Protein–RNA interactions for Protein: Q9NR64

KLHL1, Kelch-like protein 1, humanhuman

Predictions only

Length 748 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KLHL1Q9NR64 ZNF302-214ENST00000613363 2893 ntAPPRIS ALT2 TSL 4 BASIC17.53■□□□□ 0.4
KLHL1Q9NR64 MPV17L-201ENST00000287594 5820 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
KLHL1Q9NR64 HERPUD2-201ENST00000311350 2474 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
KLHL1Q9NR64 FO681492.1-203ENST00000622861 1362 ntAPPRIS ALT2 TSL 5 BASIC17.53■□□□□ 0.4
KLHL1Q9NR64 SLC1A6-210ENST00000600144 1735 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
KLHL1Q9NR64 HSD11B1L-221ENST00000583928 1319 ntTSL 5 BASIC17.52■□□□□ 0.4
KLHL1Q9NR64 CHMP6-201ENST00000325167 1664 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
KLHL1Q9NR64 EVL-202ENST00000402714 2353 ntAPPRIS ALT1 TSL 1 (best) BASIC17.52■□□□□ 0.4
KLHL1Q9NR64 SNX4-201ENST00000251775 2513 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
KLHL1Q9NR64 PRKAR2A-206ENST00000454963 1849 ntAPPRIS P1 TSL 2 BASIC17.52■□□□□ 0.4
KLHL1Q9NR64 LAG3-201ENST00000203629 1974 ntAPPRIS P2 TSL 1 (best) BASIC17.52■□□□□ 0.4
KLHL1Q9NR64 PEX11G-201ENST00000221480 1062 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
KLHL1Q9NR64 TRPT1-202ENST00000394546 1058 ntAPPRIS ALT1 TSL 5 BASIC17.52■□□□□ 0.4
KLHL1Q9NR64 MRPL53-202ENST00000409710 386 ntTSL 2 BASIC17.52■□□□□ 0.4
KLHL1Q9NR64 CD70-202ENST00000423145 881 ntTSL 2 BASIC17.52■□□□□ 0.4
KLHL1Q9NR64 AC117947.1-201ENST00000427448 529 ntBASIC17.52■□□□□ 0.4
KLHL1Q9NR64 LINC01381-201ENST00000431650 466 ntTSL 3 BASIC17.52■□□□□ 0.4
KLHL1Q9NR64 WDR45-218ENST00000473974 1077 ntTSL 5 BASIC17.52■□□□□ 0.4
KLHL1Q9NR64 AC009185.1-201ENST00000517634 911 ntTSL 3 BASIC17.52■□□□□ 0.4
KLHL1Q9NR64 TRPT1-210ENST00000541278 941 ntTSL 2 BASIC17.52■□□□□ 0.4
KLHL1Q9NR64 AL353719.1-201ENST00000566847 864 ntBASIC17.52■□□□□ 0.4
KLHL1Q9NR64 KANSL1-AS1-203ENST00000572973 424 ntTSL 3 BASIC17.52■□□□□ 0.4
KLHL1Q9NR64 SUSD3-205ENST00000617293 1076 ntAPPRIS ALT2 TSL 3 BASIC17.52■□□□□ 0.4
KLHL1Q9NR64 TBXA2R-201ENST00000375190 2608 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
KLHL1Q9NR64 KRT8P11-201ENST00000409686 1436 ntBASIC17.52■□□□□ 0.4
KLHL1Q9NR64 CYP2E1-205ENST00000463117 1912 ntAPPRIS P1 TSL 5 BASIC17.52■□□□□ 0.4
KLHL1Q9NR64 AC004982.2-201ENST00000609497 1578 ntTSL 2 BASIC17.52■□□□□ 0.39
KLHL1Q9NR64 KDM5C-204ENST00000375401 6031 ntAPPRIS P3 TSL 1 (best) BASIC17.52■□□□□ 0.39
KLHL1Q9NR64 GABRD-205ENST00000638771 1707 ntAPPRIS ALT2 TSL 3 BASIC17.52■□□□□ 0.39
KLHL1Q9NR64 RNF146-203ENST00000368314 2369 ntAPPRIS ALT1 TSL 2 BASIC17.52■□□□□ 0.39
KLHL1Q9NR64 LGALS9-202ENST00000313648 1378 ntTSL 3 BASIC17.52■□□□□ 0.39
KLHL1Q9NR64 DSCC1-201ENST00000313655 2314 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
KLHL1Q9NR64 NEFHP1-201ENST00000412845 2629 ntBASIC17.51■□□□□ 0.39
KLHL1Q9NR64 FARP1-242ENST00000627049 5103 ntTSL 5 BASIC17.51■□□□□ 0.39
KLHL1Q9NR64 DHRSX-201ENST00000334651 2571 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
KLHL1Q9NR64 IFNLR1-202ENST00000327575 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC17.51■□□□□ 0.39
KLHL1Q9NR64 DOC2A-209ENST00000564979 1630 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
KLHL1Q9NR64 PTPDC1-202ENST00000375360 4517 ntAPPRIS ALT2 TSL 1 (best) BASIC17.51■□□□□ 0.39
KLHL1Q9NR64 TRAM1L1-201ENST00000310754 2023 ntAPPRIS P1 BASIC17.51■□□□□ 0.39
KLHL1Q9NR64 MCRS1-202ENST00000357123 1428 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
KLHL1Q9NR64 TIMM17B-201ENST00000376582 950 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
KLHL1Q9NR64 RASGRP2-205ENST00000377489 583 ntTSL 3 BASIC17.51■□□□□ 0.39
KLHL1Q9NR64 FAM213B-201ENST00000378424 2765 ntAPPRIS ALT2 TSL 5 BASIC17.51■□□□□ 0.39
KLHL1Q9NR64 RTBDN-202ENST00000393233 1000 ntAPPRIS ALT2 TSL 3 BASIC17.51■□□□□ 0.39
KLHL1Q9NR64 SNCB-202ENST00000393693 1234 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
KLHL1Q9NR64 GSTZ1-204ENST00000393734 1424 ntTSL 5 BASIC17.51■□□□□ 0.39
KLHL1Q9NR64 P3H4-202ENST00000393928 2601 ntAPPRIS P2 TSL 1 (best) BASIC17.51■□□□□ 0.39
KLHL1Q9NR64 PRICKLE4-202ENST00000394260 1035 ntAPPRIS ALT2 TSL 2 BASIC17.51■□□□□ 0.39
KLHL1Q9NR64 PRICKLE4-203ENST00000394263 1155 ntAPPRIS P2 TSL 5 BASIC17.51■□□□□ 0.39
KLHL1Q9NR64 COBL-202ENST00000395540 2332 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
KLHL1Q9NR64 GOLGA2P7-203ENST00000557881 896 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
KLHL1Q9NR64 TPM1-226ENST00000560959 925 ntTSL 2 BASIC17.51■□□□□ 0.39
KLHL1Q9NR64 GOLGA2P10-205ENST00000618267 983 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
KLHL1Q9NR64 KDSR-202ENST00000406396 5447 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
KLHL1Q9NR64 REPS2-201ENST00000303843 7771 ntAPPRIS ALT2 TSL 1 (best) BASIC17.51■□□□□ 0.39
KLHL1Q9NR64 NKX2-1-203ENST00000518149 2583 ntAPPRIS P1 TSL 5 BASIC17.51■□□□□ 0.39
KLHL1Q9NR64 IGSF9B-206ENST00000533871 5050 ntAPPRIS P2 TSL 5 BASIC17.51■□□□□ 0.39
KLHL1Q9NR64 RAB1A-204ENST00000409892 2254 ntTSL 2 BASIC17.51■□□□□ 0.39
KLHL1Q9NR64 SLC25A51-202ENST00000377716 1691 ntAPPRIS P1 TSL 3 BASIC17.51■□□□□ 0.39
KLHL1Q9NR64 ST3GAL4-205ENST00000449406 1669 ntTSL 5 BASIC17.51■□□□□ 0.39
KLHL1Q9NR64 NEURL1B-201ENST00000369800 6424 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
KLHL1Q9NR64 PLCG1-AS1-201ENST00000454626 1462 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
KLHL1Q9NR64 LRRC58-201ENST00000295628 7903 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
KLHL1Q9NR64 PRKCSH-209ENST00000589838 1898 ntAPPRIS P3 TSL 1 (best) BASIC17.5■□□□□ 0.39
KLHL1Q9NR64 ETV4-201ENST00000319349 2429 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
KLHL1Q9NR64 IFRD2-202ENST00000417626 2109 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
KLHL1Q9NR64 MLF2-201ENST00000203630 1969 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
KLHL1Q9NR64 SNAP91-201ENST00000195649 4434 ntAPPRIS ALT2 TSL 5 BASIC17.5■□□□□ 0.39
KLHL1Q9NR64 SNAP91-204ENST00000369694 4449 ntAPPRIS P2 TSL 5 BASIC17.5■□□□□ 0.39
KLHL1Q9NR64 KRT17-205ENST00000540235 1438 ntTSL 5 BASIC17.5■□□□□ 0.39
KLHL1Q9NR64 SPON2-203ENST00000431380 1802 ntAPPRIS P1 TSL 5 BASIC17.5■□□□□ 0.39
KLHL1Q9NR64 MRPL52-201ENST00000311892 1042 ntTSL 3 BASIC17.5■□□□□ 0.39
KLHL1Q9NR64 DNAJC4-201ENST00000321460 1015 ntAPPRIS ALT2 TSL 1 (best) BASIC17.5■□□□□ 0.39
KLHL1Q9NR64 PBXIP1-201ENST00000368460 1175 ntAPPRIS ALT2 TSL 3 BASIC17.5■□□□□ 0.39
KLHL1Q9NR64 AC004540.1-203ENST00000421862 907 ntTSL 5 BASIC17.5■□□□□ 0.39
KLHL1Q9NR64 AC037459.1-202ENST00000430850 531 ntAPPRIS P1 TSL 4 BASIC17.5■□□□□ 0.39
KLHL1Q9NR64 AC005056.1-201ENST00000435932 532 ntTSL 4 BASIC17.5■□□□□ 0.39
KLHL1Q9NR64 CDKN2AIPNL-202ENST00000458198 1223 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
KLHL1Q9NR64 ROPN1L-202ENST00000503804 1291 ntAPPRIS P1 TSL 2 BASIC17.5■□□□□ 0.39
KLHL1Q9NR64 AP003041.3-201ENST00000527151 707 ntBASIC17.5■□□□□ 0.39
KLHL1Q9NR64 CYB561D2-210ENST00000607121 1004 ntTSL 2 BASIC17.5■□□□□ 0.39
KLHL1Q9NR64 COLCA2-205ENST00000614153 1264 ntTSL 3 BASIC17.5■□□□□ 0.39
KLHL1Q9NR64 AL138966.2-201ENST00000621997 464 ntBASIC17.5■□□□□ 0.39
KLHL1Q9NR64 TRMT2A-203ENST00000404751 2498 ntAPPRIS ALT2 TSL 2 BASIC17.5■□□□□ 0.39
KLHL1Q9NR64 NECAB3-202ENST00000375238 1942 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
KLHL1Q9NR64 PROSER1-201ENST00000352251 5168 ntAPPRIS P2 TSL 1 (best) BASIC17.5■□□□□ 0.39
KLHL1Q9NR64 CASTOR1-202ENST00000407689 1623 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
KLHL1Q9NR64 SPHK1-207ENST00000590959 1851 ntAPPRIS ALT2 TSL 1 (best) BASIC17.5■□□□□ 0.39
KLHL1Q9NR64 ITGB7-209ENST00000550743 2138 ntTSL 5 BASIC17.5■□□□□ 0.39
KLHL1Q9NR64 GALE-201ENST00000374497 1488 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
KLHL1Q9NR64 DDHD1-201ENST00000323669 5503 ntTSL 2 BASIC17.49■□□□□ 0.39
KLHL1Q9NR64 PTGES2-214ENST00000617202 1344 ntTSL 5 BASIC17.49■□□□□ 0.39
KLHL1Q9NR64 GOLGA2P10-204ENST00000618004 1349 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
KLHL1Q9NR64 SEPT6-202ENST00000354228 1576 ntAPPRIS P4 TSL 1 (best) BASIC17.49■□□□□ 0.39
KLHL1Q9NR64 IRF7-203ENST00000397566 2051 ntAPPRIS P4 TSL 1 (best) BASIC17.49■□□□□ 0.39
KLHL1Q9NR64 UBFD1-201ENST00000395878 5110 ntAPPRIS P2 TSL 2 BASIC17.49■□□□□ 0.39
KLHL1Q9NR64 ENTPD6-202ENST00000360031 2766 ntAPPRIS ALT2 TSL 1 (best) BASIC17.49■□□□□ 0.39
KLHL1Q9NR64 WIPF1-202ENST00000359761 2003 ntAPPRIS P2 TSL 1 (best) BASIC17.49■□□□□ 0.39
KLHL1Q9NR64 PDIA5-201ENST00000316218 1799 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
KLHL1Q9NR64 AC104417.2-201ENST00000562989 1793 ntBASIC17.49■□□□□ 0.39
Retrieved 100 of 98,524 protein–RNA pairs in 58.3 ms