Protein–RNA interactions for Protein: Q9NYA1

SPHK1, Sphingosine kinase 1, humanhuman

Predictions only

Length 384 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPHK1Q9NYA1 RHOT1-202ENST00000354266 2919 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
SPHK1Q9NYA1 IKBKG-214ENST00000618670 2069 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
SPHK1Q9NYA1 BRPF3-202ENST00000357641 6052 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
SPHK1Q9NYA1 RREB1-203ENST00000379933 5826 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
SPHK1Q9NYA1 KRT8P7-201ENST00000533003 1432 ntBASIC17.92■□□□□ 0.46
SPHK1Q9NYA1 TWIST2-202ENST00000612363 1404 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
SPHK1Q9NYA1 CPNE7-201ENST00000268720 2657 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
SPHK1Q9NYA1 SH2B3-201ENST00000341259 5406 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
SPHK1Q9NYA1 TMEM8B-204ENST00000439587 2150 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
SPHK1Q9NYA1 AC093620.1-201ENST00000342963 583 ntTSL 3 BASIC17.92■□□□□ 0.46
SPHK1Q9NYA1 SAPCD2P2-201ENST00000431719 1174 ntBASIC17.92■□□□□ 0.46
SPHK1Q9NYA1 AC004080.5-201ENST00000498652 368 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
SPHK1Q9NYA1 CCNG1-211ENST00000512163 919 ntTSL 2 BASIC17.92■□□□□ 0.46
SPHK1Q9NYA1 AC104390.1-201ENST00000555663 520 ntBASIC17.92■□□□□ 0.46
SPHK1Q9NYA1 AC021739.3-201ENST00000557908 855 ntTSL 2 BASIC17.92■□□□□ 0.46
SPHK1Q9NYA1 NAT14-202ENST00000587400 416 ntTSL 5 BASIC17.92■□□□□ 0.46
SPHK1Q9NYA1 ELAVL1-202ENST00000593807 856 ntTSL 3 BASIC17.92■□□□□ 0.46
SPHK1Q9NYA1 C16orf74-203ENST00000602675 744 ntAPPRIS ALT2 TSL 1 (best) BASIC17.92■□□□□ 0.46
SPHK1Q9NYA1 C16orf74-206ENST00000602766 832 ntAPPRIS ALT2 TSL 3 BASIC17.92■□□□□ 0.46
SPHK1Q9NYA1 SMIM8-209ENST00000608868 815 ntAPPRIS P1 TSL 5 BASIC17.92■□□□□ 0.46
SPHK1Q9NYA1 COLCA2-205ENST00000614153 1264 ntTSL 3 BASIC17.92■□□□□ 0.46
SPHK1Q9NYA1 HEXDC-203ENST00000577944 1820 ntTSL 5 BASIC17.92■□□□□ 0.46
SPHK1Q9NYA1 ADPGK-201ENST00000311669 2557 ntAPPRIS P1 TSL 2 BASIC17.92■□□□□ 0.46
SPHK1Q9NYA1 ZBED3-AS1-208ENST00000512001 1668 ntTSL 3 BASIC17.92■□□□□ 0.46
SPHK1Q9NYA1 OSM-201ENST00000215781 1854 ntAPPRIS P3 TSL 1 (best) BASIC17.92■□□□□ 0.46
SPHK1Q9NYA1 SLC26A11-212ENST00000572725 1862 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
SPHK1Q9NYA1 HOXA11-201ENST00000006015 2295 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
SPHK1Q9NYA1 PTH2R-204ENST00000617735 2472 ntTSL 2 BASIC17.92■□□□□ 0.46
SPHK1Q9NYA1 SSX2IP-210ENST00000605755 1933 ntTSL 2 BASIC17.92■□□□□ 0.46
SPHK1Q9NYA1 GFER-201ENST00000248114 2345 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
SPHK1Q9NYA1 CDHR5-201ENST00000349570 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC17.92■□□□□ 0.46
SPHK1Q9NYA1 TUBA3C-201ENST00000400113 1551 ntAPPRIS P1 TSL 5 BASIC17.91■□□□□ 0.46
SPHK1Q9NYA1 AL512380.2-201ENST00000637901 1780 ntTSL 5 BASIC17.91■□□□□ 0.46
SPHK1Q9NYA1 LRRC36-201ENST00000329956 2395 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
SPHK1Q9NYA1 SMARCD1-201ENST00000381513 3237 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
SPHK1Q9NYA1 SLC27A3-204ENST00000368661 2410 ntAPPRIS P2 TSL 1 (best) BASIC17.91■□□□□ 0.46
SPHK1Q9NYA1 PTBP1-220ENST00000627714 2201 ntTSL 5 BASIC17.91■□□□□ 0.46
SPHK1Q9NYA1 KRT8P50-201ENST00000562022 1438 ntBASIC17.91■□□□□ 0.46
SPHK1Q9NYA1 CCDC88B-202ENST00000356786 4915 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
SPHK1Q9NYA1 NECTIN1-201ENST00000264025 5840 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
SPHK1Q9NYA1 GRB7-202ENST00000394204 1667 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
SPHK1Q9NYA1 SENP6-201ENST00000327284 2700 ntTSL 2 BASIC17.91■□□□□ 0.46
SPHK1Q9NYA1 SPAG4-201ENST00000374273 1453 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
SPHK1Q9NYA1 PYDC1-201ENST00000302964 813 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
SPHK1Q9NYA1 ARMC10P1-201ENST00000313754 855 ntBASIC17.91■□□□□ 0.46
SPHK1Q9NYA1 LCE3D-201ENST00000368787 613 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
SPHK1Q9NYA1 SNCB-202ENST00000393693 1234 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
SPHK1Q9NYA1 STARP1-201ENST00000397973 869 ntBASIC17.91■□□□□ 0.46
SPHK1Q9NYA1 RASA4DP-201ENST00000460726 1199 ntBASIC17.91■□□□□ 0.46
SPHK1Q9NYA1 ZNF706-206ENST00000519744 785 ntTSL 3 BASIC17.91■□□□□ 0.46
SPHK1Q9NYA1 C14orf144-201ENST00000553757 537 ntTSL 4 BASIC17.91■□□□□ 0.46
SPHK1Q9NYA1 LINC01238-205ENST00000567549 1107 ntBASIC17.91■□□□□ 0.46
SPHK1Q9NYA1 DUX4-205ENST00000570263 768 ntAPPRIS ALT2 TSL 1 (best) BASIC17.91■□□□□ 0.46
SPHK1Q9NYA1 AC010240.3-201ENST00000607688 395 ntBASIC17.91■□□□□ 0.46
SPHK1Q9NYA1 ZNF534-205ENST00000617900 1085 ntTSL 2 BASIC17.91■□□□□ 0.46
SPHK1Q9NYA1 DFFB-212ENST00000625756 649 ntTSL 5 BASIC17.91■□□□□ 0.46
SPHK1Q9NYA1 AL157888.1-201ENST00000631930 593 ntBASIC17.91■□□□□ 0.46
SPHK1Q9NYA1 MYC-208ENST00000641036 567 ntBASIC17.91■□□□□ 0.46
SPHK1Q9NYA1 SOX11-201ENST00000322002 8719 ntAPPRIS P1 BASIC17.91■□□□□ 0.46
SPHK1Q9NYA1 ETV7-202ENST00000340181 1719 ntAPPRIS P3 TSL 1 (best) BASIC17.91■□□□□ 0.46
SPHK1Q9NYA1 CYP51A1P1-201ENST00000492267 1507 ntBASIC17.91■□□□□ 0.46
SPHK1Q9NYA1 EFEMP2-210ENST00000528176 1504 ntTSL 5 BASIC17.91■□□□□ 0.46
SPHK1Q9NYA1 TRIM61-201ENST00000329314 1582 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
SPHK1Q9NYA1 HLA-G-205ENST00000428701 1578 ntAPPRIS P2 BASIC17.91■□□□□ 0.46
SPHK1Q9NYA1 SORBS3-221ENST00000523965 2028 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
SPHK1Q9NYA1 AC093525.10-201ENST00000625130 1569 ntBASIC17.91■□□□□ 0.46
SPHK1Q9NYA1 NOL3-211ENST00000568146 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC17.91■□□□□ 0.46
SPHK1Q9NYA1 LURAP1-201ENST00000371980 1854 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
SPHK1Q9NYA1 ARMC6-202ENST00000392335 2383 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
SPHK1Q9NYA1 SMARCC2-201ENST00000267064 4076 ntAPPRIS P4 TSL 1 (best) BASIC17.9■□□□□ 0.46
SPHK1Q9NYA1 PRODH-215ENST00000610940 2405 ntAPPRIS P3 TSL 1 (best) BASIC17.9■□□□□ 0.46
SPHK1Q9NYA1 BTG3-201ENST00000339775 1485 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
SPHK1Q9NYA1 MED25-212ENST00000618715 1467 ntTSL 5 BASIC17.9■□□□□ 0.46
SPHK1Q9NYA1 AGO3-202ENST00000324350 1726 ntTSL 2 BASIC17.9■□□□□ 0.46
SPHK1Q9NYA1 ACBD5-201ENST00000375888 1747 ntAPPRIS ALT2 TSL 5 BASIC17.9■□□□□ 0.46
SPHK1Q9NYA1 ANO7L1-203ENST00000602586 1720 ntBASIC17.9■□□□□ 0.46
SPHK1Q9NYA1 GRM5-201ENST00000305432 4475 ntAPPRIS P3 TSL 1 (best) BASIC17.9■□□□□ 0.46
SPHK1Q9NYA1 KRT9-201ENST00000246662 2290 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
SPHK1Q9NYA1 BX323043.1-201ENST00000641006 1765 ntBASIC17.9■□□□□ 0.46
SPHK1Q9NYA1 COPE-203ENST00000351079 907 ntTSL 2 BASIC17.9■□□□□ 0.46
SPHK1Q9NYA1 RPL26L1-205ENST00000519974 695 ntAPPRIS P1 TSL 3 BASIC17.9■□□□□ 0.46
SPHK1Q9NYA1 AC004076.1-201ENST00000596831 664 ntAPPRIS P1 TSL 2 BASIC17.9■□□□□ 0.46
SPHK1Q9NYA1 AC243829.1-201ENST00000615128 1059 ntTSL 2 BASIC17.9■□□□□ 0.46
SPHK1Q9NYA1 CASKIN1-201ENST00000343516 5759 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
SPHK1Q9NYA1 ZNF623-203ENST00000526926 2612 ntAPPRIS ALT2 TSL 2 BASIC17.9■□□□□ 0.46
SPHK1Q9NYA1 LY6E-203ENST00000517503 1335 ntAPPRIS ALT2 TSL 3 BASIC17.9■□□□□ 0.46
SPHK1Q9NYA1 CADPS-201ENST00000283269 4591 ntAPPRIS P4 TSL 1 (best) BASIC17.9■□□□□ 0.46
SPHK1Q9NYA1 FA2H-201ENST00000219368 2424 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
SPHK1Q9NYA1 CAB39-202ENST00000409788 1626 ntAPPRIS P1 TSL 2 BASIC17.9■□□□□ 0.46
SPHK1Q9NYA1 HOXC10-201ENST00000303460 1936 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
SPHK1Q9NYA1 FAM50A-202ENST00000393600 1352 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
SPHK1Q9NYA1 SLC2A14-214ENST00000542505 1650 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
SPHK1Q9NYA1 AC099343.3-201ENST00000605834 2503 ntBASIC17.9■□□□□ 0.46
SPHK1Q9NYA1 IL10RB-201ENST00000290200 1963 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
SPHK1Q9NYA1 FPGS-203ENST00000373247 2279 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.46
SPHK1Q9NYA1 CMTM7-201ENST00000334983 2038 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.46
SPHK1Q9NYA1 TMEM53-202ENST00000372237 2310 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.46
SPHK1Q9NYA1 OBSL1-204ENST00000404537 5841 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.46
SPHK1Q9NYA1 AL031598.1-201ENST00000561511 1773 ntBASIC17.89■□□□□ 0.45
SPHK1Q9NYA1 SAAL1-201ENST00000300013 1518 ntAPPRIS ALT1 TSL 2 BASIC17.89■□□□□ 0.45
Retrieved 100 of 98,524 protein–RNA pairs in 30.7 ms