
UBP1Q9NZI7 SHBG-203ENST00000416273 1042 ntAPPRIS ALT2 TSL 3 BASIC18.95■□□□□ 0.62
UBP1Q9NZI7 SLC25A1P2-201ENST00000430693 912 ntBASIC18.95■□□□□ 0.62
UBP1Q9NZI7 ANK1-211ENST00000522231 1060 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
UBP1Q9NZI7 ANK1-212ENST00000522543 1160 ntTSL 2 BASIC18.95■□□□□ 0.62
UBP1Q9NZI7 NCAM1-AS1-201ENST00000526229 1081 ntTSL 2 BASIC18.95■□□□□ 0.62
UBP1Q9NZI7 MVB12A-204ENST00000528515 686 ntTSL 5 BASIC18.95■□□□□ 0.62
UBP1Q9NZI7 SHBG-215ENST00000575903 1196 ntTSL 3 BASIC18.95■□□□□ 0.62
UBP1Q9NZI7 TTLL12-201ENST00000216129 3385 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
UBP1Q9NZI7 CNIH3-201ENST00000272133 2558 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
UBP1Q9NZI7 MIDN-206ENST00000591446 3243 ntAPPRIS P2 TSL 1 (best) BASIC18.95■□□□□ 0.62
UBP1Q9NZI7 TRIM63-201ENST00000374272 1770 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
UBP1Q9NZI7 RAPH1-201ENST00000308091 2768 ntAPPRIS ALT2 TSL 1 (best) BASIC18.95■□□□□ 0.62
UBP1Q9NZI7 NARFL-201ENST00000251588 2112 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
UBP1Q9NZI7 CADPS2-201ENST00000313070 6065 ntTSL 5 BASIC18.95■□□□□ 0.62
UBP1Q9NZI7 DHRS12-201ENST00000218981 1970 ntTSL 2 BASIC18.95■□□□□ 0.62
UBP1Q9NZI7 MPZ-206ENST00000533357 1955 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
UBP1Q9NZI7 TAF6-211ENST00000453269 2464 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
UBP1Q9NZI7 ZNF839-202ENST00000442396 2987 ntAPPRIS P3 TSL 5 BASIC18.95■□□□□ 0.62
UBP1Q9NZI7 EXOSC3-201ENST00000327304 1806 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
UBP1Q9NZI7 AGPAT3-201ENST00000291572 5546 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
UBP1Q9NZI7 TSSC4-201ENST00000333256 1686 ntAPPRIS P3 TSL 1 (best) BASIC18.95■□□□□ 0.62
UBP1Q9NZI7 KDM4B-202ENST00000381759 3058 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
UBP1Q9NZI7 ARID1A-201ENST00000324856 8577 ntAPPRIS P3 TSL 1 (best) BASIC18.94■□□□□ 0.62
UBP1Q9NZI7 AC007613.1-201ENST00000572811 2597 ntBASIC18.94■□□□□ 0.62
UBP1Q9NZI7 TFCP2-205ENST00000549867 1727 ntTSL 5 BASIC18.94■□□□□ 0.62
UBP1Q9NZI7 ZBTB8A-201ENST00000316459 1943 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
UBP1Q9NZI7 CHRAC1-201ENST00000220913 2488 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
UBP1Q9NZI7 XYLT2-203ENST00000507602 2107 ntTSL 2 BASIC18.94■□□□□ 0.62
UBP1Q9NZI7 TNPO2-203ENST00000450764 4993 ntAPPRIS ALT1 TSL 1 (best) BASIC18.94■□□□□ 0.62
UBP1Q9NZI7 SPATA6L-207ENST00000475086 1444 ntAPPRIS P1 TSL 2 BASIC18.94■□□□□ 0.62
UBP1Q9NZI7 CCNC-207ENST00000518714 1426 ntTSL 5 BASIC18.94■□□□□ 0.62
UBP1Q9NZI7 CHRNA4-207ENST00000615287 5643 ntTSL 5 BASIC18.94■□□□□ 0.62
UBP1Q9NZI7 PLPP7-201ENST00000372261 972 ntTSL 2 BASIC18.94■□□□□ 0.62
UBP1Q9NZI7 IKBKB-210ENST00000518983 447 ntTSL 2 BASIC18.94■□□□□ 0.62
UBP1Q9NZI7 C2orf69P3-201ENST00000565542 1120 ntBASIC18.94■□□□□ 0.62
UBP1Q9NZI7 AL353719.1-201ENST00000566847 864 ntBASIC18.94■□□□□ 0.62
UBP1Q9NZI7 AC010947.1-201ENST00000623454 693 ntBASIC18.94■□□□□ 0.62
UBP1Q9NZI7 GLDC-219ENST00000640208 420 ntTSL 2 BASIC18.94■□□□□ 0.62
UBP1Q9NZI7 CLN3-206ENST00000360019 1840 ntTSL 2 BASIC18.94■□□□□ 0.62
UBP1Q9NZI7 CHRNB1-201ENST00000306071 2557 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
UBP1Q9NZI7 RCAN3-205ENST00000436717 2574 ntTSL 3 BASIC18.94■□□□□ 0.62
UBP1Q9NZI7 MATN4-203ENST00000372754 2200 ntAPPRIS ALT2 TSL 5 BASIC18.94■□□□□ 0.62
UBP1Q9NZI7 GTF2IP4-202ENST00000544802 3609 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
UBP1Q9NZI7 PLEKHG5-212ENST00000537245 4794 ntAPPRIS ALT2 TSL 2 BASIC18.94■□□□□ 0.62
UBP1Q9NZI7 GBGT1-208ENST00000540636 1934 ntTSL 2 BASIC18.94■□□□□ 0.62
UBP1Q9NZI7 NOP14-204ENST00000502735 2723 ntAPPRIS ALT2 TSL 5 BASIC18.94■□□□□ 0.62
UBP1Q9NZI7 PRR5-201ENST00000006251 1767 ntTSL 2 BASIC18.93■□□□□ 0.62
UBP1Q9NZI7 ANKS1A-201ENST00000360359 6347 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
UBP1Q9NZI7 DUS1L-202ENST00000354321 2151 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
UBP1Q9NZI7 AGO4-201ENST00000373210 7116 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
UBP1Q9NZI7 PLEKHG5-206ENST00000377748 5221 ntAPPRIS ALT2 TSL 2 BASIC18.93■□□□□ 0.62
UBP1Q9NZI7 ADK-206ENST00000541550 2222 ntTSL 2 BASIC18.93■□□□□ 0.62
UBP1Q9NZI7 DHRS4-201ENST00000313250 1443 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
UBP1Q9NZI7 AC092338.2-201ENST00000568827 1415 ntBASIC18.93■□□□□ 0.62
UBP1Q9NZI7 LARGE2-206ENST00000529052 2459 ntAPPRIS ALT2 TSL 2 BASIC18.93■□□□□ 0.62
UBP1Q9NZI7 ZNF274-203ENST00000424679 2539 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
UBP1Q9NZI7 PHOSPHO2-201ENST00000359744 1125 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Retrieved 100 of 98,524 protein–RNA pairs in 36.7 ms