Protein–RNA interactions for Protein: Q9NQC3

RTN4, Reticulon-4, humanhuman

Known RBP Predictions only

Length 1,192 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4Q9NQC3 MYB-203ENST00000341911 3672 ntAPPRIS ALT1 TSL 1 (best) BASIC21.94■■□□□ 1.1
RTN4Q9NQC3 KCTD20-202ENST00000373731 5619 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
RTN4Q9NQC3 RAB5C-202ENST00000393860 1912 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
RTN4Q9NQC3 AC005253.1-201ENST00000597411 2001 ntTSL 4 BASIC21.94■■□□□ 1.1
RTN4Q9NQC3 MINPP1-201ENST00000371994 2183 ntTSL 1 (best) BASIC21.94■■□□□ 1.1
RTN4Q9NQC3 STRADB-202ENST00000392249 2190 ntTSL 1 (best) BASIC21.94■■□□□ 1.1
RTN4Q9NQC3 SHANK1-204ENST00000391814 6622 ntAPPRIS ALT2 TSL 5 BASIC21.94■■□□□ 1.1
RTN4Q9NQC3 ISLR2-202ENST00000419208 2306 ntTSL 1 (best) BASIC21.94■■□□□ 1.1
RTN4Q9NQC3 PPP1R7-201ENST00000234038 2386 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
RTN4Q9NQC3 ZNF30-202ENST00000439785 2651 ntAPPRIS P4 TSL 5 BASIC21.93■■□□□ 1.1
RTN4Q9NQC3 AGK-211ENST00000629555 2765 ntTSL 5 BASIC21.93■■□□□ 1.1
RTN4Q9NQC3 SMCHD1-201ENST00000320876 8821 ntAPPRIS P1 TSL 5 BASIC21.93■■□□□ 1.1
RTN4Q9NQC3 NEO1-201ENST00000261908 7088 ntAPPRIS P3 TSL 1 (best) BASIC21.93■■□□□ 1.1
RTN4Q9NQC3 WIPF1-201ENST00000272746 3028 ntAPPRIS ALT2 TSL 1 (best) BASIC21.93■■□□□ 1.1
RTN4Q9NQC3 NAT9-201ENST00000357814 1875 ntTSL 1 (best) BASIC21.93■■□□□ 1.1
RTN4Q9NQC3 CDK8-201ENST00000381527 3055 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
RTN4Q9NQC3 GDNF-203ENST00000381826 778 ntTSL 1 (best) BASIC21.93■■□□□ 1.1
RTN4Q9NQC3 GDNF-204ENST00000427982 856 ntTSL 1 (best) BASIC21.93■■□□□ 1.1
RTN4Q9NQC3 FEZF1-AS1-202ENST00000428449 2653 ntTSL 2 BASIC21.93■■□□□ 1.1
RTN4Q9NQC3 EXTL3-213ENST00000523149 1779 ntTSL 5 BASIC21.93■■□□□ 1.1
RTN4Q9NQC3 MUS81-215ENST00000533035 2180 ntTSL 5 BASIC21.93■■□□□ 1.1
RTN4Q9NQC3 AC011446.1-201ENST00000591825 458 ntTSL 2 BASIC21.93■■□□□ 1.1
RTN4Q9NQC3 GSX2-205ENST00000611459 1262 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
RTN4Q9NQC3 ADAM23-201ENST00000264377 6330 ntAPPRIS P2 TSL 1 (best) BASIC21.93■■□□□ 1.1
RTN4Q9NQC3 FDX1-201ENST00000260270 3206 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
RTN4Q9NQC3 TBC1D2B-201ENST00000300584 6067 ntAPPRIS ALT2 TSL 5 BASIC21.93■■□□□ 1.1
RTN4Q9NQC3 AK1-203ENST00000373176 2266 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
RTN4Q9NQC3 TRIM15-207ENST00000376694 2214 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
RTN4Q9NQC3 ABR-203ENST00000536794 2213 ntTSL 2 BASIC21.92■■□□□ 1.1
RTN4Q9NQC3 LINC01569-202ENST00000573042 2093 ntTSL 2 BASIC21.92■■□□□ 1.1
RTN4Q9NQC3 SSR1-204ENST00000474597 1808 ntTSL 5 BASIC21.92■■□□□ 1.1
RTN4Q9NQC3 HEXDC-203ENST00000577944 1820 ntTSL 5 BASIC21.92■■□□□ 1.1
RTN4Q9NQC3 ADRM1-201ENST00000253003 1478 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
RTN4Q9NQC3 CYP21A1P-202ENST00000354927 1481 ntBASIC21.92■■□□□ 1.1
RTN4Q9NQC3 MOB3C-202ENST00000319928 2822 ntAPPRIS P1 TSL 2 BASIC21.92■■□□□ 1.1
RTN4Q9NQC3 SREBF1-201ENST00000261646 4178 ntAPPRIS P3 TSL 1 (best) BASIC21.92■■□□□ 1.1
RTN4Q9NQC3 CRAT-201ENST00000318080 2763 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
RTN4Q9NQC3 TMTC2-203ENST00000548305 2682 ntTSL 1 (best) BASIC21.92■■□□□ 1.1
RTN4Q9NQC3 CT47B1-201ENST00000371311 1328 ntAPPRIS P1 TSL 5 BASIC21.92■■□□□ 1.1
RTN4Q9NQC3 ARFGAP2-229ENST00000627920 2613 ntTSL 2 BASIC21.92■■□□□ 1.1
RTN4Q9NQC3 DNAJC27-AS1-204ENST00000428614 780 ntTSL 3 BASIC21.92■■□□□ 1.1
RTN4Q9NQC3 UQCRFS1P1-201ENST00000435169 820 ntBASIC21.92■■□□□ 1.1
RTN4Q9NQC3 AC116337.3-201ENST00000505200 846 ntTSL 3 BASIC21.92■■□□□ 1.1
RTN4Q9NQC3 CASP6-205ENST00000505486 538 ntTSL 4 BASIC21.92■■□□□ 1.1
RTN4Q9NQC3 AP001972.3-201ENST00000530792 495 ntTSL 3 BASIC21.92■■□□□ 1.1
RTN4Q9NQC3 ORAI3-202ENST00000562699 628 ntTSL 2 BASIC21.92■■□□□ 1.1
RTN4Q9NQC3 HTR4-213ENST00000631296 1224 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
RTN4Q9NQC3 MASTL-203ENST00000375946 3623 ntAPPRIS P3 TSL 1 (best) BASIC21.92■■□□□ 1.1
RTN4Q9NQC3 OGFOD2-207ENST00000536150 1956 ntTSL 2 BASIC21.92■■□□□ 1.1
RTN4Q9NQC3 FGFR3-208ENST00000481110 4217 ntTSL 1 (best) BASIC21.91■■□□□ 1.1
RTN4Q9NQC3 AP3D1-202ENST00000355272 5034 ntAPPRIS ALT2 TSL 1 (best) BASIC21.91■■□□□ 1.1
RTN4Q9NQC3 ANKRD65-204ENST00000520296 1632 ntTSL 1 (best) BASIC21.91■■□□□ 1.1
RTN4Q9NQC3 PTBP1P-201ENST00000554374 1601 ntBASIC21.91■■□□□ 1.1
RTN4Q9NQC3 PTTG1IP-203ENST00000397887 2413 ntTSL 4 BASIC21.91■■□□□ 1.1
RTN4Q9NQC3 FBF1-205ENST00000586717 4825 ntAPPRIS ALT2 TSL 5 BASIC21.91■■□□□ 1.1
RTN4Q9NQC3 NOX4-201ENST00000263317 2388 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
RTN4Q9NQC3 SLC44A3-201ENST00000271227 2388 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
RTN4Q9NQC3 ZNF746-201ENST00000340622 3806 ntAPPRIS P3 TSL 1 (best) BASIC21.91■■□□□ 1.1
RTN4Q9NQC3 GRB7-201ENST00000309156 2243 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
RTN4Q9NQC3 EEF1D-205ENST00000442189 2207 ntAPPRIS P4 TSL 1 (best) BASIC21.91■■□□□ 1.1
RTN4Q9NQC3 COL4A2-201ENST00000360467 6281 ntAPPRIS P1 TSL 5 BASIC21.91■■□□□ 1.1
RTN4Q9NQC3 ANTXR1-202ENST00000409349 1384 ntTSL 1 (best) BASIC21.91■■□□□ 1.1
RTN4Q9NQC3 ENC1-205ENST00000510316 5381 ntTSL 2 BASIC21.91■■□□□ 1.1
RTN4Q9NQC3 MAN2C1-244ENST00000618257 1346 ntTSL 5 BASIC21.91■■□□□ 1.1
RTN4Q9NQC3 KIAA1456-201ENST00000400069 1982 ntTSL 2 BASIC21.91■■□□□ 1.1
RTN4Q9NQC3 RNF135-201ENST00000324689 1905 ntTSL 1 (best) BASIC21.91■■□□□ 1.1
RTN4Q9NQC3 LYRM9-201ENST00000379102 501 ntAPPRIS P1 TSL 2 BASIC21.91■■□□□ 1.1
RTN4Q9NQC3 LYRM9-206ENST00000508862 807 ntTSL 3 BASIC21.91■■□□□ 1.1
RTN4Q9NQC3 TSEN15-207ENST00000533373 618 ntTSL 2 BASIC21.91■■□□□ 1.1
RTN4Q9NQC3 PPP1R14A-205ENST00000591585 949 ntTSL 2 BASIC21.91■■□□□ 1.1
RTN4Q9NQC3 AFAP1L2-202ENST00000369271 3964 ntAPPRIS ALT2 TSL 1 (best) BASIC21.91■■□□□ 1.1
RTN4Q9NQC3 NSUN2-201ENST00000264670 3303 ntAPPRIS P3 TSL 1 (best) BASIC21.91■■□□□ 1.1
RTN4Q9NQC3 SPIDR-227ENST00000541342 3311 ntAPPRIS ALT2 TSL 2 BASIC21.91■■□□□ 1.1
RTN4Q9NQC3 TCTN1-223ENST00000550703 2149 ntTSL 2 BASIC21.91■■□□□ 1.1
RTN4Q9NQC3 CDK4-201ENST00000257904 2076 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
RTN4Q9NQC3 ITGB2-207ENST00000397854 2592 ntTSL 1 (best) BASIC21.91■■□□□ 1.1
RTN4Q9NQC3 GOLGA2P9-203ENST00000600260 2033 ntTSL 1 (best) BASIC21.9■■□□□ 1.1
RTN4Q9NQC3 WDR81-206ENST00000446363 2968 ntTSL 1 (best) BASIC21.9■■□□□ 1.1
RTN4Q9NQC3 AL109910.2-201ENST00000607733 1953 ntTSL 2 BASIC21.9■■□□□ 1.1
RTN4Q9NQC3 MGA-212ENST00000619521 1496 ntTSL 1 (best) BASIC21.9■■□□□ 1.1
RTN4Q9NQC3 ERLEC1-201ENST00000185150 2433 ntAPPRIS P3 TSL 1 (best) BASIC21.9■■□□□ 1.1
RTN4Q9NQC3 CBR1-205ENST00000530908 1924 ntTSL 1 (best) BASIC21.9■■□□□ 1.1
RTN4Q9NQC3 ADAMTS18-201ENST00000282849 5913 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
RTN4Q9NQC3 CYP4F11-203ENST00000402119 3161 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
RTN4Q9NQC3 NINL-201ENST00000278886 4969 ntAPPRIS P3 TSL 1 (best) BASIC21.9■■□□□ 1.1
RTN4Q9NQC3 ZSCAN10-207ENST00000575108 2247 ntTSL 2 BASIC21.9■■□□□ 1.1
RTN4Q9NQC3 PARP1-202ENST00000366792 553 ntTSL 3 BASIC21.9■■□□□ 1.1
RTN4Q9NQC3 AC004882.1-201ENST00000416352 590 ntTSL 3 BASIC21.9■■□□□ 1.1
RTN4Q9NQC3 ANKRD6-204ENST00000447838 2968 ntAPPRIS P3 TSL 1 (best) BASIC21.9■■□□□ 1.1
RTN4Q9NQC3 TERF1P5-201ENST00000477545 1207 ntBASIC21.9■■□□□ 1.1
RTN4Q9NQC3 MVB12A-212ENST00000543795 1154 ntAPPRIS P1 TSL 5 BASIC21.9■■□□□ 1.1
RTN4Q9NQC3 AL591742.1-201ENST00000604433 565 ntBASIC21.9■■□□□ 1.1
RTN4Q9NQC3 PHF20L1-220ENST00000622263 3375 ntAPPRIS P1 TSL 5 BASIC21.9■■□□□ 1.1
RTN4Q9NQC3 TEX45-201ENST00000361664 1679 ntAPPRIS P2 TSL 1 (best) BASIC21.9■■□□□ 1.1
RTN4Q9NQC3 HNRNPLL-206ENST00000410076 1687 ntTSL 1 (best) BASIC21.9■■□□□ 1.1
RTN4Q9NQC3 SLC16A3-221ENST00000617373 2048 ntAPPRIS P1 TSL 5 BASIC21.9■■□□□ 1.1
RTN4Q9NQC3 SYBU-205ENST00000422135 3226 ntAPPRIS ALT2 TSL 5 BASIC21.9■■□□□ 1.1
RTN4Q9NQC3 SLC52A1-201ENST00000254853 2377 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
RTN4Q9NQC3 CCDC63-201ENST00000308208 1993 ntAPPRIS P3 TSL 2 BASIC21.9■■□□□ 1.1
RTN4Q9NQC3 PSMD8-201ENST00000215071 1553 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
Retrieved 100 of 98,524 protein–RNA pairs in 26.7 ms