Protein–RNA interactions for Protein: Q9NXB0

MKS1, Meckel syndrome type 1 protein, humanhuman

Predictions only

Length 559 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MKS1Q9NXB0 MYZAP-201ENST00000267853 2361 ntAPPRIS P3 TSL 1 (best) BASIC18.4■□□□□ 0.54
MKS1Q9NXB0 RHOB-201ENST00000272233 2372 ntAPPRIS P1 BASIC18.4■□□□□ 0.54
MKS1Q9NXB0 ENTPD2-202ENST00000355097 2095 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
MKS1Q9NXB0 SATB2-203ENST00000428695 2135 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
MKS1Q9NXB0 MAPKAPK3-201ENST00000357955 2500 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
MKS1Q9NXB0 GPANK1-204ENST00000375900 1814 ntAPPRIS P1 TSL 2 BASIC18.39■□□□□ 0.54
MKS1Q9NXB0 C9orf66-201ENST00000382387 2918 ntAPPRIS P1 BASIC18.39■□□□□ 0.54
MKS1Q9NXB0 HSPB6-201ENST00000004982 1457 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.54
MKS1Q9NXB0 GAB1-201ENST00000262994 2648 ntAPPRIS ALT1 TSL 1 (best) BASIC18.39■□□□□ 0.54
MKS1Q9NXB0 ETNK2-203ENST00000367202 2434 ntAPPRIS P3 TSL 1 (best) BASIC18.39■□□□□ 0.53
MKS1Q9NXB0 SLC23A3-203ENST00000409878 2010 ntAPPRIS P1 TSL 2 BASIC18.39■□□□□ 0.53
MKS1Q9NXB0 HLA-DQB1-201ENST00000374943 1656 ntBASIC18.39■□□□□ 0.53
MKS1Q9NXB0 PTPMT1-202ENST00000326674 768 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
MKS1Q9NXB0 AFG3L1P-203ENST00000418696 2965 ntTSL 2 BASIC18.39■□□□□ 0.53
MKS1Q9NXB0 NIFKP9-201ENST00000419265 221 ntBASIC18.39■□□□□ 0.53
MKS1Q9NXB0 NELFE-206ENST00000444811 1202 ntAPPRIS ALT2 TSL 2 BASIC18.39■□□□□ 0.53
MKS1Q9NXB0 HOXB-AS3-204ENST00000466037 522 ntTSL 3 BASIC18.39■□□□□ 0.53
MKS1Q9NXB0 AC091390.4-202ENST00000476426 537 ntBASIC18.39■□□□□ 0.53
MKS1Q9NXB0 FAM163B-202ENST00000496132 811 ntAPPRIS P1 TSL 3 BASIC18.39■□□□□ 0.53
MKS1Q9NXB0 ADGRD1-AS1-202ENST00000542980 1277 ntTSL 4 BASIC18.39■□□□□ 0.53
MKS1Q9NXB0 MARK4-210ENST00000620044 2105 ntTSL 5 BASIC18.39■□□□□ 0.53
MKS1Q9NXB0 DHRS2-201ENST00000250383 1705 ntAPPRIS P3 TSL 1 (best) BASIC18.39■□□□□ 0.53
MKS1Q9NXB0 TMEM177-204ENST00000424086 1738 ntAPPRIS P1 TSL 2 BASIC18.39■□□□□ 0.53
MKS1Q9NXB0 SERPINE2-206ENST00000447280 1716 ntTSL 2 BASIC18.39■□□□□ 0.53
MKS1Q9NXB0 NDUFS7-210ENST00000539480 1743 ntTSL 2 BASIC18.39■□□□□ 0.53
MKS1Q9NXB0 AC008687.8-201ENST00000599795 1748 ntAPPRIS P1 TSL 2 BASIC18.39■□□□□ 0.53
MKS1Q9NXB0 KLF6-204ENST00000469435 2169 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
MKS1Q9NXB0 PRORSD1P-202ENST00000563365 2154 ntBASIC18.39■□□□□ 0.53
MKS1Q9NXB0 PTPRE-201ENST00000254667 5331 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
MKS1Q9NXB0 C3orf18-201ENST00000357203 2655 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
MKS1Q9NXB0 LYSMD4-201ENST00000332728 2847 ntTSL 4 BASIC18.39■□□□□ 0.53
MKS1Q9NXB0 CCNI2-201ENST00000378731 2355 ntAPPRIS P3 TSL 1 (best) BASIC18.39■□□□□ 0.53
MKS1Q9NXB0 MIPEP-201ENST00000382172 2400 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
MKS1Q9NXB0 UBAP1-203ENST00000379186 2524 ntTSL 5 BASIC18.39■□□□□ 0.53
MKS1Q9NXB0 C18orf8-208ENST00000590868 2002 ntTSL 2 BASIC18.39■□□□□ 0.53
MKS1Q9NXB0 ADCY6-206ENST00000550422 5877 ntTSL 2 BASIC18.38■□□□□ 0.53
MKS1Q9NXB0 CCDC88C-203ENST00000389856 1641 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
MKS1Q9NXB0 LGALS12-203ENST00000394618 1618 ntAPPRIS P3 TSL 1 (best) BASIC18.38■□□□□ 0.53
MKS1Q9NXB0 KCNIP4-206ENST00000447367 1641 ntTSL 5 BASIC18.38■□□□□ 0.53
MKS1Q9NXB0 TOR3A-203ENST00000367627 2724 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
MKS1Q9NXB0 TMSB4Y-201ENST00000284856 1669 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
MKS1Q9NXB0 EVX2-201ENST00000308618 4203 ntAPPRIS P1 TSL 5 BASIC18.38■□□□□ 0.53
MKS1Q9NXB0 COX7A1-201ENST00000292907 762 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
MKS1Q9NXB0 ENSA-205ENST00000361532 792 ntTSL 2 BASIC18.38■□□□□ 0.53
MKS1Q9NXB0 AC140479.4-201ENST00000561715 463 ntTSL 4 BASIC18.38■□□□□ 0.53
MKS1Q9NXB0 CAPNS1-205ENST00000588780 1035 ntAPPRIS ALT2 TSL 5 BASIC18.38■□□□□ 0.53
MKS1Q9NXB0 AC010336.4-201ENST00000595655 438 ntTSL 5 BASIC18.38■□□□□ 0.53
MKS1Q9NXB0 CD24-202ENST00000610952 802 ntAPPRIS P3 TSL 2 BASIC18.38■□□□□ 0.53
MKS1Q9NXB0 CMTM3-214ENST00000567572 1934 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
MKS1Q9NXB0 HOXD12-202ENST00000406506 1318 ntAPPRIS P1 TSL 3 BASIC18.38■□□□□ 0.53
MKS1Q9NXB0 IFFO1-201ENST00000336604 2686 ntAPPRIS P3 TSL 1 (best) BASIC18.38■□□□□ 0.53
MKS1Q9NXB0 SLC23A3-207ENST00000455516 2048 ntTSL 2 BASIC18.38■□□□□ 0.53
MKS1Q9NXB0 MFSD14A-201ENST00000370152 2777 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
MKS1Q9NXB0 ADGRA2-201ENST00000315215 6270 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
MKS1Q9NXB0 APBB1-215ENST00000608394 2128 ntTSL 5 BASIC18.38■□□□□ 0.53
MKS1Q9NXB0 APBB1-222ENST00000610474 2147 ntTSL 5 BASIC18.38■□□□□ 0.53
MKS1Q9NXB0 CORO6-212ENST00000584969 1416 ntAPPRIS ALT1 TSL 5 BASIC18.38■□□□□ 0.53
MKS1Q9NXB0 MARK2-209ENST00000509502 2862 ntAPPRIS ALT2 TSL 2 BASIC18.38■□□□□ 0.53
MKS1Q9NXB0 FLT1-207ENST00000615840 6453 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
MKS1Q9NXB0 CDK5R1-201ENST00000313401 4325 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
MKS1Q9NXB0 WIF1-201ENST00000286574 2238 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
MKS1Q9NXB0 NRG2-205ENST00000361474 3020 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
MKS1Q9NXB0 DVL2-201ENST00000005340 3018 ntAPPRIS P2 TSL 1 (best) BASIC18.38■□□□□ 0.53
MKS1Q9NXB0 ARMC10-209ENST00000454559 2347 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
MKS1Q9NXB0 ACOXL-205ENST00000439055 2373 ntTSL 2 BASIC18.38■□□□□ 0.53
MKS1Q9NXB0 TPGS2-219ENST00000593035 1727 ntAPPRIS ALT2 TSL 2 BASIC18.37■□□□□ 0.53
MKS1Q9NXB0 SCARB1-208ENST00000544327 1812 ntTSL 5 BASIC18.37■□□□□ 0.53
MKS1Q9NXB0 PANX1-202ENST00000436171 2750 ntAPPRIS ALT1 TSL 1 (best) BASIC18.37■□□□□ 0.53
MKS1Q9NXB0 FAM53A-207ENST00000489363 2776 ntTSL 2 BASIC18.37■□□□□ 0.53
MKS1Q9NXB0 AC096719.1-201ENST00000510705 1874 ntTSL 5 BASIC18.37■□□□□ 0.53
MKS1Q9NXB0 TRIM8-201ENST00000302424 2831 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
MKS1Q9NXB0 ADAMTS8-201ENST00000257359 4010 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
MKS1Q9NXB0 AC007192.1-201ENST00000593731 5142 ntAPPRIS P1 TSL 2 BASIC18.37■□□□□ 0.53
MKS1Q9NXB0 FAM53A-205ENST00000472884 2086 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
MKS1Q9NXB0 CNTNAP3B-203ENST00000377561 5379 ntAPPRIS P2 TSL 1 (best) BASIC18.37■□□□□ 0.53
MKS1Q9NXB0 TAF9-201ENST00000217893 1283 ntAPPRIS P2 TSL 1 (best) BASIC18.37■□□□□ 0.53
MKS1Q9NXB0 OGG1-209ENST00000383826 1069 ntTSL 5 BASIC18.37■□□□□ 0.53
MKS1Q9NXB0 AC226101.2-201ENST00000458252 747 ntTSL 2 BASIC18.37■□□□□ 0.53
MKS1Q9NXB0 ATP6V0E1-204ENST00000519911 718 ntTSL 2 BASIC18.37■□□□□ 0.53
MKS1Q9NXB0 CKBP1-201ENST00000565489 1086 ntBASIC18.37■□□□□ 0.53
MKS1Q9NXB0 RPL23AP53-202ENST00000606507 370 ntTSL 3 BASIC18.37■□□□□ 0.53
MKS1Q9NXB0 SMN1-209ENST00000514951 1308 ntTSL 2 BASIC18.37■□□□□ 0.53
MKS1Q9NXB0 ADGRL1-202ENST00000361434 5610 ntAPPRIS P3 TSL 1 (best) BASIC18.37■□□□□ 0.53
MKS1Q9NXB0 BPIFB3-201ENST00000375494 1454 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
MKS1Q9NXB0 ENDOV-225ENST00000522751 1475 ntTSL 5 BASIC18.37■□□□□ 0.53
MKS1Q9NXB0 EFEMP2-210ENST00000528176 1504 ntTSL 5 BASIC18.37■□□□□ 0.53
MKS1Q9NXB0 OGFOD2-212ENST00000538755 1949 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
MKS1Q9NXB0 BFSP1-201ENST00000377868 2063 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
MKS1Q9NXB0 SLC47A2-202ENST00000350657 2285 ntAPPRIS ALT2 TSL 1 (best) BASIC18.37■□□□□ 0.53
MKS1Q9NXB0 WNT5B-202ENST00000397196 2303 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
MKS1Q9NXB0 PCDHA8-201ENST00000378123 2616 ntAPPRIS ALT2 BASIC18.36■□□□□ 0.53
MKS1Q9NXB0 RAB40C-205ENST00000539661 2609 ntAPPRIS P1 TSL 3 BASIC18.36■□□□□ 0.53
MKS1Q9NXB0 VHL-202ENST00000345392 2696 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
MKS1Q9NXB0 EHMT1-204ENST00000462484 2707 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
MKS1Q9NXB0 ACTN3-203ENST00000513398 2939 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
MKS1Q9NXB0 PRRT1-201ENST00000211413 1909 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
MKS1Q9NXB0 TMEM214-201ENST00000238788 2990 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
MKS1Q9NXB0 CD70-201ENST00000245903 913 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
MKS1Q9NXB0 GPRIN2-201ENST00000374314 1696 ntAPPRIS P1 BASIC18.36■□□□□ 0.53
MKS1Q9NXB0 SLC5A10-204ENST00000395647 2140 ntTSL 2 BASIC18.36■□□□□ 0.53
Retrieved 100 of 98,524 protein–RNA pairs in 61.9 ms