Protein–RNA interactions for Protein: Q9HBG4

ATP6V0A4, V-type proton ATPase 116 kDa subunit a isoform 4, humanhuman

Predictions only

Length 840 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATP6V0A4Q9HBG4 TRAPPC12-202ENST00000382110 2483 ntAPPRIS P2 TSL 2 BASIC20.69■□□□□ 0.9
ATP6V0A4Q9HBG4 TOX2-205ENST00000423191 1709 ntTSL 2 BASIC20.69■□□□□ 0.9
ATP6V0A4Q9HBG4 UNG-202ENST00000336865 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC20.69■□□□□ 0.9
ATP6V0A4Q9HBG4 OGFOD2-201ENST00000228922 1780 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
ATP6V0A4Q9HBG4 SMPD1-203ENST00000527275 2188 ntAPPRIS P3 TSL 2 BASIC20.69■□□□□ 0.9
ATP6V0A4Q9HBG4 COL13A1-205ENST00000398978 3093 ntAPPRIS P4 TSL 5 BASIC20.69■□□□□ 0.9
ATP6V0A4Q9HBG4 AIRE-201ENST00000291582 2257 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
ATP6V0A4Q9HBG4 MARCH8-201ENST00000319836 5272 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
ATP6V0A4Q9HBG4 MARK1-203ENST00000402574 5273 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
ATP6V0A4Q9HBG4 AC034236.2-201ENST00000606662 1610 ntBASIC20.68■□□□□ 0.9
ATP6V0A4Q9HBG4 RPH3A-203ENST00000543106 2581 ntAPPRIS ALT2 TSL 2 BASIC20.68■□□□□ 0.9
ATP6V0A4Q9HBG4 MEF2B-201ENST00000409224 1683 ntTSL 2 BASIC20.68■□□□□ 0.9
ATP6V0A4Q9HBG4 RBFOX1-204ENST00000422070 1684 ntTSL 2 BASIC20.68■□□□□ 0.9
ATP6V0A4Q9HBG4 CD55-201ENST00000314754 2220 ntAPPRIS ALT2 TSL 1 (best) BASIC20.68■□□□□ 0.9
ATP6V0A4Q9HBG4 TLK2-202ENST00000343388 3227 ntAPPRIS ALT1 TSL 1 (best) BASIC20.68■□□□□ 0.9
ATP6V0A4Q9HBG4 SEMA3B-210ENST00000611067 2292 ntAPPRIS ALT2 TSL 1 (best) BASIC20.68■□□□□ 0.9
ATP6V0A4Q9HBG4 COMTD1-201ENST00000372538 976 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
ATP6V0A4Q9HBG4 KRTAP5-10-201ENST00000398531 1176 ntAPPRIS P1 BASIC20.68■□□□□ 0.9
ATP6V0A4Q9HBG4 UFD1-202ENST00000399523 1007 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
ATP6V0A4Q9HBG4 CT47A4-201ENST00000415858 1298 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
ATP6V0A4Q9HBG4 CT47A9-201ENST00000417256 1298 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
ATP6V0A4Q9HBG4 CT47A6-201ENST00000419194 1298 ntAPPRIS P1 TSL 5 BASIC20.68■□□□□ 0.9
ATP6V0A4Q9HBG4 CT47A10-201ENST00000430448 1298 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
ATP6V0A4Q9HBG4 DAP-202ENST00000432074 1048 ntTSL 2 BASIC20.68■□□□□ 0.9
ATP6V0A4Q9HBG4 KRT18P23-201ENST00000435622 1283 ntBASIC20.68■□□□□ 0.9
ATP6V0A4Q9HBG4 CT47A5-201ENST00000439466 1298 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
ATP6V0A4Q9HBG4 CT47A3-201ENST00000441330 1298 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
ATP6V0A4Q9HBG4 CT47A8-201ENST00000457977 1298 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
ATP6V0A4Q9HBG4 CT47A2-201ENST00000458218 1298 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
ATP6V0A4Q9HBG4 SNX5-210ENST00000481323 562 ntTSL 3 BASIC20.68■□□□□ 0.9
ATP6V0A4Q9HBG4 AF186192.2-201ENST00000524514 423 ntTSL 3 BASIC20.68■□□□□ 0.9
ATP6V0A4Q9HBG4 CD81-212ENST00000526072 1172 ntTSL 5 BASIC20.68■□□□□ 0.9
ATP6V0A4Q9HBG4 AC027682.5-201ENST00000567122 530 ntTSL 3 BASIC20.68■□□□□ 0.9
ATP6V0A4Q9HBG4 TMEM220-AS1-201ENST00000579114 575 ntTSL 4 BASIC20.68■□□□□ 0.9
ATP6V0A4Q9HBG4 AC239803.1-201ENST00000594189 1278 ntTSL 5 BASIC20.68■□□□□ 0.9
ATP6V0A4Q9HBG4 LINC01356-201ENST00000401018 1819 ntTSL 2 BASIC20.68■□□□□ 0.9
ATP6V0A4Q9HBG4 CYB561-205ENST00000542042 1302 ntTSL 2 BASIC20.68■□□□□ 0.9
ATP6V0A4Q9HBG4 NAT8L-201ENST00000331662 5571 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
ATP6V0A4Q9HBG4 LARGE2-201ENST00000325468 2522 ntAPPRIS P3 TSL 1 (best) BASIC20.68■□□□□ 0.9
ATP6V0A4Q9HBG4 P2RX5-203ENST00000547178 1998 ntAPPRIS ALT2 TSL 1 (best) BASIC20.68■□□□□ 0.9
ATP6V0A4Q9HBG4 RAB29-205ENST00000446390 1441 ntTSL 2 BASIC20.68■□□□□ 0.9
ATP6V0A4Q9HBG4 KRT8P7-201ENST00000533003 1432 ntBASIC20.68■□□□□ 0.9
ATP6V0A4Q9HBG4 SPAG4-201ENST00000374273 1453 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
ATP6V0A4Q9HBG4 PITX2-203ENST00000355080 2100 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
ATP6V0A4Q9HBG4 BDKRB1-202ENST00000553356 1526 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
ATP6V0A4Q9HBG4 MFSD1-201ENST00000264266 1594 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
ATP6V0A4Q9HBG4 ZNF655-202ENST00000320583 1601 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
ATP6V0A4Q9HBG4 ISYNA1-206ENST00000578963 1691 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
ATP6V0A4Q9HBG4 GAS6-201ENST00000327773 2490 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
ATP6V0A4Q9HBG4 AL357033.4-201ENST00000617703 1807 ntBASIC20.67■□□□□ 0.9
ATP6V0A4Q9HBG4 UBTF-203ENST00000393606 2683 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
ATP6V0A4Q9HBG4 GUCA1A-205ENST00000541991 1921 ntTSL 5 BASIC20.67■□□□□ 0.9
ATP6V0A4Q9HBG4 PCGF6-201ENST00000337211 1950 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
ATP6V0A4Q9HBG4 BCL2L10-201ENST00000260442 1249 ntAPPRIS P3 TSL 1 (best) BASIC20.67■□□□□ 0.9
ATP6V0A4Q9HBG4 ST6GALNAC4P1-201ENST00000435385 499 ntBASIC20.67■□□□□ 0.9
ATP6V0A4Q9HBG4 AL445472.1-201ENST00000452532 1007 ntTSL 2 BASIC20.67■□□□□ 0.9
ATP6V0A4Q9HBG4 KLHL21-204ENST00000467612 1056 ntTSL 3 BASIC20.67■□□□□ 0.9
ATP6V0A4Q9HBG4 CNTD2-203ENST00000513948 787 ntAPPRIS ALT2 TSL 2 BASIC20.67■□□□□ 0.9
ATP6V0A4Q9HBG4 GRP-204ENST00000529320 824 ntAPPRIS ALT2 TSL 1 (best) BASIC20.67■□□□□ 0.9
ATP6V0A4Q9HBG4 AC021739.3-201ENST00000557908 855 ntTSL 2 BASIC20.67■□□□□ 0.9
ATP6V0A4Q9HBG4 PTGIR-204ENST00000596260 1009 ntTSL 2 BASIC20.67■□□□□ 0.9
ATP6V0A4Q9HBG4 PTOV1-AS1-201ENST00000596521 2155 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
ATP6V0A4Q9HBG4 ELP5-204ENST00000396628 1423 ntAPPRIS P2 TSL 1 (best) BASIC20.67■□□□□ 0.9
ATP6V0A4Q9HBG4 HOXB1-202ENST00000577092 1414 ntBASIC20.67■□□□□ 0.9
ATP6V0A4Q9HBG4 KLHDC4-227ENST00000622456 1422 ntTSL 5 BASIC20.67■□□□□ 0.9
ATP6V0A4Q9HBG4 STARD4-203ENST00000502322 1467 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
ATP6V0A4Q9HBG4 NCF1B-201ENST00000423083 1516 ntTSL 2 BASIC20.67■□□□□ 0.9
ATP6V0A4Q9HBG4 TMEM176A-210ENST00000484928 1530 ntAPPRIS P2 TSL 5 BASIC20.67■□□□□ 0.9
ATP6V0A4Q9HBG4 CNOT11-201ENST00000289382 2599 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
ATP6V0A4Q9HBG4 AC012615.6-201ENST00000593201 1697 ntTSL 2 BASIC20.67■□□□□ 0.9
ATP6V0A4Q9HBG4 VAV1-201ENST00000304076 2825 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
ATP6V0A4Q9HBG4 CD19-206ENST00000567541 1707 ntAPPRIS ALT2 TSL 1 (best) BASIC20.67■□□□□ 0.9
ATP6V0A4Q9HBG4 SLC31A2-201ENST00000259392 1785 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
ATP6V0A4Q9HBG4 Z98044.1-201ENST00000632503 1764 ntBASIC20.67■□□□□ 0.9
ATP6V0A4Q9HBG4 PCBP3-206ENST00000400314 2202 ntAPPRIS P2 TSL 5 BASIC20.66■□□□□ 0.9
ATP6V0A4Q9HBG4 SAMD11-211ENST00000616125 2230 ntAPPRIS ALT2 TSL 5 BASIC20.66■□□□□ 0.9
ATP6V0A4Q9HBG4 DDX59-201ENST00000331314 2289 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
ATP6V0A4Q9HBG4 MEPCE-202ENST00000414441 2261 ntTSL 2 BASIC20.66■□□□□ 0.9
ATP6V0A4Q9HBG4 MORF4L1-201ENST00000331268 2359 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
ATP6V0A4Q9HBG4 PCDHB14-202ENST00000624896 2367 ntTSL 2 BASIC20.66■□□□□ 0.9
ATP6V0A4Q9HBG4 LARGE2-206ENST00000529052 2459 ntAPPRIS ALT2 TSL 2 BASIC20.66■□□□□ 0.9
ATP6V0A4Q9HBG4 ZNF213-202ENST00000416391 2996 ntAPPRIS P1 TSL 5 BASIC20.66■□□□□ 0.9
ATP6V0A4Q9HBG4 TMEM171-201ENST00000287773 1247 ntAPPRIS ALT1 TSL 5 BASIC20.66■□□□□ 0.9
ATP6V0A4Q9HBG4 SMIM19-202ENST00000416469 691 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
ATP6V0A4Q9HBG4 DMKN-208ENST00000424570 1293 ntAPPRIS ALT2 TSL 1 (best) BASIC20.66■□□□□ 0.9
ATP6V0A4Q9HBG4 LINC01293-201ENST00000453951 1266 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
ATP6V0A4Q9HBG4 SEC1P-202ENST00000473944 940 ntBASIC20.66■□□□□ 0.9
ATP6V0A4Q9HBG4 FIS1-207ENST00000474120 915 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
ATP6V0A4Q9HBG4 AC008825.1-201ENST00000504398 452 ntTSL 3 BASIC20.66■□□□□ 0.9
ATP6V0A4Q9HBG4 KRT18P56-201ENST00000507275 550 ntBASIC20.66■□□□□ 0.9
ATP6V0A4Q9HBG4 AC005625.1-201ENST00000590304 472 ntTSL 3 BASIC20.66■□□□□ 0.9
ATP6V0A4Q9HBG4 DHRS2-210ENST00000611765 1287 ntAPPRIS ALT2 TSL 2 BASIC20.66■□□□□ 0.9
ATP6V0A4Q9HBG4 ZNF534-205ENST00000617900 1085 ntTSL 2 BASIC20.66■□□□□ 0.9
ATP6V0A4Q9HBG4 AL807752.6-202ENST00000622933 765 ntAPPRIS P5 TSL 3 BASIC20.66■□□□□ 0.9
ATP6V0A4Q9HBG4 MYOZ3-203ENST00000517768 1451 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
ATP6V0A4Q9HBG4 PNKP-224ENST00000631020 1545 ntTSL 5 BASIC20.66■□□□□ 0.9
ATP6V0A4Q9HBG4 PGAM1-201ENST00000334828 1830 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
ATP6V0A4Q9HBG4 PDE9A-206ENST00000380328 1875 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
ATP6V0A4Q9HBG4 TMEM155-201ENST00000337677 2313 ntAPPRIS P2 TSL 1 (best) BASIC20.66■□□□□ 0.9
ATP6V0A4Q9HBG4 MAFF-202ENST00000407965 2325 ntAPPRIS P1 TSL 2 BASIC20.66■□□□□ 0.9
Retrieved 100 of 98,524 protein–RNA pairs in 21.6 ms