Protein–RNA interactions for Protein: Q9H8M2

BRD9, Bromodomain-containing protein 9, humanhuman

Predictions only

Length 597 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BRD9Q9H8M2 NAT8L-201ENST00000331662 5571 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
BRD9Q9H8M2 PGAM1-201ENST00000334828 1830 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
BRD9Q9H8M2 ISYNA1-206ENST00000578963 1691 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
BRD9Q9H8M2 RASGRP2-211ENST00000394432 2304 ntAPPRIS P2 TSL 1 (best) BASIC19.2■□□□□ 0.66
BRD9Q9H8M2 HOXC4-201ENST00000303406 1524 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
BRD9Q9H8M2 LINC00634-201ENST00000381348 1510 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
BRD9Q9H8M2 AC093484.2-201ENST00000580996 2166 ntBASIC19.2■□□□□ 0.66
BRD9Q9H8M2 NLRP6-201ENST00000312165 2679 ntAPPRIS P3 TSL 1 (best) BASIC19.2■□□□□ 0.66
BRD9Q9H8M2 ZDHHC5-201ENST00000287169 4666 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
BRD9Q9H8M2 GDF5OS-201ENST00000374375 1734 ntAPPRIS P1 TSL 2 BASIC19.2■□□□□ 0.66
BRD9Q9H8M2 FAM83H-201ENST00000388913 5654 ntAPPRIS P1 TSL 5 BASIC19.2■□□□□ 0.66
BRD9Q9H8M2 UPF1-201ENST00000262803 5348 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
BRD9Q9H8M2 FFAR3-201ENST00000327809 1796 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
BRD9Q9H8M2 POU4F3-201ENST00000230732 1182 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
BRD9Q9H8M2 CARHSP1-201ENST00000311052 746 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
BRD9Q9H8M2 GSTO2-201ENST00000338595 1179 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
BRD9Q9H8M2 FAM239B-201ENST00000381106 1099 ntTSL 2 BASIC19.2■□□□□ 0.66
BRD9Q9H8M2 AP003733.1-201ENST00000491725 852 ntBASIC19.2■□□□□ 0.66
BRD9Q9H8M2 AC003688.1-201ENST00000577138 489 ntAPPRIS P1 TSL 3 BASIC19.2■□□□□ 0.66
BRD9Q9H8M2 AC090616.6-201ENST00000582640 721 ntBASIC19.2■□□□□ 0.66
BRD9Q9H8M2 PLAUR-214ENST00000601723 1205 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
BRD9Q9H8M2 LINC00454-206ENST00000609861 841 ntTSL 5 BASIC19.2■□□□□ 0.66
BRD9Q9H8M2 IGHV3-41-201ENST00000613121 348 ntBASIC19.2■□□□□ 0.66
BRD9Q9H8M2 CD24-206ENST00000620405 586 ntAPPRIS ALT2 TSL 2 BASIC19.2■□□□□ 0.66
BRD9Q9H8M2 C1orf43-210ENST00000640799 1287 ntTSL 5 BASIC19.2■□□□□ 0.66
BRD9Q9H8M2 WRB-201ENST00000333781 1616 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
BRD9Q9H8M2 LRPPRC-202ENST00000409659 1610 ntTSL 5 BASIC19.2■□□□□ 0.66
BRD9Q9H8M2 AL360181.3-201ENST00000468317 1605 ntAPPRIS P1 TSL 5 BASIC19.2■□□□□ 0.66
BRD9Q9H8M2 HAUS4-218ENST00000555986 1626 ntTSL 5 BASIC19.2■□□□□ 0.66
BRD9Q9H8M2 FOXD4-201ENST00000382500 1974 ntAPPRIS P1 BASIC19.2■□□□□ 0.66
BRD9Q9H8M2 MED25-201ENST00000312865 2332 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
BRD9Q9H8M2 ZNF282-204ENST00000610704 3722 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
BRD9Q9H8M2 LUC7L-201ENST00000293872 1456 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
BRD9Q9H8M2 IFRD1-201ENST00000005558 1834 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
BRD9Q9H8M2 DGKZ-203ENST00000421244 2862 ntAPPRIS ALT2 TSL 1 (best) BASIC19.2■□□□□ 0.66
BRD9Q9H8M2 EARS2-210ENST00000564501 2027 ntTSL 5 BASIC19.2■□□□□ 0.66
BRD9Q9H8M2 GRB10-201ENST00000335866 5032 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
BRD9Q9H8M2 KRT1-201ENST00000252244 2451 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
BRD9Q9H8M2 CDH5-204ENST00000563425 1932 ntTSL 5 BASIC19.19■□□□□ 0.66
BRD9Q9H8M2 MYBL2-202ENST00000396863 2704 ntTSL 2 BASIC19.19■□□□□ 0.66
BRD9Q9H8M2 NFIB-207ENST00000397579 3129 ntTSL 5 BASIC19.19■□□□□ 0.66
BRD9Q9H8M2 ARID3C-201ENST00000378909 1411 ntAPPRIS P1 TSL 2 BASIC19.19■□□□□ 0.66
BRD9Q9H8M2 CDK10-208ENST00000505473 1424 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
BRD9Q9H8M2 ABHD14B-202ENST00000361143 1636 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
BRD9Q9H8M2 ASL-205ENST00000395332 1622 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
BRD9Q9H8M2 CKLF-202ENST00000345436 571 ntAPPRIS ALT2 TSL 1 (best) BASIC19.19■□□□□ 0.66
BRD9Q9H8M2 GNG5-202ENST00000370645 790 ntAPPRIS P1 TSL 2 BASIC19.19■□□□□ 0.66
BRD9Q9H8M2 PSMA7-203ENST00000370873 996 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
BRD9Q9H8M2 PMEPA1-204ENST00000395814 800 ntTSL 3 BASIC19.19■□□□□ 0.66
BRD9Q9H8M2 ITM2C-204ENST00000409704 1106 ntTSL 5 BASIC19.19■□□□□ 0.66
BRD9Q9H8M2 AKR7L-201ENST00000420396 1240 ntAPPRIS ALT2 TSL 5 BASIC19.19■□□□□ 0.66
BRD9Q9H8M2 PCAT7-201ENST00000452148 1164 ntTSL 2 BASIC19.19■□□□□ 0.66
BRD9Q9H8M2 KRT18P31-201ENST00000506277 1292 ntBASIC19.19■□□□□ 0.66
BRD9Q9H8M2 GSTZ1-218ENST00000557053 580 ntTSL 3 BASIC19.19■□□□□ 0.66
BRD9Q9H8M2 CARHSP1-205ENST00000562843 843 ntTSL 2 BASIC19.19■□□□□ 0.66
BRD9Q9H8M2 SRSF1-209ENST00000585096 568 ntTSL 4 BASIC19.19■□□□□ 0.66
BRD9Q9H8M2 MIR2117HG-201ENST00000588060 506 ntTSL 4 BASIC19.19■□□□□ 0.66
BRD9Q9H8M2 AC005332.3-201ENST00000589904 676 ntBASIC19.19■□□□□ 0.66
BRD9Q9H8M2 CDK2AP1-207ENST00000618072 1144 ntTSL 3 BASIC19.19■□□□□ 0.66
BRD9Q9H8M2 SLC9A6-202ENST00000370698 4631 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
BRD9Q9H8M2 RASSF1-202ENST00000357043 1864 ntAPPRIS P3 TSL 1 (best) BASIC19.19■□□□□ 0.66
BRD9Q9H8M2 ACD-201ENST00000219251 2052 ntAPPRIS P3 TSL 2 BASIC19.19■□□□□ 0.66
BRD9Q9H8M2 SOX2-201ENST00000325404 2513 ntAPPRIS P1 BASIC19.19■□□□□ 0.66
BRD9Q9H8M2 FAM76B-204ENST00000536839 2546 ntAPPRIS ALT1 TSL 5 BASIC19.19■□□□□ 0.66
BRD9Q9H8M2 TM9SF1-203ENST00000524835 1938 ntTSL 2 BASIC19.19■□□□□ 0.66
BRD9Q9H8M2 TBC1D2B-202ENST00000409931 6086 ntAPPRIS P3 TSL 1 (best) BASIC19.19■□□□□ 0.66
BRD9Q9H8M2 SHOX2-203ENST00000441443 3038 ntAPPRIS ALT2 TSL 5 BASIC19.19■□□□□ 0.66
BRD9Q9H8M2 ZDHHC18-202ENST00000374142 5020 ntAPPRIS P2 TSL 1 (best) BASIC19.18■□□□□ 0.66
BRD9Q9H8M2 PCSK6-214ENST00000611716 4409 ntAPPRIS P4 TSL 1 (best) BASIC19.18■□□□□ 0.66
BRD9Q9H8M2 PCID2-202ENST00000337344 1898 ntAPPRIS P1 TSL 2 BASIC19.18■□□□□ 0.66
BRD9Q9H8M2 C21orf58-205ENST00000397683 1674 ntAPPRIS ALT2 TSL 2 BASIC19.18■□□□□ 0.66
BRD9Q9H8M2 PTGER2-201ENST00000245457 2383 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
BRD9Q9H8M2 SLC25A3-201ENST00000188376 1909 ntAPPRIS ALT1 TSL 1 (best) BASIC19.18■□□□□ 0.66
BRD9Q9H8M2 NECAB3-202ENST00000375238 1942 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
BRD9Q9H8M2 SREBF2-209ENST00000612482 5365 ntTSL 5 BASIC19.18■□□□□ 0.66
BRD9Q9H8M2 KANSL1-218ENST00000638275 5352 ntTSL 5 BASIC19.18■□□□□ 0.66
BRD9Q9H8M2 TBL1Y-203ENST00000383032 2407 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
BRD9Q9H8M2 VKORC1-205ENST00000394975 1012 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
BRD9Q9H8M2 ELP6-205ENST00000439305 880 ntTSL 2 BASIC19.18■□□□□ 0.66
BRD9Q9H8M2 AP001625.2-201ENST00000442605 575 ntTSL 2 BASIC19.18■□□□□ 0.66
BRD9Q9H8M2 AL611929.1-201ENST00000457340 449 ntTSL 3 BASIC19.18■□□□□ 0.66
BRD9Q9H8M2 AC073111.4-202ENST00000486297 585 ntTSL 4 BASIC19.18■□□□□ 0.66
BRD9Q9H8M2 AL160237.2-201ENST00000556165 472 ntBASIC19.18■□□□□ 0.66
BRD9Q9H8M2 RPL19-204ENST00000579260 1051 ntAPPRIS ALT1 TSL 2 BASIC19.18■□□□□ 0.66
BRD9Q9H8M2 SMIM22-203ENST00000588500 525 ntAPPRIS ALT2 TSL 1 (best) BASIC19.18■□□□□ 0.66
BRD9Q9H8M2 CYP1B1-AS1-214ENST00000620177 554 ntTSL 4 BASIC19.18■□□□□ 0.66
BRD9Q9H8M2 AC007952.6-201ENST00000573168 2673 ntBASIC19.18■□□□□ 0.66
BRD9Q9H8M2 AC003957.1-201ENST00000625108 2673 ntBASIC19.18■□□□□ 0.66
BRD9Q9H8M2 ANTXR1-203ENST00000409829 2221 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
BRD9Q9H8M2 ERCC2-205ENST00000485403 1538 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
BRD9Q9H8M2 ZNF843-203ENST00000618063 1765 ntAPPRIS P2 TSL 1 (best) BASIC19.18■□□□□ 0.66
BRD9Q9H8M2 FXR2-201ENST00000250113 2957 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
BRD9Q9H8M2 FUCA1-201ENST00000374479 2047 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
BRD9Q9H8M2 TAX1BP3-202ENST00000611779 1302 ntTSL 2 BASIC19.18■□□□□ 0.66
BRD9Q9H8M2 THOP1-202ENST00000395212 1877 ntTSL 2 BASIC19.18■□□□□ 0.66
BRD9Q9H8M2 PPP1R3F-201ENST00000055335 3421 ntAPPRIS P1 TSL 2 BASIC19.18■□□□□ 0.66
BRD9Q9H8M2 AKIRIN2-201ENST00000257787 1662 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
BRD9Q9H8M2 CDK4-202ENST00000312990 1650 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
BRD9Q9H8M2 CD7-206ENST00000583376 1659 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
BRD9Q9H8M2 WDR45-205ENST00000376358 1432 ntTSL 2 BASIC19.17■□□□□ 0.66
Retrieved 100 of 98,524 protein–RNA pairs in 24.5 ms